RNA–Protein interactions for RNA: ENST00000619550.4

HNF4A-209, Transcript of hepatocyte nuclear factor 4 alpha, humanhuman

TSL 5 BASIC

Gene HNF4A, Length 4,763 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4A-209ENST00000619550 SPDYE3A6NKU9 549 aa12.2□□□□□ -0.46
HNF4A-209ENST00000619550 TBCAO75347 108 aaKnown RBP12.2□□□□□ -0.46
HNF4A-209ENST00000619550 NECTIN1Q15223 517 aa12.2□□□□□ -0.46
HNF4A-209ENST00000619550 QTRT2Q9H974 415 aaKnown RBP12.2□□□□□ -0.46
HNF4A-209ENST00000619550 ERCC5P28715 1186 aaPredicted RBP12.19□□□□□ -0.46
HNF4A-209ENST00000619550 PDIA3P30101 505 aaKnown RBP12.19□□□□□ -0.46
HNF4A-209ENST00000619550 HEATR3Q7Z4Q2 680 aa12.19□□□□□ -0.46
HNF4A-209ENST00000619550 LARGE2Q8N3Y3 721 aa12.19□□□□□ -0.46
HNF4A-209ENST00000619550 ZBTB38Q8NAP3 1195 aaPredicted RBP12.19□□□□□ -0.46
HNF4A-209ENST00000619550 LINC00301Q8NCQ3 95 aa12.19□□□□□ -0.46
HNF4A-209ENST00000619550 CEP63Q96MT8 703 aa12.19□□□□□ -0.46
HNF4A-209ENST00000619550 VCX3BQ9H321 246 aa12.19□□□□□ -0.46
HNF4A-209ENST00000619550 VCX3AQ9NNX9 186 aa12.19□□□□□ -0.46
HNF4A-209ENST00000619550 EPN1Q9Y6I3 576 aaPredicted RBP12.19□□□□□ -0.46
HNF4A-209ENST00000619550 KDRP35968 1356 aa12.19□□□□□ -0.46
HNF4A-209ENST00000619550 TCP1P17987 556 aaKnown RBP12.19□□□□□ -0.46
HNF4A-209ENST00000619550 ATP5DP30049 168 aa12.19□□□□□ -0.46
HNF4A-209ENST00000619550 ALDH3A1P30838 453 aa12.19□□□□□ -0.46
HNF4A-209ENST00000619550 INTS8Q75QN2 995 aaKnown RBP12.19□□□□□ -0.46
HNF4A-209ENST00000619550 NELFBQ8WX92 580 aa12.19□□□□□ -0.46
HNF4A-209ENST00000619550 TBC1D5Q92609 795 aa12.19□□□□□ -0.46
HNF4A-209ENST00000619550 PHKBQ93100 1093 aa12.19□□□□□ -0.46
HNF4A-209ENST00000619550 PPANQ9NQ55 473 aaKnown RBP12.19□□□□□ -0.46
HNF4A-209ENST00000619550 SMIM23A6NLE4 172 aa12.19□□□□□ -0.46
HNF4A-209ENST00000619550 RNF10Q8N5U6 811 aaKnown RBP12.19□□□□□ -0.46
HNF4A-209ENST00000619550 ABCB6Q9NP58 842 aa12.19□□□□□ -0.46
HNF4A-209ENST00000619550 MAPK8IP1Q9UQF2 711 aa12.19□□□□□ -0.46
HNF4A-209ENST00000619550 HIP1RO75146 1068 aa12.19□□□□□ -0.46
HNF4A-209ENST00000619550 ATP1A2P50993 1020 aa12.19□□□□□ -0.46
HNF4A-209ENST00000619550 NBPF9Q3BBW0 867 aa12.19□□□□□ -0.46
HNF4A-209ENST00000619550 TMC4Q7Z404 712 aa12.19□□□□□ -0.46
HNF4A-209ENST00000619550 EDC3Q96F86 508 aaKnown RBP12.19□□□□□ -0.46
HNF4A-209ENST00000619550 GBP5Q96PP8 586 aa12.19□□□□□ -0.46
HNF4A-209ENST00000619550 LARSQ9P2J5 1176 aaKnown RBP12.19□□□□□ -0.46
HNF4A-209ENST00000619550 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.19□□□□□ -0.46
HNF4A-209ENST00000619550 POLR1AO95602 1720 aaPredicted RBP12.19□□□□□ -0.46
HNF4A-209ENST00000619550 REREQ9P2R6 1566 aa12.18□□□□□ -0.46
HNF4A-209ENST00000619550 PPP6R2O75170 966 aa12.18□□□□□ -0.46
HNF4A-209ENST00000619550 GKAP1Q5VSY0 366 aaPredicted RBP12.18□□□□□ -0.46
HNF4A-209ENST00000619550 STMN2Q93045 179 aa12.18□□□□□ -0.46
HNF4A-209ENST00000619550 RAB3IPQ96QF0 476 aaPredicted RBP12.18□□□□□ -0.46
HNF4A-209ENST00000619550 IFIH1Q9BYX4 1025 aaKnown RBP12.18□□□□□ -0.46
HNF4A-209ENST00000619550 HYOU1Q9Y4L1 999 aa12.18□□□□□ -0.46
HNF4A-209ENST00000619550 CDC42BPBQ9Y5S2 1711 aa12.18□□□□□ -0.46
HNF4A-209ENST00000619550 PRR36Q9H6K5 1346 aa12.18□□□□□ -0.46
HNF4A-209ENST00000619550 GYS2P54840 703 aa12.18□□□□□ -0.46
HNF4A-209ENST00000619550 GOLGA8FQ08AF8 430 aa12.18□□□□□ -0.46
HNF4A-209ENST00000619550 GOLGA8DPQ0D2H9 430 aa12.18□□□□□ -0.46
HNF4A-209ENST00000619550 BEND3Q5T5X7 828 aa12.18□□□□□ -0.46
HNF4A-209ENST00000619550 MAP3K15Q6ZN16 1313 aa12.18□□□□□ -0.46
HNF4A-209ENST00000619550 GPAA1O43292 621 aa12.18□□□□□ -0.46
HNF4A-209ENST00000619550 SMIM24O75264 130 aa12.18□□□□□ -0.46
HNF4A-209ENST00000619550 CTSWP56202 376 aa12.18□□□□□ -0.46
HNF4A-209ENST00000619550 SEPT14Q6ZU15 432 aa12.18□□□□□ -0.46
HNF4A-209ENST00000619550 CEP128Q6ZU80 1094 aa12.18□□□□□ -0.46
HNF4A-209ENST00000619550 CNKSR1Q969H4 720 aa12.18□□□□□ -0.46
HNF4A-209ENST00000619550 SEC62Q99442 399 aaKnown RBP12.18□□□□□ -0.46
HNF4A-209ENST00000619550 NAP1L3Q99457 506 aaPredicted RBP12.18□□□□□ -0.46
HNF4A-209ENST00000619550 ZCCHC17Q9NP64 241 aaKnown RBP12.18□□□□□ -0.46
HNF4A-209ENST00000619550 CCDC160A6NGH7 325 aa12.18□□□□□ -0.46
HNF4A-209ENST00000619550 VWA3BQ502W6 1294 aa12.18□□□□□ -0.46
HNF4A-209ENST00000619550 PGBD1Q96JS3 809 aa12.18□□□□□ -0.46
HNF4A-209ENST00000619550 ZNF827Q17R98 1081 aa12.17□□□□□ -0.46
HNF4A-209ENST00000619550 SLC4A8Q2Y0W8 1093 aa12.17□□□□□ -0.46
HNF4A-209ENST00000619550 SLC9C1Q4G0N8 1177 aa12.17□□□□□ -0.46
HNF4A-209ENST00000619550 CCDC84Q86UT8 332 aaPredicted RBP12.17□□□□□ -0.46
HNF4A-209ENST00000619550 NOSTRINQ8IVI9 506 aa12.17□□□□□ -0.46
HNF4A-209ENST00000619550 PI4K2BQ8TCG2 481 aa12.17□□□□□ -0.46
HNF4A-209ENST00000619550 PSMB7Q99436 277 aa12.17□□□□□ -0.46
HNF4A-209ENST00000619550 FTOQ9C0B1 505 aaKnown RBP eCLIP12.17□□□□□ -0.465e-7■■■■□ 19.6
HNF4A-209ENST00000619550 ARHGEF10LQ9HCE6 1279 aa12.17□□□□□ -0.46
HNF4A-209ENST00000619550 DONSONQ9NYP3 566 aa12.17□□□□□ -0.46
HNF4A-209ENST00000619550 FAM184BQ9ULE4 1060 aa12.17□□□□□ -0.46
HNF4A-209ENST00000619550 NDUFB9Q9Y6M9 179 aa12.17□□□□□ -0.46
HNF4A-209ENST00000619550 KCNJ18B7U540 433 aa12.17□□□□□ -0.46
HNF4A-209ENST00000619550 ACTN4O43707 911 aaKnown RBP12.17□□□□□ -0.46
HNF4A-209ENST00000619550 ATP2B4P23634 1241 aa12.17□□□□□ -0.46
HNF4A-209ENST00000619550 CASP14P31944 242 aa12.17□□□□□ -0.46
HNF4A-209ENST00000619550 PDE4DQ08499 809 aa12.17□□□□□ -0.46
HNF4A-209ENST00000619550 KCNJ12Q14500 433 aa12.17□□□□□ -0.46
HNF4A-209ENST00000619550 TTC38Q5R3I4 469 aa12.17□□□□□ -0.46
HNF4A-209ENST00000619550 BPIFA3Q9BQP9 254 aa12.17□□□□□ -0.46
HNF4A-209ENST00000619550 KCNK9Q9NPC2 374 aa12.17□□□□□ -0.46
HNF4A-209ENST00000619550 UTP11Q9Y3A2 253 aaKnown RBP12.17□□□□□ -0.46
HNF4A-209ENST00000619550 SPATA31A3Q5VYP0 1347 aa12.17□□□□□ -0.46
HNF4A-209ENST00000619550 KCNJ6P48051 423 aa12.17□□□□□ -0.46
HNF4A-209ENST00000619550 RBM26Q5T8P6 1007 aaKnown RBP12.17□□□□□ -0.46
HNF4A-209ENST00000619550 CPSF1Q10570 1443 aaKnown RBP12.17□□□□□ -0.46
HNF4A-209ENST00000619550 SYCP3Q8IZU3 236 aa12.17□□□□□ -0.46
HNF4A-209ENST00000619550 ENOX1Q8TC92 643 aaKnown RBP12.17□□□□□ -0.46
HNF4A-209ENST00000619550 PANX2Q96RD6 677 aa12.17□□□□□ -0.46
HNF4A-209ENST00000619550 BATF3Q9NR55 127 aa12.17□□□□□ -0.46
HNF4A-209ENST00000619550 CARMIL3Q8ND23 1372 aa12.16□□□□□ -0.46
HNF4A-209ENST00000619550 PARP1P09874 1014 aaKnown RBP12.16□□□□□ -0.46
HNF4A-209ENST00000619550 CALCOCO2Q13137 446 aa12.16□□□□□ -0.46
HNF4A-209ENST00000619550 PPP1R7Q15435 360 aa12.16□□□□□ -0.46
HNF4A-209ENST00000619550 KRT71Q3SY84 523 aa12.16□□□□□ -0.46
HNF4A-209ENST00000619550 KRT79Q5XKE5 535 aa12.16□□□□□ -0.46
HNF4A-209ENST00000619550 CNNM4Q6P4Q7 775 aa12.16□□□□□ -0.46
HNF4A-209ENST00000619550 NIM1KQ8IY84 436 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms