RNA–Protein interactions for RNA: ENST00000617647.4

PDE6A-205, Transcript of phosphodiesterase 6A, humanhuman

TSL 1 (best) BASIC

Gene PDE6A, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-205ENST00000617647 ZRANB1Q9UGI0 708 aa8.18□□□□□ -1.1
PDE6A-205ENST00000617647 NFU1Q9UMS0 254 aa8.18□□□□□ -1.1
PDE6A-205ENST00000617647 TRAPPC8Q9Y2L5 1435 aa8.18□□□□□ -1.1
PDE6A-205ENST00000617647 PHF20L1A8MW92 1017 aa8.18□□□□□ -1.1
PDE6A-205ENST00000617647 M0R2C6 588 aa8.18□□□□□ -1.1
PDE6A-205ENST00000617647 AKR1B10O60218 316 aa8.18□□□□□ -1.1
PDE6A-205ENST00000617647 OPHN1O60890 802 aa8.18□□□□□ -1.1
PDE6A-205ENST00000617647 TRIM37O94972 964 aa8.18□□□□□ -1.1
PDE6A-205ENST00000617647 ATP8B2P98198 1209 aa8.18□□□□□ -1.1
PDE6A-205ENST00000617647 NEXNQ0ZGT2 675 aa8.18□□□□□ -1.1
PDE6A-205ENST00000617647 CFAP157Q5JU67 520 aa8.18□□□□□ -1.1
PDE6A-205ENST00000617647 NAA16Q6N069 864 aaPredicted RBP8.18□□□□□ -1.1
PDE6A-205ENST00000617647 LCA5Q86VQ0 697 aa8.18□□□□□ -1.1
PDE6A-205ENST00000617647 MAP7D3Q8IWC1 876 aa8.18□□□□□ -1.1
PDE6A-205ENST00000617647 STMN2Q93045 179 aa8.18□□□□□ -1.1
PDE6A-205ENST00000617647 ATP6V1G3Q96LB4 118 aa8.18□□□□□ -1.1
PDE6A-205ENST00000617647 NUP58Q9BVL2 599 aa8.18□□□□□ -1.1
PDE6A-205ENST00000617647 EPB41L5Q9HCM4 733 aa8.18□□□□□ -1.1
PDE6A-205ENST00000617647 GGT7Q9UJ14 662 aa8.18□□□□□ -1.1
PDE6A-205ENST00000617647 BLOC1S6Q9UL45 172 aa8.18□□□□□ -1.1
PDE6A-205ENST00000617647 TRPM2O94759 1503 aa8.18□□□□□ -1.1
PDE6A-205ENST00000617647 CFAP65Q6ZU64 1925 aaKnown RBP8.17□□□□□ -1.1
PDE6A-205ENST00000617647 TARSL2A2RTX5 802 aaKnown RBP8.17□□□□□ -1.1
PDE6A-205ENST00000617647 ANKRD33BA6NCL7 494 aa8.17□□□□□ -1.1
PDE6A-205ENST00000617647 SPDYE3A6NKU9 549 aa8.17□□□□□ -1.1
PDE6A-205ENST00000617647 SHOX2O60902 331 aaPredicted RBP8.17□□□□□ -1.1
PDE6A-205ENST00000617647 A1BGP04217 495 aa8.17□□□□□ -1.1
PDE6A-205ENST00000617647 MPP3Q13368 585 aa8.17□□□□□ -1.1
PDE6A-205ENST00000617647 POLA2Q14181 598 aa8.17□□□□□ -1.1
PDE6A-205ENST00000617647 SETDB1Q15047 1291 aa8.17□□□□□ -1.1
PDE6A-205ENST00000617647 PPP1R42Q7Z4L9 355 aa8.17□□□□□ -1.1
PDE6A-205ENST00000617647 NCAPG2Q86XI2 1143 aa8.17□□□□□ -1.1
PDE6A-205ENST00000617647 KLHL7Q8IXQ5 586 aa8.17□□□□□ -1.1
PDE6A-205ENST00000617647 CCDC65Q8IXS2 484 aa8.17□□□□□ -1.1
PDE6A-205ENST00000617647 ARHGEF2Q92974 986 aaKnown RBP8.17□□□□□ -1.1
PDE6A-205ENST00000617647 LRRC45Q96CN5 670 aa8.17□□□□□ -1.1
PDE6A-205ENST00000617647 ZIM3Q96PE6 472 aa8.17□□□□□ -1.1
PDE6A-205ENST00000617647 PANX2Q96RD6 677 aa8.17□□□□□ -1.1
PDE6A-205ENST00000617647 DDX23Q9BUQ8 820 aaKnown RBP8.17□□□□□ -1.1
PDE6A-205ENST00000617647 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.17□□□□□ -1.1
PDE6A-205ENST00000617647 HMG20BQ9P0W2 317 aa8.17□□□□□ -1.1
PDE6A-205ENST00000617647 NOVA2Q9UNW9 492 aaKnown RBP8.17□□□□□ -1.1
PDE6A-205ENST00000617647 EPN1Q9Y6I3 576 aaPredicted RBP8.17□□□□□ -1.1
PDE6A-205ENST00000617647 NEURL4Q96JN8 1562 aa8.17□□□□□ -1.1
PDE6A-205ENST00000617647 NOS1P29475 1434 aa8.17□□□□□ -1.1
PDE6A-205ENST00000617647 PNMA6EA0A0J9YXQ4 647 aa8.17□□□□□ -1.1
PDE6A-205ENST00000617647 SKIP12755 728 aa8.17□□□□□ -1.1
PDE6A-205ENST00000617647 MYL6BP14649 208 aa8.17□□□□□ -1.1
PDE6A-205ENST00000617647 MAP3K12Q12852 859 aa8.17□□□□□ -1.1
PDE6A-205ENST00000617647 BICDL1Q6ZP65 573 aa8.17□□□□□ -1.1
PDE6A-205ENST00000617647 RBM12BQ8IXT5 1001 aaKnown RBP8.17□□□□□ -1.1
PDE6A-205ENST00000617647 TC2NQ8N9U0 490 aa8.17□□□□□ -1.1
PDE6A-205ENST00000617647 RMDN2Q96LZ7 410 aa8.17□□□□□ -1.1
PDE6A-205ENST00000617647 MAF1Q9H063 256 aa8.17□□□□□ -1.1
PDE6A-205ENST00000617647 GIGYF1O75420 1035 aaPredicted RBP8.17□□□□□ -1.1
PDE6A-205ENST00000617647 RNF8O76064 485 aa8.17□□□□□ -1.1
PDE6A-205ENST00000617647 TMCC1O94876 653 aa8.17□□□□□ -1.1
PDE6A-205ENST00000617647 RAD9BQ6WBX8 426 aa8.17□□□□□ -1.1
PDE6A-205ENST00000617647 TMEM110Q86TL2 294 aa8.17□□□□□ -1.1
PDE6A-205ENST00000617647 ARHGAP18Q8N392 663 aa8.17□□□□□ -1.1
PDE6A-205ENST00000617647 CCDC51Q96ER9 411 aa8.17□□□□□ -1.1
PDE6A-205ENST00000617647 HIC2Q96JB3 615 aa8.17□□□□□ -1.1
PDE6A-205ENST00000617647 CCDC42Q96M95 316 aa8.17□□□□□ -1.1
PDE6A-205ENST00000617647 C19orf44Q9H6X5 657 aa8.17□□□□□ -1.1
PDE6A-205ENST00000617647 LARSQ9P2J5 1176 aaKnown RBP8.17□□□□□ -1.1
PDE6A-205ENST00000617647 PLAAQ9Y263 795 aa8.17□□□□□ -1.1
PDE6A-205ENST00000617647 PCDHGC5Q9Y5F6 944 aa8.17□□□□□ -1.1
PDE6A-205ENST00000617647 CLIC4Q9Y696 253 aa8.17□□□□□ -1.1
PDE6A-205ENST00000617647 SYNMO15061 1565 aa8.16□□□□□ -1.1
PDE6A-205ENST00000617647 KIAA1210Q9ULL0 1709 aa8.16□□□□□ -1.1
PDE6A-205ENST00000617647 ZPR1O75312 459 aa8.16□□□□□ -1.1
PDE6A-205ENST00000617647 SMNDC1O75940 238 aaKnown RBP eCLIP8.16□□□□□ -1.1
PDE6A-205ENST00000617647 ATP1A1P05023 1023 aaKnown RBP8.16□□□□□ -1.1
PDE6A-205ENST00000617647 TMOD1P28289 359 aa8.16□□□□□ -1.1
PDE6A-205ENST00000617647 CXCR5P32302 372 aa8.16□□□□□ -1.1
PDE6A-205ENST00000617647 PPP1R15BQ5SWA1 713 aa8.16□□□□□ -1.1
PDE6A-205ENST00000617647 ANO1Q5XXA6 986 aa8.16□□□□□ -1.1
PDE6A-205ENST00000617647 FMR1NBQ8N0W7 255 aaPredicted RBP8.16□□□□□ -1.1
PDE6A-205ENST00000617647 KIF2BQ8N4N8 673 aa8.16□□□□□ -1.1
PDE6A-205ENST00000617647 MLKLQ8NB16 471 aa8.16□□□□□ -1.1
PDE6A-205ENST00000617647 MGARPQ8TDB4 240 aa8.16□□□□□ -1.1
PDE6A-205ENST00000617647 AGAP11Q8TF27 550 aa8.16□□□□□ -1.1
PDE6A-205ENST00000617647 BORCS6Q96GS4 357 aa8.16□□□□□ -1.1
PDE6A-205ENST00000617647 LUC7LQ9NQ29 371 aaKnown RBP8.16□□□□□ -1.1
PDE6A-205ENST00000617647 SAMSN1Q9NSI8 373 aaKnown RBP8.16□□□□□ -1.1
PDE6A-205ENST00000617647 FAF1Q9UNN5 650 aaPredicted RBP8.16□□□□□ -1.1
PDE6A-205ENST00000617647 HEXIM1O94992 359 aaKnown RBP8.16□□□□□ -1.1
PDE6A-205ENST00000617647 C1QTNF12Q5T7M4 302 aa8.16□□□□□ -1.1
PDE6A-205ENST00000617647 TRIML1Q8N9V2 468 aa8.16□□□□□ -1.1
PDE6A-205ENST00000617647 CEP70Q8NHQ1 597 aa8.16□□□□□ -1.1
PDE6A-205ENST00000617647 MAGEC3Q8TD91 643 aa8.16□□□□□ -1.1
PDE6A-205ENST00000617647 DYDC2Q96IM9 177 aa8.16□□□□□ -1.1
PDE6A-205ENST00000617647 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.16□□□□□ -1.1
PDE6A-205ENST00000617647 CCDC8Q9H0W5 538 aaPredicted RBP8.16□□□□□ -1.1
PDE6A-205ENST00000617647 ECT2Q9H8V3 914 aa8.16□□□□□ -1.1
PDE6A-205ENST00000617647 PCDHA5Q9Y5H7 936 aa8.16□□□□□ -1.1
PDE6A-205ENST00000617647 KDRP35968 1356 aa8.16□□□□□ -1.1
PDE6A-205ENST00000617647 TCHHQ07283 1943 aa8.16□□□□□ -1.1
PDE6A-205ENST00000617647 ZC3H13Q5T200 1668 aaKnown RBP8.16□□□□□ -1.1
PDE6A-205ENST00000617647 E2F6O75461 281 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms