RNA–Protein interactions for RNA: ENST00000617757.1

TARDBP-219, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 434 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-219ENST00000617757 PPFIA3O75145 1194 aa9.38□□□□□ -0.91
TARDBP-219ENST00000617757 CDKL5O76039 1030 aa9.38□□□□□ -0.91
TARDBP-219ENST00000617757 CELF2O95319 508 aaKnown RBP9.38□□□□□ -0.91
TARDBP-219ENST00000617757 NDUFB10O96000 172 aa9.38□□□□□ -0.91
TARDBP-219ENST00000617757 GOLGA8HP0CJ92 632 aa9.38□□□□□ -0.91
TARDBP-219ENST00000617757 FDPSP14324 419 aaKnown RBP9.38□□□□□ -0.91
TARDBP-219ENST00000617757 DDIT3P35638 169 aa9.38□□□□□ -0.91
TARDBP-219ENST00000617757 GNAQP50148 359 aa9.38□□□□□ -0.91
TARDBP-219ENST00000617757 FKBP1BP68106 108 aa9.38□□□□□ -0.91
TARDBP-219ENST00000617757 HMGN5P82970 282 aaKnown RBP9.38□□□□□ -0.91
TARDBP-219ENST00000617757 SSRP1Q08945 709 aaKnown RBP9.38□□□□□ -0.91
TARDBP-219ENST00000617757 ZNF543Q08ER8 600 aa9.38□□□□□ -0.91
TARDBP-219ENST00000617757 FUT2Q10981 343 aa9.38□□□□□ -0.91
TARDBP-219ENST00000617757 SPP2Q13103 211 aa9.38□□□□□ -0.91
TARDBP-219ENST00000617757 ZYXQ15942 572 aaKnown RBP9.38□□□□□ -0.91
TARDBP-219ENST00000617757 ASPRV1Q53RT3 343 aa9.38□□□□□ -0.91
TARDBP-219ENST00000617757 KIAA1755Q5JYT7 1200 aa9.38□□□□□ -0.91
TARDBP-219ENST00000617757 CST9Q5W186 159 aa9.38□□□□□ -0.91
TARDBP-219ENST00000617757 NBPF11Q86T75 865 aa9.38□□□□□ -0.91
TARDBP-219ENST00000617757 CCDC82Q8N4S0 544 aa9.38□□□□□ -0.91
TARDBP-219ENST00000617757 SRBD1Q8N5C6 995 aaKnown RBP9.38□□□□□ -0.91
TARDBP-219ENST00000617757 ZNF280CQ8ND82 737 aa9.38□□□□□ -0.91
TARDBP-219ENST00000617757 PHKBQ93100 1093 aa9.38□□□□□ -0.91
TARDBP-219ENST00000617757 DDX11Q96FC9 970 aa9.38□□□□□ -0.91
TARDBP-219ENST00000617757 GMCL1Q96IK5 515 aa9.38□□□□□ -0.91
TARDBP-219ENST00000617757 CLMNQ96JQ2 1002 aa9.38□□□□□ -0.91
TARDBP-219ENST00000617757 ELP3Q9H9T3 547 aa9.38□□□□□ -0.91
TARDBP-219ENST00000617757 GBA2Q9HCG7 927 aaPredicted RBP9.38□□□□□ -0.91
TARDBP-219ENST00000617757 GOPCQ9HD26 462 aa9.38□□□□□ -0.91
TARDBP-219ENST00000617757 AFG3L2Q9Y4W6 797 aa9.38□□□□□ -0.91
TARDBP-219ENST00000617757 ZHX2Q9Y6X8 837 aa9.38□□□□□ -0.91
TARDBP-219ENST00000617757 FRMPD2Q68DX3 1309 aaPredicted RBP9.37□□□□□ -0.91
TARDBP-219ENST00000617757 PASKQ96RG2 1323 aa9.37□□□□□ -0.91
TARDBP-219ENST00000617757 STK36Q9NRP7 1315 aa9.37□□□□□ -0.91
TARDBP-219ENST00000617757 C19orf81C9J6K1 198 aa9.37□□□□□ -0.91
TARDBP-219ENST00000617757 KLRF2D3W0D1 207 aa9.37□□□□□ -0.91
TARDBP-219ENST00000617757 RAD21O60216 631 aa9.37□□□□□ -0.91
TARDBP-219ENST00000617757 FMNL1O95466 1100 aaPredicted RBP9.37□□□□□ -0.91
TARDBP-219ENST00000617757 BMP3P12645 472 aa9.37□□□□□ -0.91
TARDBP-219ENST00000617757 YY1P25490 414 aa9.37□□□□□ -0.91
TARDBP-219ENST00000617757 SMARCA1P28370 1054 aa9.37□□□□□ -0.91
TARDBP-219ENST00000617757 SLC1A4P43007 532 aa9.37□□□□□ -0.91
TARDBP-219ENST00000617757 USP14P54578 494 aa9.37□□□□□ -0.91
TARDBP-219ENST00000617757 BACE1P56817 501 aa9.37□□□□□ -0.91
TARDBP-219ENST00000617757 PPATQ06203 517 aa9.37□□□□□ -0.91
TARDBP-219ENST00000617757 CCDC96Q2M329 555 aa9.37□□□□□ -0.91
TARDBP-219ENST00000617757 GPATCH4Q5T3I0 446 aaKnown RBP9.37□□□□□ -0.91
TARDBP-219ENST00000617757 KCTD1Q719H9 257 aa9.37□□□□□ -0.91
TARDBP-219ENST00000617757 ERO1BQ86YB8 467 aa9.37□□□□□ -0.91
TARDBP-219ENST00000617757 C2orf69Q8N8R5 385 aa9.37□□□□□ -0.91
TARDBP-219ENST00000617757 FEZ1Q99689 392 aa9.37□□□□□ -0.91
TARDBP-219ENST00000617757 LZTS2Q9BRK4 669 aa9.37□□□□□ -0.91
TARDBP-219ENST00000617757 SLC26A6Q9BXS9 759 aa9.37□□□□□ -0.91
TARDBP-219ENST00000617757 RNF26Q9BY78 433 aaPredicted RBP9.37□□□□□ -0.91
TARDBP-219ENST00000617757 KIAA1683Q9H0B3 1180 aa9.37□□□□□ -0.91
TARDBP-219ENST00000617757 CPVLQ9H3G5 476 aa9.37□□□□□ -0.91
TARDBP-219ENST00000617757 GPCPD1Q9NPB8 672 aa9.37□□□□□ -0.91
TARDBP-219ENST00000617757 EMILIN3Q9NT22 766 aa9.37□□□□□ -0.91
TARDBP-219ENST00000617757 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.37□□□□□ -0.91
TARDBP-219ENST00000617757 ORC3Q9UBD5 711 aaPredicted RBP9.37□□□□□ -0.91
TARDBP-219ENST00000617757 SPDYE5A6NIY4 337 aa9.36□□□□□ -0.91
TARDBP-219ENST00000617757 TRIM75PA6NK02 468 aa9.36□□□□□ -0.91
TARDBP-219ENST00000617757 PRPF3O43395 683 aaKnown RBP9.36□□□□□ -0.91
TARDBP-219ENST00000617757 CYTH3O43739 400 aa9.36□□□□□ -0.91
TARDBP-219ENST00000617757 DGKZQ13574 1117 aa9.36□□□□□ -0.91
TARDBP-219ENST00000617757 MTMR2Q13614 643 aa9.36□□□□□ -0.91
TARDBP-219ENST00000617757 SLC35G1Q2M3R5 365 aa9.36□□□□□ -0.91
TARDBP-219ENST00000617757 SH3D19Q5HYK7 790 aa9.36□□□□□ -0.91
TARDBP-219ENST00000617757 TTBK2Q6IQ55 1244 aa9.36□□□□□ -0.91
TARDBP-219ENST00000617757 TRIM22Q8IYM9 498 aa9.36□□□□□ -0.91
TARDBP-219ENST00000617757 SPICE1Q8N0Z3 855 aa9.36□□□□□ -0.91
TARDBP-219ENST00000617757 FAM184AQ8NB25 1140 aa9.36□□□□□ -0.91
TARDBP-219ENST00000617757 SMC1BQ8NDV3 1235 aa9.36□□□□□ -0.91
TARDBP-219ENST00000617757 NUP88Q99567 741 aaPredicted RBP9.36□□□□□ -0.91
TARDBP-219ENST00000617757 SPZ1Q9BXG8 430 aa9.36□□□□□ -0.91
TARDBP-219ENST00000617757 UBA5Q9GZZ9 404 aa9.36□□□□□ -0.91
TARDBP-219ENST00000617757 RIOX1Q9H6W3 641 aa9.36□□□□□ -0.91
TARDBP-219ENST00000617757 SMCHD1A6NHR9 2005 aa9.36□□□□□ -0.91
TARDBP-219ENST00000617757 TCHHQ07283 1943 aa9.35□□□□□ -0.91
TARDBP-219ENST00000617757 A0A0G2JMZ2 1700 aa9.35□□□□□ -0.91
TARDBP-219ENST00000617757 TMEM232C9JQI7 657 aa9.35□□□□□ -0.91
TARDBP-219ENST00000617757 WDR46O15213 610 aaKnown RBP9.35□□□□□ -0.91
TARDBP-219ENST00000617757 TOMM70O94826 608 aa9.35□□□□□ -0.91
TARDBP-219ENST00000617757 DEXIO95424 95 aa9.35□□□□□ -0.91
TARDBP-219ENST00000617757 SYT1P21579 422 aa9.35□□□□□ -0.91
TARDBP-219ENST00000617757 HMGCS2P54868 508 aa9.35□□□□□ -0.91
TARDBP-219ENST00000617757 AKAP17AQ02040 695 aaKnown RBP9.35□□□□□ -0.91
TARDBP-219ENST00000617757 PPIL2Q13356 520 aa9.35□□□□□ -0.91
TARDBP-219ENST00000617757 PKN1Q16512 942 aa9.35□□□□□ -0.91
TARDBP-219ENST00000617757 FAM83BQ5T0W9 1011 aa9.35□□□□□ -0.91
TARDBP-219ENST00000617757 LARP1BQ659C4 914 aaKnown RBP9.35□□□□□ -0.91
TARDBP-219ENST00000617757 BTNL9Q6UXG8 535 aa9.35□□□□□ -0.91
TARDBP-219ENST00000617757 ZNF784Q8NCA9 323 aaPredicted RBP9.35□□□□□ -0.91
TARDBP-219ENST00000617757 RBM46Q8TBY0 533 aaKnown RBP9.35□□□□□ -0.91
TARDBP-219ENST00000617757 LPAR1Q92633 364 aa9.35□□□□□ -0.91
TARDBP-219ENST00000617757 OPTNQ96CV9 577 aa9.35□□□□□ -0.91
TARDBP-219ENST00000617757 SLC10A4Q96EP9 437 aa9.35□□□□□ -0.91
TARDBP-219ENST00000617757 OTUD5Q96G74 571 aa9.35□□□□□ -0.91
TARDBP-219ENST00000617757 C12orf42Q96LP6 360 aa9.35□□□□□ -0.91
TARDBP-219ENST00000617757 AIFM3Q96NN9 605 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms