RNA–Protein interactions for RNA: ENST00000613211.1

CCDC144B-207, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

TSL 3

Gene CCDC144B, Length 577 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-207ENST00000613211 GOLGA8BA8MQT2 603 aa13.77□□□□□ -0.21
CCDC144B-207ENST00000613211 DHX16O60231 1041 aaKnown RBP13.77□□□□□ -0.21
CCDC144B-207ENST00000613211 PLA2G6O60733 806 aa13.77□□□□□ -0.21
CCDC144B-207ENST00000613211 CD2BP2O95400 341 aaKnown RBP13.77□□□□□ -0.21
CCDC144B-207ENST00000613211 PDHBP11177 359 aa13.77□□□□□ -0.21
CCDC144B-207ENST00000613211 SMARCA1P28370 1054 aa13.77□□□□□ -0.21
CCDC144B-207ENST00000613211 GNAQP50148 359 aa13.77□□□□□ -0.21
CCDC144B-207ENST00000613211 GTF2A2P52657 109 aa13.77□□□□□ -0.21
CCDC144B-207ENST00000613211 SNAPC2Q13487 334 aa13.77□□□□□ -0.21
CCDC144B-207ENST00000613211 MTMR2Q13614 643 aa13.77□□□□□ -0.21
CCDC144B-207ENST00000613211 GRM4Q14833 912 aa13.77□□□□□ -0.21
CCDC144B-207ENST00000613211 ASPRV1Q53RT3 343 aa13.77□□□□□ -0.21
CCDC144B-207ENST00000613211 SLFN13Q68D06 897 aa13.77□□□□□ -0.21
CCDC144B-207ENST00000613211 PRRT2Q7Z6L0 340 aaPredicted RBP13.77□□□□□ -0.21
CCDC144B-207ENST00000613211 LRRC47Q8N1G4 583 aaKnown RBP13.77□□□□□ -0.21
CCDC144B-207ENST00000613211 PROCA1Q8NCQ7 364 aaPredicted RBP13.77□□□□□ -0.21
CCDC144B-207ENST00000613211 CTCFLQ8NI51 663 aaPredicted RBP13.77□□□□□ -0.21
CCDC144B-207ENST00000613211 WNK4Q96J92 1243 aa13.77□□□□□ -0.21
CCDC144B-207ENST00000613211 LZTS2Q9BRK4 669 aa13.77□□□□□ -0.21
CCDC144B-207ENST00000613211 OTOFQ9HC10 1997 aa13.77□□□□□ -0.21
CCDC144B-207ENST00000613211 RBM28Q9NW13 759 aaKnown RBP13.77□□□□□ -0.21
CCDC144B-207ENST00000613211 PALM3A6NDB9 673 aaPredicted RBP13.76□□□□□ -0.21
CCDC144B-207ENST00000613211 K7ELQ4 463 aaPredicted RBP13.76□□□□□ -0.21
CCDC144B-207ENST00000613211 WDR46O15213 610 aaKnown RBP13.76□□□□□ -0.21
CCDC144B-207ENST00000613211 NDUFB10O96000 172 aa13.76□□□□□ -0.21
CCDC144B-207ENST00000613211 GJA5P36382 358 aa13.76□□□□□ -0.21
CCDC144B-207ENST00000613211 SLC1A4P43007 532 aa13.76□□□□□ -0.21
CCDC144B-207ENST00000613211 METAP2P50579 478 aaKnown RBP eCLIP13.76□□□□□ -0.21
CCDC144B-207ENST00000613211 ZNF157P51786 506 aaPredicted RBP13.76□□□□□ -0.21
CCDC144B-207ENST00000613211 ZNF543Q08ER8 600 aa13.76□□□□□ -0.21
CCDC144B-207ENST00000613211 ME3Q16798 604 aa13.76□□□□□ -0.21
CCDC144B-207ENST00000613211 FASTKD5Q7L8L6 764 aaKnown RBP13.76□□□□□ -0.21
CCDC144B-207ENST00000613211 HSCBQ8IWL3 235 aa13.76□□□□□ -0.21
CCDC144B-207ENST00000613211 CNKSR2Q8WXI2 1034 aa13.76□□□□□ -0.21
CCDC144B-207ENST00000613211 TMX3Q96JJ7 454 aa13.76□□□□□ -0.21
CCDC144B-207ENST00000613211 SLKQ9H2G2 1235 aaPredicted RBP13.76□□□□□ -0.21
CCDC144B-207ENST00000613211 EMILIN3Q9NT22 766 aa13.76□□□□□ -0.21
CCDC144B-207ENST00000613211 SAGE1Q9NXZ1 904 aa13.76□□□□□ -0.21
CCDC144B-207ENST00000613211 TMOD4Q9NZQ9 345 aa13.76□□□□□ -0.21
CCDC144B-207ENST00000613211 RBM19Q9Y4C8 960 aaKnown RBP13.76□□□□□ -0.21
CCDC144B-207ENST00000613211 ATAD5Q96QE3 1844 aa13.76□□□□□ -0.21
CCDC144B-207ENST00000613211 GOLGA8AA7E2F4 631 aa13.75□□□□□ -0.21
CCDC144B-207ENST00000613211 SLC10A3P09131 477 aa13.75□□□□□ -0.21
CCDC144B-207ENST00000613211 PARP1P09874 1014 aaKnown RBP13.75□□□□□ -0.21
CCDC144B-207ENST00000613211 CETPP11597 493 aa13.75□□□□□ -0.21
CCDC144B-207ENST00000613211 BMP3P12645 472 aa13.75□□□□□ -0.21
CCDC144B-207ENST00000613211 ANP32AP39687 249 aaKnown RBP13.75□□□□□ -0.21
CCDC144B-207ENST00000613211 HMGCS2P54868 508 aa13.75□□□□□ -0.21
CCDC144B-207ENST00000613211 BECN1Q14457 450 aa13.75□□□□□ -0.21
CCDC144B-207ENST00000613211 RTN1Q16799 776 aa13.75□□□□□ -0.21
CCDC144B-207ENST00000613211 MICU3Q86XE3 530 aa13.75□□□□□ -0.21
CCDC144B-207ENST00000613211 RASAL3Q86YV0 1011 aa13.75□□□□□ -0.21
CCDC144B-207ENST00000613211 GTF3C6Q969F1 213 aa13.75□□□□□ -0.21
CCDC144B-207ENST00000613211 MS4A4AQ96JQ5 239 aa13.75□□□□□ -0.21
CCDC144B-207ENST00000613211 MAD2L2Q9UI95 211 aa13.75□□□□□ -0.21
CCDC144B-207ENST00000613211 VCAM1P19320 739 aa13.74□□□□□ -0.21
CCDC144B-207ENST00000613211 HOXA7P31268 230 aaPredicted RBP13.74□□□□□ -0.21
CCDC144B-207ENST00000613211 INHBEP58166 350 aa13.74□□□□□ -0.21
CCDC144B-207ENST00000613211 CUL4AQ13619 759 aa13.74□□□□□ -0.21
CCDC144B-207ENST00000613211 KIAA1755Q5JYT7 1200 aa13.74□□□□□ -0.21
CCDC144B-207ENST00000613211 CPLX2Q6PUV4 134 aaKnown RBP13.74□□□□□ -0.21
CCDC144B-207ENST00000613211 BTNL9Q6UXG8 535 aa13.74□□□□□ -0.21
CCDC144B-207ENST00000613211 CTU1Q7Z7A3 348 aaKnown RBP13.74□□□□□ -0.21
CCDC144B-207ENST00000613211 NUP133Q8WUM0 1156 aa13.74□□□□□ -0.21
CCDC144B-207ENST00000613211 LARP6Q9BRS8 491 aaKnown RBP13.74□□□□□ -0.21
CCDC144B-207ENST00000613211 LLPHQ9BRT6 129 aaKnown RBP13.74□□□□□ -0.21
CCDC144B-207ENST00000613211 MYL10Q9BUA6 226 aa13.74□□□□□ -0.21
CCDC144B-207ENST00000613211 FAM217BQ9NTX9 383 aaPredicted RBP13.74□□□□□ -0.21
CCDC144B-207ENST00000613211 NAP1L2Q9ULW6 460 aaPredicted RBP13.74□□□□□ -0.21
CCDC144B-207ENST00000613211 SLC45A1Q9Y2W3 748 aa13.74□□□□□ -0.21
CCDC144B-207ENST00000613211 TESPA1A2RU30 521 aaPredicted RBP13.73□□□□□ -0.21
CCDC144B-207ENST00000613211 MANSC4A6NHS7 340 aaPredicted RBP13.73□□□□□ -0.21
CCDC144B-207ENST00000613211 KLRF2D3W0D1 207 aa13.73□□□□□ -0.21
CCDC144B-207ENST00000613211 CDKL5O76039 1030 aa13.73□□□□□ -0.21
CCDC144B-207ENST00000613211 IFNAR1P17181 557 aa13.73□□□□□ -0.21
CCDC144B-207ENST00000613211 SCRN1Q12765 414 aa13.73□□□□□ -0.21
CCDC144B-207ENST00000613211 PABPC4Q13310 644 aaKnown RBP eCLIP13.73□□□□□ -0.21
CCDC144B-207ENST00000613211 MOGSQ13724 837 aa13.73□□□□□ -0.21
CCDC144B-207ENST00000613211 ZYXQ15942 572 aaKnown RBP13.73□□□□□ -0.21
CCDC144B-207ENST00000613211 TMTC3Q6ZXV5 915 aa13.73□□□□□ -0.21
CCDC144B-207ENST00000613211 NOL8Q76FK4 1167 aaKnown RBP13.73□□□□□ -0.21
CCDC144B-207ENST00000613211 FAM160B2Q86V87 743 aa13.73□□□□□ -0.21
CCDC144B-207ENST00000613211 REM2Q8IYK8 340 aaPredicted RBP13.73□□□□□ -0.21
CCDC144B-207ENST00000613211 SPICE1Q8N0Z3 855 aa13.73□□□□□ -0.21
CCDC144B-207ENST00000613211 CHURC1Q8WUH1 139 aa13.73□□□□□ -0.21
CCDC144B-207ENST00000613211 INTS4Q96HW7 963 aaKnown RBP13.73□□□□□ -0.21
CCDC144B-207ENST00000613211 SPZ1Q9BXG8 430 aa13.73□□□□□ -0.21
CCDC144B-207ENST00000613211 FEM1BQ9UK73 627 aa13.73□□□□□ -0.21
CCDC144B-207ENST00000613211 AGTPBP1Q9UPW5 1226 aa13.73□□□□□ -0.21
CCDC144B-207ENST00000613211 PHIPQ8WWQ0 1821 aa13.73□□□□□ -0.21
CCDC144B-207ENST00000613211 MYPNQ86TC9 1320 aa13.72□□□□□ -0.21
CCDC144B-207ENST00000613211 FAM155AB1AL88 458 aaPredicted RBP13.72□□□□□ -0.21
CCDC144B-207ENST00000613211 USP17L15C9J2P7 530 aa13.72□□□□□ -0.21
CCDC144B-207ENST00000613211 USP17L13C9JLJ4 530 aa13.72□□□□□ -0.21
CCDC144B-207ENST00000613211 USP17L11C9JVI0 530 aa13.72□□□□□ -0.21
CCDC144B-207ENST00000613211 USP17L18D6R9N7 530 aa13.72□□□□□ -0.21
CCDC144B-207ENST00000613211 USP17L22D6RA61 530 aa13.72□□□□□ -0.21
CCDC144B-207ENST00000613211 USP17L17D6RBQ6 530 aa13.72□□□□□ -0.21
CCDC144B-207ENST00000613211 USP17L19D6RCP7 530 aa13.72□□□□□ -0.21
CCDC144B-207ENST00000613211 USP17L20D6RJB6 530 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms