RNA–Protein interactions for RNA: ENST00000615230.4

TNFRSF9-204, Transcript of TNF receptor superfamily member 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFRSF9, Length 5,970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-204ENST00000615230 NEK8Q86SG6 692 aa10.86□□□□□ -0.67
TNFRSF9-204ENST00000615230 STMN4Q9H169 189 aaPredicted RBP10.86□□□□□ -0.67
TNFRSF9-204ENST00000615230 PNMA6EA0A0J9YXQ4 647 aa10.85□□□□□ -0.67
TNFRSF9-204ENST00000615230 UBASH3AP57075 661 aa10.85□□□□□ -0.67
TNFRSF9-204ENST00000615230 R3HDM1Q15032 1099 aaKnown RBP10.85□□□□□ -0.67
TNFRSF9-204ENST00000615230 LRRC24Q50LG9 513 aa10.85□□□□□ -0.67
TNFRSF9-204ENST00000615230 FAM47AQ5JRC9 791 aa10.85□□□□□ -0.67
TNFRSF9-204ENST00000615230 TBC1D9BQ66K14 1250 aa10.85□□□□□ -0.67
TNFRSF9-204ENST00000615230 FAM200AQ8TCP9 573 aa10.85□□□□□ -0.67
TNFRSF9-204ENST00000615230 ZNF830Q96NB3 372 aaPredicted RBP10.85□□□□□ -0.67
TNFRSF9-204ENST00000615230 PANK2Q9BZ23 570 aa10.85□□□□□ -0.67
TNFRSF9-204ENST00000615230 KAT6BQ8WYB5 2073 aa10.85□□□□□ -0.67
TNFRSF9-204ENST00000615230 KLRF2D3W0D1 207 aa10.85□□□□□ -0.67
TNFRSF9-204ENST00000615230 ZNF853P0CG23 659 aa10.85□□□□□ -0.67
TNFRSF9-204ENST00000615230 ADD2P35612 726 aa10.85□□□□□ -0.67
TNFRSF9-204ENST00000615230 SURF1Q15526 300 aa10.85□□□□□ -0.67
TNFRSF9-204ENST00000615230 PTPN14Q15678 1187 aa10.85□□□□□ -0.67
TNFRSF9-204ENST00000615230 TMC6Q7Z403 805 aa10.85□□□□□ -0.67
TNFRSF9-204ENST00000615230 METTL13Q8N6R0 699 aa10.85□□□□□ -0.67
TNFRSF9-204ENST00000615230 CUEDC2Q9H467 287 aa10.85□□□□□ -0.67
TNFRSF9-204ENST00000615230 CGNQ9P2M7 1197 aaKnown RBP10.85□□□□□ -0.67
TNFRSF9-204ENST00000615230 HERC5Q9UII4 1024 aaKnown RBP10.85□□□□□ -0.67
TNFRSF9-204ENST00000615230 ABCB11O95342 1321 aa10.85□□□□□ -0.67
TNFRSF9-204ENST00000615230 PNPLA6Q8IY17 1366 aa10.85□□□□□ -0.67
TNFRSF9-204ENST00000615230 DDX39AO00148 427 aaKnown RBP10.85□□□□□ -0.67
TNFRSF9-204ENST00000615230 PSAPP07602 524 aa10.85□□□□□ -0.67
TNFRSF9-204ENST00000615230 SCG2P13521 617 aa10.85□□□□□ -0.67
TNFRSF9-204ENST00000615230 LEKR1Q6ZMV7 388 aa10.85□□□□□ -0.67
TNFRSF9-204ENST00000615230 DIS3L2Q8IYB7 885 aaKnown RBP10.85□□□□□ -0.67
TNFRSF9-204ENST00000615230 TCP11Q8WWU5 503 aa10.85□□□□□ -0.67
TNFRSF9-204ENST00000615230 NAP1L3Q99457 506 aaPredicted RBP10.85□□□□□ -0.67
TNFRSF9-204ENST00000615230 PARK7Q99497 189 aaKnown RBP10.85□□□□□ -0.67
TNFRSF9-204ENST00000615230 SNX14Q9Y5W7 946 aa10.85□□□□□ -0.67
TNFRSF9-204ENST00000615230 KRT5P13647 590 aa10.85□□□□□ -0.67
TNFRSF9-204ENST00000615230 GAP43P17677 238 aa10.85□□□□□ -0.67
TNFRSF9-204ENST00000615230 POLGP54098 1239 aaPredicted RBP10.85□□□□□ -0.67
TNFRSF9-204ENST00000615230 ZMYM1Q5SVZ6 1142 aa10.85□□□□□ -0.67
TNFRSF9-204ENST00000615230 FAM182BQ5T319 152 aa10.85□□□□□ -0.67
TNFRSF9-204ENST00000615230 SND1Q7KZF4 910 aaKnown RBP eCLIP10.85□□□□□ -0.67
TNFRSF9-204ENST00000615230 RBM46Q8TBY0 533 aaKnown RBP10.85□□□□□ -0.67
TNFRSF9-204ENST00000615230 NACC1Q96RE7 527 aa10.85□□□□□ -0.67
TNFRSF9-204ENST00000615230 CCDC77Q9BR77 488 aa10.85□□□□□ -0.67
TNFRSF9-204ENST00000615230 RIOK1Q9BRS2 568 aaKnown RBP10.85□□□□□ -0.67
TNFRSF9-204ENST00000615230 DDX25Q9UHL0 483 aaKnown RBP10.85□□□□□ -0.67
TNFRSF9-204ENST00000615230 PRDM1O75626 825 aa10.84□□□□□ -0.67
TNFRSF9-204ENST00000615230 ECM2O94769 699 aaPredicted RBP10.84□□□□□ -0.67
TNFRSF9-204ENST00000615230 IFFO1Q0D2I5 559 aa10.84□□□□□ -0.67
TNFRSF9-204ENST00000615230 ALCAMQ13740 583 aa10.84□□□□□ -0.67
TNFRSF9-204ENST00000615230 SLF1Q9BQI6 1058 aa10.84□□□□□ -0.67
TNFRSF9-204ENST00000615230 PLA2G12BQ9BX93 195 aa10.84□□□□□ -0.67
TNFRSF9-204ENST00000615230 MROH2AA6NES4 1674 aa10.84□□□□□ -0.67
TNFRSF9-204ENST00000615230 GOLGA6CA6NDK9 693 aa10.84□□□□□ -0.67
TNFRSF9-204ENST00000615230 GOLGA6BA6NDN3 693 aa10.84□□□□□ -0.67
TNFRSF9-204ENST00000615230 GOLGA6DP0CG33 693 aa10.84□□□□□ -0.67
TNFRSF9-204ENST00000615230 ZNF165P49910 485 aa10.84□□□□□ -0.67
TNFRSF9-204ENST00000615230 LIG4P49917 911 aa10.84□□□□□ -0.67
TNFRSF9-204ENST00000615230 KIF18AQ8NI77 898 aa10.84□□□□□ -0.67
TNFRSF9-204ENST00000615230 INO80BQ9C086 356 aaPredicted RBP10.84□□□□□ -0.67
TNFRSF9-204ENST00000615230 GOLGA6AQ9NYA3 693 aa10.84□□□□□ -0.67
TNFRSF9-204ENST00000615230 PHKA1P46020 1223 aa10.84□□□□□ -0.67
TNFRSF9-204ENST00000615230 CHST3Q7LGC8 479 aa10.84□□□□□ -0.67
TNFRSF9-204ENST00000615230 IPO4Q8TEX9 1081 aaKnown RBP10.84□□□□□ -0.67
TNFRSF9-204ENST00000615230 KDM6AO15550 1401 aaPredicted RBP10.84□□□□□ -0.67
TNFRSF9-204ENST00000615230 EEF2P13639 858 aaKnown RBP10.84□□□□□ -0.67
TNFRSF9-204ENST00000615230 RGS22Q8NE09 1264 aa10.84□□□□□ -0.67
TNFRSF9-204ENST00000615230 TNKSO95271 1327 aa10.84□□□□□ -0.67
TNFRSF9-204ENST00000615230 ASB14A6NK59 587 aa10.84□□□□□ -0.67
TNFRSF9-204ENST00000615230 TRAF5O00463 557 aa10.84□□□□□ -0.67
TNFRSF9-204ENST00000615230 FAM102BQ5T8I3 360 aa10.84□□□□□ -0.67
TNFRSF9-204ENST00000615230 GCNAQ96QF7 691 aa10.84□□□□□ -0.67
TNFRSF9-204ENST00000615230 CRACR2AQ9BSW2 395 aa10.84□□□□□ -0.67
TNFRSF9-204ENST00000615230 SH3GLB2Q9NR46 395 aa10.84□□□□□ -0.67
TNFRSF9-204ENST00000615230 MTUS1Q9ULD2 1270 aa10.84□□□□□ -0.67
TNFRSF9-204ENST00000615230 PTPREP23469 700 aa10.83□□□□□ -0.68
TNFRSF9-204ENST00000615230 XKR9Q5GH70 373 aa10.83□□□□□ -0.68
TNFRSF9-204ENST00000615230 DPH6Q7L8W6 267 aa10.83□□□□□ -0.68
TNFRSF9-204ENST00000615230 PLCD3Q8N3E9 789 aa10.83□□□□□ -0.68
TNFRSF9-204ENST00000615230 TTLL11Q8NHH1 800 aa10.83□□□□□ -0.68
TNFRSF9-204ENST00000615230 CACTINQ8WUQ7 758 aaKnown RBP10.83□□□□□ -0.68
TNFRSF9-204ENST00000615230 MRPL44Q9H9J2 332 aaKnown RBP10.83□□□□□ -0.68
TNFRSF9-204ENST00000615230 AP3B2Q13367 1082 aa10.83□□□□□ -0.68
TNFRSF9-204ENST00000615230 FANCBQ8NB91 859 aa10.83□□□□□ -0.68
TNFRSF9-204ENST00000615230 PCDHA1Q9Y5I3 950 aa10.83□□□□□ -0.68
TNFRSF9-204ENST00000615230 PPP2R3BQ9Y5P8 575 aa10.83□□□□□ -0.68
TNFRSF9-204ENST00000615230 RLBP1P12271 317 aa10.83□□□□□ -0.68
TNFRSF9-204ENST00000615230 JAK3P52333 1124 aa10.83□□□□□ -0.68
TNFRSF9-204ENST00000615230 AOC3Q16853 763 aa10.83□□□□□ -0.68
TNFRSF9-204ENST00000615230 UTP14CQ5TAP6 766 aaKnown RBP10.83□□□□□ -0.68
TNFRSF9-204ENST00000615230 STRIP1Q5VSL9 837 aa10.83□□□□□ -0.68
TNFRSF9-204ENST00000615230 TAX1BP1Q86VP1 789 aa10.83□□□□□ -0.68
TNFRSF9-204ENST00000615230 LRRC47Q8N1G4 583 aaKnown RBP10.83□□□□□ -0.68
TNFRSF9-204ENST00000615230 PDCL2Q8N4E4 241 aa10.83□□□□□ -0.68
TNFRSF9-204ENST00000615230 STAP2Q9UGK3 403 aa10.83□□□□□ -0.68
TNFRSF9-204ENST00000615230 FRMPD2Q68DX3 1309 aaPredicted RBP10.83□□□□□ -0.68
TNFRSF9-204ENST00000615230 C19orf81C9J6K1 198 aa10.83□□□□□ -0.68
TNFRSF9-204ENST00000615230 BIN1O00499 593 aa10.83□□□□□ -0.68
TNFRSF9-204ENST00000615230 HARSP12081 509 aaKnown RBP10.83□□□□□ -0.68
TNFRSF9-204ENST00000615230 FAM160A1Q05DH4 1040 aa10.83□□□□□ -0.68
TNFRSF9-204ENST00000615230 KLHL40Q2TBA0 621 aa10.83□□□□□ -0.68
TNFRSF9-204ENST00000615230 SEL1L2Q5TEA6 688 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms