RNA–Protein interactions for RNA: ENST00000618534.4

NEK3-208, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene NEK3, Length 2,414 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-208ENST00000618534 SUGCTQ9HAC7 445 aa23.04■■□□□ 1.28
NEK3-208ENST00000618534 ABCB6Q9NP58 842 aa23.04■■□□□ 1.28
NEK3-208ENST00000618534 BTG4Q9NY30 223 aa23.04■■□□□ 1.28
NEK3-208ENST00000618534 DISP2A7MBM2 1401 aa23.04■■□□□ 1.28
NEK3-208ENST00000618534 KCNJ18B7U540 433 aa23.03■■□□□ 1.28
NEK3-208ENST00000618534 ADAMTS3O15072 1205 aa23.03■■□□□ 1.28
NEK3-208ENST00000618534 CALM1P0DP23 149 aa23.03■■□□□ 1.28
NEK3-208ENST00000618534 CALM2P0DP24 149 aa23.03■■□□□ 1.28
NEK3-208ENST00000618534 CALM3P0DP25 149 aa23.03■■□□□ 1.28
NEK3-208ENST00000618534 MCM7P33993 719 aa23.03■■□□□ 1.28
NEK3-208ENST00000618534 KCNJ12Q14500 433 aa23.03■■□□□ 1.28
NEK3-208ENST00000618534 HDXQ7Z353 690 aa23.03■■□□□ 1.28
NEK3-208ENST00000618534 BAZ2BQ9UIF8 2168 aaKnown RBP23.03■■□□□ 1.28
NEK3-208ENST00000618534 CACNA1SQ13698 1873 aa23.03■■□□□ 1.28
NEK3-208ENST00000618534 DLEC1Q9Y238 1755 aa23.03■■□□□ 1.28
NEK3-208ENST00000618534 WTIPA6NIX2 430 aaPredicted RBP23.03■■□□□ 1.28
NEK3-208ENST00000618534 DDAH1O94760 285 aa23.03■■□□□ 1.28
NEK3-208ENST00000618534 EVX2Q03828 476 aa23.03■■□□□ 1.28
NEK3-208ENST00000618534 SPAG1Q07617 926 aa23.03■■□□□ 1.28
NEK3-208ENST00000618534 EXOC4Q96A65 974 aa23.03■■□□□ 1.28
NEK3-208ENST00000618534 MAPK8IP1Q9UQF2 711 aa23.03■■□□□ 1.28
NEK3-208ENST00000618534 ZNF804BA4D1E1 1349 aa23.03■■□□□ 1.28
NEK3-208ENST00000618534 KRT9P35527 623 aa23.02■■□□□ 1.28
NEK3-208ENST00000618534 VSNL1P62760 191 aa23.02■■□□□ 1.28
NEK3-208ENST00000618534 WHAMMP3Q1A5X7 153 aa23.02■■□□□ 1.28
NEK3-208ENST00000618534 MUM1L1Q5H9M0 696 aa23.02■■□□□ 1.28
NEK3-208ENST00000618534 PHLPP1O60346 1717 aa23.02■■□□□ 1.28
NEK3-208ENST00000618534 CTAGE15A4D2H0 777 aa23.02■■□□□ 1.28
NEK3-208ENST00000618534 ERLIN1O75477 346 aa23.02■■□□□ 1.28
NEK3-208ENST00000618534 CTAGE8P0CG41 777 aa23.02■■□□□ 1.28
NEK3-208ENST00000618534 TRIM14Q14142 442 aa23.02■■□□□ 1.28
NEK3-208ENST00000618534 CTAGE6Q86UF2 777 aa23.02■■□□□ 1.28
NEK3-208ENST00000618534 CTAGE4Q8IX94 777 aa23.02■■□□□ 1.28
NEK3-208ENST00000618534 BRIP1Q9BX63 1249 aa23.02■■□□□ 1.28
NEK3-208ENST00000618534 L1RE1Q9UN81 338 aa23.02■■□□□ 1.28
NEK3-208ENST00000618534 GDAQ9Y2T3 454 aa23.02■■□□□ 1.28
NEK3-208ENST00000618534 NMT2O60551 498 aa23.01■■□□□ 1.27
NEK3-208ENST00000618534 CAPN2P17655 700 aa23.01■■□□□ 1.27
NEK3-208ENST00000618534 LMAN1P49257 510 aa23.01■■□□□ 1.27
NEK3-208ENST00000618534 NLRP5P59047 1200 aa23.01■■□□□ 1.27
NEK3-208ENST00000618534 RAD51AP2Q09MP3 1159 aa23.01■■□□□ 1.27
NEK3-208ENST00000618534 ZNF658Q5TYW1 1059 aaPredicted RBP23.01■■□□□ 1.27
NEK3-208ENST00000618534 WWC2Q6AWC2 1192 aa23.01■■□□□ 1.27
NEK3-208ENST00000618534 ANKRD20A12PQ8NF67 263 aa23.01■■□□□ 1.27
NEK3-208ENST00000618534 COL22A1Q8NFW1 1626 aaPredicted RBP23.01■■□□□ 1.27
NEK3-208ENST00000618534 A0A0U1RQG5 324 aaPredicted RBP23.01■■□□□ 1.27
NEK3-208ENST00000618534 VEGFAP15692 232 aaPredicted RBP23.01■■□□□ 1.27
NEK3-208ENST00000618534 CTR9Q6PD62 1173 aa23.01■■□□□ 1.27
NEK3-208ENST00000618534 CHP1Q99653 195 aa23.01■■□□□ 1.27
NEK3-208ENST00000618534 TMEM51Q9NW97 253 aa23.01■■□□□ 1.27
NEK3-208ENST00000618534 MYO1AQ9UBC5 1043 aa23.01■■□□□ 1.27
NEK3-208ENST00000618534 NTSR2O95665 410 aa23■■□□□ 1.27
NEK3-208ENST00000618534 RPN1P04843 607 aaKnown RBP23■■□□□ 1.27
NEK3-208ENST00000618534 ZSCAN26Q16670 478 aa23■■□□□ 1.27
NEK3-208ENST00000618534 INTS5Q6P9B9 1019 aaKnown RBP23■■□□□ 1.27
NEK3-208ENST00000618534 NOA1Q8NC60 698 aaKnown RBP23■■□□□ 1.27
NEK3-208ENST00000618534 PSD3Q9NYI0 1048 aa23■■□□□ 1.27
NEK3-208ENST00000618534 TRIM10Q9UDY6 481 aa23■■□□□ 1.27
NEK3-208ENST00000618534 N4BP1O75113 896 aaKnown RBP23■■□□□ 1.27
NEK3-208ENST00000618534 FGRP09769 529 aa23■■□□□ 1.27
NEK3-208ENST00000618534 SCG2P13521 617 aa23■■□□□ 1.27
NEK3-208ENST00000618534 TUBB4BP68371 445 aa23■■□□□ 1.27
NEK3-208ENST00000618534 AMPD2Q01433 879 aa23■■□□□ 1.27
NEK3-208ENST00000618534 UBXN1Q04323 297 aa23■■□□□ 1.27
NEK3-208ENST00000618534 CTCFLQ8NI51 663 aaPredicted RBP23■■□□□ 1.27
NEK3-208ENST00000618534 ZNF384Q8TF68 577 aa23■■□□□ 1.27
NEK3-208ENST00000618534 VPS18Q9P253 973 aa23■■□□□ 1.27
NEK3-208ENST00000618534 REXO2Q9Y3B8 237 aaKnown RBP23■■□□□ 1.27
NEK3-208ENST00000618534 PRCPP42785 496 aa22.99■■□□□ 1.27
NEK3-208ENST00000618534 HSPA2P54652 639 aa22.99■■□□□ 1.27
NEK3-208ENST00000618534 PIP4K2BP78356 416 aa22.99■■□□□ 1.27
NEK3-208ENST00000618534 NCAPH2Q6IBW4 605 aa22.99■■□□□ 1.27
NEK3-208ENST00000618534 PYM1Q9BRP8 204 aaKnown RBP22.99■■□□□ 1.27
NEK3-208ENST00000618534 MYO6Q9UM54 1294 aa22.99■■□□□ 1.27
NEK3-208ENST00000618534 USP17L12C9JPN9 530 aa22.99■■□□□ 1.27
NEK3-208ENST00000618534 USP17L21D6R901 530 aa22.99■■□□□ 1.27
NEK3-208ENST00000618534 CAMTA2O94983 1202 aa22.99■■□□□ 1.27
NEK3-208ENST00000618534 TRAPPC10P48553 1259 aa22.99■■□□□ 1.27
NEK3-208ENST00000618534 PARP10Q53GL7 1025 aa22.99■■□□□ 1.27
NEK3-208ENST00000618534 RMND1Q9NWS8 449 aa22.99■■□□□ 1.27
NEK3-208ENST00000618534 NIP7Q9Y221 180 aaKnown RBP eCLIP22.99■■□□□ 1.27
NEK3-208ENST00000618534 IRF2BP1Q8IU81 584 aa22.98■■□□□ 1.27
NEK3-208ENST00000618534 CCDC87Q9NVE4 849 aa22.98■■□□□ 1.27
NEK3-208ENST00000618534 GNL3LQ9NVN8 582 aaKnown RBP22.98■■□□□ 1.27
NEK3-208ENST00000618534 TRIM49BA6NDI0 452 aa22.98■■□□□ 1.27
NEK3-208ENST00000618534 FAM47AQ5JRC9 791 aa22.98■■□□□ 1.27
NEK3-208ENST00000618534 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.98■■□□□ 1.27
NEK3-208ENST00000618534 EPN1Q9Y6I3 576 aaPredicted RBP22.98■■□□□ 1.27
NEK3-208ENST00000618534 EIF3JO75822 258 aaKnown RBP22.97■■□□□ 1.27
NEK3-208ENST00000618534 NDUFA10O95299 355 aa22.97■■□□□ 1.27
NEK3-208ENST00000618534 GUCA1BQ9UMX6 200 aa22.97■■□□□ 1.27
NEK3-208ENST00000618534 A0A1B0GUL6 1792 aa22.97■■□□□ 1.27
NEK3-208ENST00000618534 TTC26A0AVF1 554 aa22.97■■□□□ 1.27
NEK3-208ENST00000618534 PARP1P09874 1014 aaKnown RBP22.97■■□□□ 1.27
NEK3-208ENST00000618534 PCP11498 1178 aaKnown RBP22.97■■□□□ 1.27
NEK3-208ENST00000618534 CRKLP46109 303 aaKnown RBP22.97■■□□□ 1.27
NEK3-208ENST00000618534 CASP8Q14790 479 aa22.97■■□□□ 1.27
NEK3-208ENST00000618534 PFKFB3Q16875 520 aaPredicted RBP22.97■■□□□ 1.27
NEK3-208ENST00000618534 LAMB2P55268 1798 aa22.96■■□□□ 1.27
NEK3-208ENST00000618534 STAT6P42226 847 aa22.96■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms