RNA–Protein interactions for RNA: ENST00000618553.1

APOBEC3A-205, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOBEC3A, Length 1,103 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3A-205ENST00000618553 SYNE3Q6ZMZ3 975 aa15.3■□□□□ 0.04
APOBEC3A-205ENST00000618553 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.3■□□□□ 0.04
APOBEC3A-205ENST00000618553 CLEC10AQ8IUN9 316 aa15.3■□□□□ 0.04
APOBEC3A-205ENST00000618553 GMCL1P1Q8NEA9 526 aa15.3■□□□□ 0.04
APOBEC3A-205ENST00000618553 WDR18Q9BV38 432 aa15.3■□□□□ 0.04
APOBEC3A-205ENST00000618553 SLKQ9H2G2 1235 aaPredicted RBP15.3■□□□□ 0.04
APOBEC3A-205ENST00000618553 TMX2Q9Y320 296 aa15.3■□□□□ 0.04
APOBEC3A-205ENST00000618553 FAM155AB1AL88 458 aaPredicted RBP15.29■□□□□ 0.04
APOBEC3A-205ENST00000618553 MAP3K9P80192 1104 aa15.29■□□□□ 0.04
APOBEC3A-205ENST00000618553 SCRN1Q12765 414 aa15.29■□□□□ 0.04
APOBEC3A-205ENST00000618553 NOGQ13253 232 aa15.29■□□□□ 0.04
APOBEC3A-205ENST00000618553 RAB3GAP1Q15042 981 aa15.29■□□□□ 0.04
APOBEC3A-205ENST00000618553 LDLRAD1Q5T700 205 aa15.29■□□□□ 0.04
APOBEC3A-205ENST00000618553 NOL8Q76FK4 1167 aaKnown RBP15.29■□□□□ 0.04
APOBEC3A-205ENST00000618553 MICU3Q86XE3 530 aa15.29■□□□□ 0.04
APOBEC3A-205ENST00000618553 LARP6Q9BRS8 491 aaKnown RBP15.29■□□□□ 0.04
APOBEC3A-205ENST00000618553 LLPHQ9BRT6 129 aaKnown RBP15.29■□□□□ 0.04
APOBEC3A-205ENST00000618553 SH2D4AQ9H788 454 aa15.29■□□□□ 0.04
APOBEC3A-205ENST00000618553 ARHGEF10LQ9HCE6 1279 aa15.29■□□□□ 0.04
APOBEC3A-205ENST00000618553 FAM217BQ9NTX9 383 aaPredicted RBP15.29■□□□□ 0.04
APOBEC3A-205ENST00000618553 CLIP2Q9UDT6 1046 aa15.29■□□□□ 0.04
APOBEC3A-205ENST00000618553 SNCAIPQ9Y6H5 919 aa15.29■□□□□ 0.04
APOBEC3A-205ENST00000618553 MYH6P13533 1939 aa15.29■□□□□ 0.04
APOBEC3A-205ENST00000618553 LOC285556D6RIA3 1793 aa15.29■□□□□ 0.04
APOBEC3A-205ENST00000618553 CCDC196A0A1B0GTZ2 297 aa15.28■□□□□ 0.04
APOBEC3A-205ENST00000618553 TTLL13PA6NNM8 815 aa15.28■□□□□ 0.04
APOBEC3A-205ENST00000618553 GOLGA8AA7E2F4 631 aa15.28■□□□□ 0.04
APOBEC3A-205ENST00000618553 USP17L5A8MUK1 530 aa15.28■□□□□ 0.04
APOBEC3A-205ENST00000618553 DHX16O60231 1041 aaKnown RBP15.28■□□□□ 0.04
APOBEC3A-205ENST00000618553 PTPRAP18433 802 aa15.28■□□□□ 0.04
APOBEC3A-205ENST00000618553 METAP2P50579 478 aaKnown RBP eCLIP15.28■□□□□ 0.04
APOBEC3A-205ENST00000618553 VGLL4Q14135 290 aa15.28■□□□□ 0.04
APOBEC3A-205ENST00000618553 GRM4Q14833 912 aa15.28■□□□□ 0.04
APOBEC3A-205ENST00000618553 ARMC9Q7Z3E5 817 aa15.28■□□□□ 0.04
APOBEC3A-205ENST00000618553 ANKRD13AQ8IZ07 590 aa15.28■□□□□ 0.04
APOBEC3A-205ENST00000618553 FANCBQ8NB91 859 aa15.28■□□□□ 0.04
APOBEC3A-205ENST00000618553 KIAA1683Q9H0B3 1180 aa15.28■□□□□ 0.04
APOBEC3A-205ENST00000618553 PLSCR2Q9NRY7 297 aa15.28■□□□□ 0.04
APOBEC3A-205ENST00000618553 RBM28Q9NW13 759 aaKnown RBP15.28■□□□□ 0.04
APOBEC3A-205ENST00000618553 PARP14Q460N5 1801 aa15.27■□□□□ 0.04
APOBEC3A-205ENST00000618553 A0A1W2PRG0 241 aa15.27■□□□□ 0.04
APOBEC3A-205ENST00000618553 PDHBP11177 359 aa15.27■□□□□ 0.04
APOBEC3A-205ENST00000618553 KIF5BP33176 963 aa15.27■□□□□ 0.04
APOBEC3A-205ENST00000618553 SOX10P56693 466 aa15.27■□□□□ 0.04
APOBEC3A-205ENST00000618553 NTRK3Q16288 839 aa15.27■□□□□ 0.04
APOBEC3A-205ENST00000618553 RTN1Q16799 776 aa15.27■□□□□ 0.04
APOBEC3A-205ENST00000618553 SMARCC2Q8TAQ2 1214 aa15.27■□□□□ 0.04
APOBEC3A-205ENST00000618553 ZKSCAN4Q969J2 545 aaPredicted RBP15.27■□□□□ 0.04
APOBEC3A-205ENST00000618553 GMCL1Q96IK5 515 aa15.27■□□□□ 0.04
APOBEC3A-205ENST00000618553 MYL10Q9BUA6 226 aa15.27■□□□□ 0.04
APOBEC3A-205ENST00000618553 PICK1Q9NRD5 415 aa15.27■□□□□ 0.04
APOBEC3A-205ENST00000618553 CSADQ9Y600 493 aa15.27■□□□□ 0.04
APOBEC3A-205ENST00000618553 PALM3A6NDB9 673 aaPredicted RBP15.26■□□□□ 0.03
APOBEC3A-205ENST00000618553 IFNAR1P17181 557 aa15.26■□□□□ 0.03
APOBEC3A-205ENST00000618553 SMARCA1P28370 1054 aa15.26■□□□□ 0.03
APOBEC3A-205ENST00000618553 CDC27P30260 824 aa15.26■□□□□ 0.03
APOBEC3A-205ENST00000618553 KIF23Q02241 960 aaPredicted RBP15.26■□□□□ 0.03
APOBEC3A-205ENST00000618553 FUT2Q10981 343 aa15.26■□□□□ 0.03
APOBEC3A-205ENST00000618553 ASPRV1Q53RT3 343 aa15.26■□□□□ 0.03
APOBEC3A-205ENST00000618553 RGMBQ6NW40 437 aa15.26■□□□□ 0.03
APOBEC3A-205ENST00000618553 CCDC83Q8IWF9 413 aa15.26■□□□□ 0.03
APOBEC3A-205ENST00000618553 LRRC47Q8N1G4 583 aaKnown RBP15.26■□□□□ 0.03
APOBEC3A-205ENST00000618553 NECAB1Q8N987 351 aa15.26■□□□□ 0.03
APOBEC3A-205ENST00000618553 NSUN7Q8NE18 718 aaKnown RBP15.26■□□□□ 0.03
APOBEC3A-205ENST00000618553 CTCFLQ8NI51 663 aaPredicted RBP15.26■□□□□ 0.03
APOBEC3A-205ENST00000618553 DCAF4Q8WV16 495 aa15.26■□□□□ 0.03
APOBEC3A-205ENST00000618553 VCPKMTQ9H867 229 aa15.26■□□□□ 0.03
APOBEC3A-205ENST00000618553 AS3MTQ9HBK9 375 aa15.26■□□□□ 0.03
APOBEC3A-205ENST00000618553 FZD1Q9UP38 647 aa15.26■□□□□ 0.03
APOBEC3A-205ENST00000618553 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.26■□□□□ 0.03
APOBEC3A-205ENST00000618553 STK36Q9NRP7 1315 aa15.25■□□□□ 0.03
APOBEC3A-205ENST00000618553 POTEMA6NI47 508 aa15.25■□□□□ 0.03
APOBEC3A-205ENST00000618553 SPDYE5A6NIY4 337 aa15.25■□□□□ 0.03
APOBEC3A-205ENST00000618553 CTDNEP1O95476 244 aa15.25■□□□□ 0.03
APOBEC3A-205ENST00000618553 GNAQP50148 359 aa15.25■□□□□ 0.03
APOBEC3A-205ENST00000618553 ZNF543Q08ER8 600 aa15.25■□□□□ 0.03
APOBEC3A-205ENST00000618553 STK3Q13188 491 aa15.25■□□□□ 0.03
APOBEC3A-205ENST00000618553 GPATCH4Q5T3I0 446 aaKnown RBP15.25■□□□□ 0.03
APOBEC3A-205ENST00000618553 TMTC3Q6ZXV5 915 aa15.25■□□□□ 0.03
APOBEC3A-205ENST00000618553 ERO1BQ86YB8 467 aa15.25■□□□□ 0.03
APOBEC3A-205ENST00000618553 ACER1Q8TDN7 264 aa15.25■□□□□ 0.03
APOBEC3A-205ENST00000618553 LPAR1Q92633 364 aa15.25■□□□□ 0.03
APOBEC3A-205ENST00000618553 C12orf42Q96LP6 360 aa15.25■□□□□ 0.03
APOBEC3A-205ENST00000618553 LZTS2Q9BRK4 669 aa15.25■□□□□ 0.03
APOBEC3A-205ENST00000618553 NCOA5Q9HCD5 579 aaKnown RBP15.25■□□□□ 0.03
APOBEC3A-205ENST00000618553 GBA2Q9HCG7 927 aaPredicted RBP15.25■□□□□ 0.03
APOBEC3A-205ENST00000618553 GOPCQ9HD26 462 aa15.25■□□□□ 0.03
APOBEC3A-205ENST00000618553 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.25■□□□□ 0.03
APOBEC3A-205ENST00000618553 MAD2L2Q9UI95 211 aa15.25■□□□□ 0.03
APOBEC3A-205ENST00000618553 COLQQ9Y215 455 aaPredicted RBP15.25■□□□□ 0.03
APOBEC3A-205ENST00000618553 F5H6K3 240 aa15.24■□□□□ 0.03
APOBEC3A-205ENST00000618553 TRPA1O75762 1119 aa15.24■□□□□ 0.03
APOBEC3A-205ENST00000618553 CDKL5O76039 1030 aa15.24■□□□□ 0.03
APOBEC3A-205ENST00000618553 NDUFB10O96000 172 aa15.24■□□□□ 0.03
APOBEC3A-205ENST00000618553 RXRAP19793 462 aa15.24■□□□□ 0.03
APOBEC3A-205ENST00000618553 DDIT3P35638 169 aa15.24■□□□□ 0.03
APOBEC3A-205ENST00000618553 USP14P54578 494 aa15.24■□□□□ 0.03
APOBEC3A-205ENST00000618553 CCT2P78371 535 aaKnown RBP15.24■□□□□ 0.03
APOBEC3A-205ENST00000618553 HMGN5P82970 282 aaKnown RBP15.24■□□□□ 0.03
APOBEC3A-205ENST00000618553 PPATQ06203 517 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms