RNA–Protein interactions for RNA: ENST00000617103.4

CLTCL1-209, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,859 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-209ENST00000617103 ENC1O14682 589 aa11.74□□□□□ -0.53
CLTCL1-209ENST00000617103 H2AFZP0C0S5 128 aa11.74□□□□□ -0.53
CLTCL1-209ENST00000617103 PDIA3P30101 505 aaKnown RBP11.74□□□□□ -0.53
CLTCL1-209ENST00000617103 E2F5Q15329 346 aa11.74□□□□□ -0.53
CLTCL1-209ENST00000617103 E2F4Q16254 413 aa11.74□□□□□ -0.53
CLTCL1-209ENST00000617103 ADCK5Q3MIX3 580 aa11.74□□□□□ -0.53
CLTCL1-209ENST00000617103 PAXIP1Q6ZW49 1069 aaPredicted RBP11.74□□□□□ -0.53
CLTCL1-209ENST00000617103 H2AFVQ71UI9 128 aa11.74□□□□□ -0.53
CLTCL1-209ENST00000617103 CERS3Q8IU89 383 aa11.74□□□□□ -0.53
CLTCL1-209ENST00000617103 NT5C3AQ9H0P0 336 aa11.74□□□□□ -0.53
CLTCL1-209ENST00000617103 ZMYM6O95789 1325 aa11.74□□□□□ -0.53
CLTCL1-209ENST00000617103 hCG_1642624A0A1W2PR95 340 aa11.74□□□□□ -0.53
CLTCL1-209ENST00000617103 ARHGEF35A5YM69 484 aa11.74□□□□□ -0.53
CLTCL1-209ENST00000617103 BTBD18B2RXH4 712 aa11.74□□□□□ -0.53
CLTCL1-209ENST00000617103 MAGEA9P43362 315 aa11.74□□□□□ -0.53
CLTCL1-209ENST00000617103 ADCY7P51828 1080 aa11.74□□□□□ -0.53
CLTCL1-209ENST00000617103 SCRN1Q12765 414 aa11.74□□□□□ -0.53
CLTCL1-209ENST00000617103 CCDC13Q8IYE1 715 aa11.74□□□□□ -0.53
CLTCL1-209ENST00000617103 MYOCDQ8IZQ8 938 aa11.74□□□□□ -0.53
CLTCL1-209ENST00000617103 AFAP1L2Q8N4X5 818 aa11.74□□□□□ -0.53
CLTCL1-209ENST00000617103 NYXQ9GZU5 481 aa11.74□□□□□ -0.53
CLTCL1-209ENST00000617103 POLR3EQ9NVU0 708 aa11.74□□□□□ -0.53
CLTCL1-209ENST00000617103 OPHN1O60890 802 aa11.74□□□□□ -0.53
CLTCL1-209ENST00000617103 XRCC5P13010 732 aaKnown RBP11.74□□□□□ -0.53
CLTCL1-209ENST00000617103 CEBPAP49715 358 aaPredicted RBP11.74□□□□□ -0.53
CLTCL1-209ENST00000617103 CASP8Q14790 479 aa11.74□□□□□ -0.53
CLTCL1-209ENST00000617103 GEN1Q17RS7 908 aa11.74□□□□□ -0.53
CLTCL1-209ENST00000617103 DCUN1D2Q6PH85 259 aa11.74□□□□□ -0.53
CLTCL1-209ENST00000617103 SPATA31E1Q6ZUB1 1445 aa11.74□□□□□ -0.53
CLTCL1-209ENST00000617103 HINFPQ9BQA5 517 aa11.74□□□□□ -0.53
CLTCL1-209ENST00000617103 TRIM4Q9C037 500 aa11.74□□□□□ -0.53
CLTCL1-209ENST00000617103 RABGAP1Q9Y3P9 1069 aa11.74□□□□□ -0.53
CLTCL1-209ENST00000617103 TACC3Q9Y6A5 838 aa11.74□□□□□ -0.53
CLTCL1-209ENST00000617103 SYCP2Q9BX26 1530 aa11.74□□□□□ -0.53
CLTCL1-209ENST00000617103 EDC4Q6P2E9 1401 aaKnown RBP11.74□□□□□ -0.53
CLTCL1-209ENST00000617103 FRMD3A2A2Y4 597 aa11.74□□□□□ -0.53
CLTCL1-209ENST00000617103 HSPD1P10809 573 aaKnown RBP11.74□□□□□ -0.53
CLTCL1-209ENST00000617103 SLFNL1Q499Z3 407 aa11.74□□□□□ -0.53
CLTCL1-209ENST00000617103 TCP11Q8WWU5 503 aa11.74□□□□□ -0.53
CLTCL1-209ENST00000617103 LPIN2Q92539 896 aa11.74□□□□□ -0.53
CLTCL1-209ENST00000617103 JPH2Q9BR39 696 aaPredicted RBP11.74□□□□□ -0.53
CLTCL1-209ENST00000617103 USTQ9Y2C2 406 aa11.74□□□□□ -0.53
CLTCL1-209ENST00000617103 NUP153P49790 1475 aaKnown RBP11.73□□□□□ -0.53
CLTCL1-209ENST00000617103 PPP6R2O75170 966 aa11.73□□□□□ -0.53
CLTCL1-209ENST00000617103 SMIM24O75264 130 aa11.73□□□□□ -0.53
CLTCL1-209ENST00000617103 ZWINTO95229 277 aa11.73□□□□□ -0.53
CLTCL1-209ENST00000617103 ICE2Q659A1 982 aa11.73□□□□□ -0.53
CLTCL1-209ENST00000617103 MCTP2Q6DN12 878 aa11.73□□□□□ -0.53
CLTCL1-209ENST00000617103 TEX11Q8IYF3 940 aa11.73□□□□□ -0.53
CLTCL1-209ENST00000617103 ANKRD13CQ8N6S4 541 aa11.73□□□□□ -0.53
CLTCL1-209ENST00000617103 EPSTI1Q96J88 318 aa11.73□□□□□ -0.53
CLTCL1-209ENST00000617103 ACTR5Q9H9F9 607 aaPredicted RBP11.73□□□□□ -0.53
CLTCL1-209ENST00000617103 RAPGEF6Q8TEU7 1601 aa11.73□□□□□ -0.53
CLTCL1-209ENST00000617103 ATP10BO94823 1461 aa11.73□□□□□ -0.53
CLTCL1-209ENST00000617103 SHANK2Q9UPX8 1470 aa11.73□□□□□ -0.53
CLTCL1-209ENST00000617103 PTPRTO14522 1441 aa11.73□□□□□ -0.53
CLTCL1-209ENST00000617103 ARHGAP42A6NI28 874 aa11.73□□□□□ -0.53
CLTCL1-209ENST00000617103 EVI5O60447 810 aa11.73□□□□□ -0.53
CLTCL1-209ENST00000617103 ABCB4P21439 1286 aa11.73□□□□□ -0.53
CLTCL1-209ENST00000617103 RASA3Q14644 834 aa11.73□□□□□ -0.53
CLTCL1-209ENST00000617103 NCAPH2Q6IBW4 605 aa11.73□□□□□ -0.53
CLTCL1-209ENST00000617103 TPTE2Q6XPS3 522 aa11.73□□□□□ -0.53
CLTCL1-209ENST00000617103 RUNDC3BQ96NL0 473 aa11.73□□□□□ -0.53
CLTCL1-209ENST00000617103 TPX2Q9ULW0 747 aaKnown RBP11.73□□□□□ -0.53
CLTCL1-209ENST00000617103 ZNF521Q96K83 1311 aa11.73□□□□□ -0.53
CLTCL1-209ENST00000617103 GCNT3O95395 438 aa11.73□□□□□ -0.53
CLTCL1-209ENST00000617103 RPN1P04843 607 aaKnown RBP11.73□□□□□ -0.53
CLTCL1-209ENST00000617103 EHHADHQ08426 723 aa11.73□□□□□ -0.53
CLTCL1-209ENST00000617103 ARHGAP44Q17R89 818 aa11.73□□□□□ -0.53
CLTCL1-209ENST00000617103 CADPS2Q86UW7 1296 aa11.73□□□□□ -0.53
CLTCL1-209ENST00000617103 REXO1Q8N1G1 1221 aaKnown RBP11.73□□□□□ -0.53
CLTCL1-209ENST00000617103 CFAP61Q8NHU2 1237 aa11.73□□□□□ -0.53
CLTCL1-209ENST00000617103 GRK7Q8WTQ7 553 aa11.73□□□□□ -0.53
CLTCL1-209ENST00000617103 ATP2A3Q93084 1043 aa11.73□□□□□ -0.53
CLTCL1-209ENST00000617103 KRT12Q99456 494 aa11.73□□□□□ -0.53
CLTCL1-209ENST00000617103 MRPL44Q9H9J2 332 aaKnown RBP11.73□□□□□ -0.53
CLTCL1-209ENST00000617103 TYW1Q9NV66 732 aaKnown RBP11.73□□□□□ -0.53
CLTCL1-209ENST00000617103 ADAM21Q9UKJ8 722 aa11.73□□□□□ -0.53
CLTCL1-209ENST00000617103 ADCY9O60503 1353 aa11.73□□□□□ -0.53
CLTCL1-209ENST00000617103 BACH1O14867 736 aa11.72□□□□□ -0.53
CLTCL1-209ENST00000617103 BAG2O95816 211 aa11.72□□□□□ -0.53
CLTCL1-209ENST00000617103 SESN3P58005 492 aa11.72□□□□□ -0.53
CLTCL1-209ENST00000617103 MMS22LQ6ZRQ5 1243 aa11.72□□□□□ -0.53
CLTCL1-209ENST00000617103 CCT6BQ92526 530 aa11.72□□□□□ -0.53
CLTCL1-209ENST00000617103 Q9H521 79 aa11.72□□□□□ -0.53
CLTCL1-209ENST00000617103 VCX3AQ9NNX9 186 aa11.72□□□□□ -0.53
CLTCL1-209ENST00000617103 RIC8AQ9NPQ8 531 aa11.72□□□□□ -0.53
CLTCL1-209ENST00000617103 NSFL1CQ9UNZ2 370 aaKnown RBP11.72□□□□□ -0.53
CLTCL1-209ENST00000617103 CHMP2AO43633 222 aa11.72□□□□□ -0.53
CLTCL1-209ENST00000617103 ZMYND10O75800 440 aa11.72□□□□□ -0.53
CLTCL1-209ENST00000617103 HEXIM1O94992 359 aaKnown RBP11.72□□□□□ -0.53
CLTCL1-209ENST00000617103 ADAMTS2O95450 1211 aa11.72□□□□□ -0.53
CLTCL1-209ENST00000617103 GCP02774 474 aa11.72□□□□□ -0.53
CLTCL1-209ENST00000617103 RAD51AP2Q09MP3 1159 aa11.72□□□□□ -0.53
CLTCL1-209ENST00000617103 MYCT1Q8N699 235 aa11.72□□□□□ -0.53
CLTCL1-209ENST00000617103 FANCBQ8NB91 859 aa11.72□□□□□ -0.53
CLTCL1-209ENST00000617103 RETREG2Q8NC44 543 aa11.72□□□□□ -0.53
CLTCL1-209ENST00000617103 PDLIM2Q96JY6 352 aa11.72□□□□□ -0.53
CLTCL1-209ENST00000617103 ARMCX3Q9UH62 379 aaPredicted RBP11.72□□□□□ -0.53
CLTCL1-209ENST00000617103 UHRF1BP1LA0JNW5 1464 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms