RNA–Protein interactions for RNA: ENST00000611855.4

CDH4-202, Transcript of cadherin 4, humanhuman

TSL 5 BASIC

Gene CDH4, Length 3,304 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4-202ENST00000611855 PPARAQ07869 468 aa12.39□□□□□ -0.43
CDH4-202ENST00000611855 PDCLQ13371 301 aa12.39□□□□□ -0.43
CDH4-202ENST00000611855 CCDC122Q5T0U0 273 aa12.39□□□□□ -0.43
CDH4-202ENST00000611855 KCTD16Q68DU8 428 aa12.39□□□□□ -0.43
CDH4-202ENST00000611855 CYP26C1Q6V0L0 522 aa12.39□□□□□ -0.43
CDH4-202ENST00000611855 SGMS1Q86VZ5 419 aa12.39□□□□□ -0.43
CDH4-202ENST00000611855 TMTC1Q8IUR5 882 aa12.39□□□□□ -0.43
CDH4-202ENST00000611855 COG1Q8WTW3 980 aa12.39□□□□□ -0.43
CDH4-202ENST00000611855 SELENOOQ9BVL4 669 aa12.39□□□□□ -0.43
CDH4-202ENST00000611855 EPN1Q9Y6I3 576 aaPredicted RBP12.39□□□□□ -0.43
CDH4-202ENST00000611855 ECM29Q5VYK3 1845 aa12.38□□□□□ -0.43
CDH4-202ENST00000611855 AMPD2Q01433 879 aa12.38□□□□□ -0.43
CDH4-202ENST00000611855 C2orf54Q08AI8 447 aa12.38□□□□□ -0.43
CDH4-202ENST00000611855 WASF1Q92558 559 aa12.38□□□□□ -0.43
CDH4-202ENST00000611855 WDR19Q8NEZ3 1342 aa12.38□□□□□ -0.43
CDH4-202ENST00000611855 TTC26A0AVF1 554 aa12.38□□□□□ -0.43
CDH4-202ENST00000611855 KCNJ18B7U540 433 aa12.38□□□□□ -0.43
CDH4-202ENST00000611855 USP14P54578 494 aa12.38□□□□□ -0.43
CDH4-202ENST00000611855 CYP27A1Q02318 531 aa12.38□□□□□ -0.43
CDH4-202ENST00000611855 ACTN3Q08043 901 aaPredicted RBP12.38□□□□□ -0.43
CDH4-202ENST00000611855 KCNJ12Q14500 433 aa12.38□□□□□ -0.43
CDH4-202ENST00000611855 AKNAD1Q5T1N1 836 aa12.38□□□□□ -0.43
CDH4-202ENST00000611855 KANK3Q6NY19 840 aa12.38□□□□□ -0.43
CDH4-202ENST00000611855 CEP57Q86XR8 500 aa12.38□□□□□ -0.43
CDH4-202ENST00000611855 ZNF654Q8IZM8 581 aa12.38□□□□□ -0.43
CDH4-202ENST00000611855 LCORLQ8N3X6 602 aa12.38□□□□□ -0.43
CDH4-202ENST00000611855 TTLL11Q8NHH1 800 aa12.38□□□□□ -0.43
CDH4-202ENST00000611855 FOXP1Q9H334 677 aaPredicted RBP12.38□□□□□ -0.43
CDH4-202ENST00000611855 V9GY48 417 aaPredicted RBP12.38□□□□□ -0.43
CDH4-202ENST00000611855 ERICH2A1L162 156 aa12.37□□□□□ -0.43
CDH4-202ENST00000611855 NDUFA10O95299 355 aa12.37□□□□□ -0.43
CDH4-202ENST00000611855 DEXIO95424 95 aa12.37□□□□□ -0.43
CDH4-202ENST00000611855 EZH2Q15910 746 aaKnown RBP12.37□□□□□ -0.43
CDH4-202ENST00000611855 ANKRD18AQ8IVF6 992 aa12.37□□□□□ -0.43
CDH4-202ENST00000611855 FANCBQ8NB91 859 aa12.37□□□□□ -0.43
CDH4-202ENST00000611855 SPATA20Q8TB22 786 aa12.37□□□□□ -0.43
CDH4-202ENST00000611855 SDR42E1Q8WUS8 393 aa12.37□□□□□ -0.43
CDH4-202ENST00000611855 NELFBQ8WX92 580 aa12.37□□□□□ -0.43
CDH4-202ENST00000611855 CTAGE1Q96RT6 745 aa12.37□□□□□ -0.43
CDH4-202ENST00000611855 RUFY1Q96T51 708 aa12.37□□□□□ -0.43
CDH4-202ENST00000611855 SMARCAL1Q9NZC9 954 aa12.37□□□□□ -0.43
CDH4-202ENST00000611855 SLC4A4Q9Y6R1 1079 aa12.37□□□□□ -0.43
CDH4-202ENST00000611855 XDHP47989 1333 aa12.37□□□□□ -0.43
CDH4-202ENST00000611855 CYP2D7A0A087X1C5 515 aa12.37□□□□□ -0.43
CDH4-202ENST00000611855 PLEKHA8P1O95397 391 aa12.37□□□□□ -0.43
CDH4-202ENST00000611855 KIAA1328Q86T90 577 aa12.37□□□□□ -0.43
CDH4-202ENST00000611855 SMCR8Q8TEV9 937 aaPredicted RBP12.37□□□□□ -0.43
CDH4-202ENST00000611855 CABS1Q96KC9 395 aa12.37□□□□□ -0.43
CDH4-202ENST00000611855 RIPOR2Q9Y4F9 1068 aa12.37□□□□□ -0.43
CDH4-202ENST00000611855 SCN11AQ9UI33 1791 aa12.37□□□□□ -0.43
CDH4-202ENST00000611855 CCDC196A0A1B0GTZ2 297 aa12.37□□□□□ -0.43
CDH4-202ENST00000611855 ERCC3P19447 782 aa12.37□□□□□ -0.43
CDH4-202ENST00000611855 MCM7P33993 719 aa12.37□□□□□ -0.43
CDH4-202ENST00000611855 KLK7P49862 253 aa12.37□□□□□ -0.43
CDH4-202ENST00000611855 PTGDRQ13258 359 aa12.37□□□□□ -0.43
CDH4-202ENST00000611855 HLFQ16534 295 aa12.37□□□□□ -0.43
CDH4-202ENST00000611855 RPAINQ86UA6 219 aa12.37□□□□□ -0.43
CDH4-202ENST00000611855 PROSER2Q86WR7 435 aaPredicted RBP12.37□□□□□ -0.43
CDH4-202ENST00000611855 POTEDQ86YR6 584 aa12.37□□□□□ -0.43
CDH4-202ENST00000611855 SLC24A3Q9HC58 644 aa12.37□□□□□ -0.43
CDH4-202ENST00000611855 JADE2Q9NQC1 790 aa12.37□□□□□ -0.43
CDH4-202ENST00000611855 CEP131Q9UPN4 1083 aa12.37□□□□□ -0.43
CDH4-202ENST00000611855 USP54Q70EL1 1684 aa12.36□□□□□ -0.43
CDH4-202ENST00000611855 RCCD1A6NED2 376 aa12.36□□□□□ -0.43
CDH4-202ENST00000611855 PDE2AO00408 941 aaPredicted RBP12.36□□□□□ -0.43
CDH4-202ENST00000611855 ADAMTS3O15072 1205 aa12.36□□□□□ -0.43
CDH4-202ENST00000611855 LIFRP42702 1097 aa12.36□□□□□ -0.43
CDH4-202ENST00000611855 SH2D3CQ8N5H7 860 aa12.36□□□□□ -0.43
CDH4-202ENST00000611855 RRP36Q96EU6 259 aaKnown RBP12.36□□□□□ -0.43
CDH4-202ENST00000611855 UBAC1Q9BSL1 405 aa12.36□□□□□ -0.43
CDH4-202ENST00000611855 LACRTQ9GZZ8 138 aa12.36□□□□□ -0.43
CDH4-202ENST00000611855 SAR1BQ9Y6B6 198 aa12.36□□□□□ -0.43
CDH4-202ENST00000611855 KDM4FA0A1W2PPD8 638 aa12.36□□□□□ -0.43
CDH4-202ENST00000611855 GSG1L2A8MUP6 293 aa12.36□□□□□ -0.43
CDH4-202ENST00000611855 PATL2C9JE40 543 aaKnown RBP12.36□□□□□ -0.43
CDH4-202ENST00000611855 SLC7A5Q01650 507 aa12.36□□□□□ -0.43
CDH4-202ENST00000611855 PPFIA1Q13136 1202 aa12.36□□□□□ -0.43
CDH4-202ENST00000611855 TTF1Q15361 905 aaPredicted RBP12.36□□□□□ -0.43
CDH4-202ENST00000611855 KCTD19Q17RG1 926 aaPredicted RBP12.36□□□□□ -0.43
CDH4-202ENST00000611855 SLC4A8Q2Y0W8 1093 aa12.36□□□□□ -0.43
CDH4-202ENST00000611855 WDR93Q6P2C0 686 aa12.36□□□□□ -0.43
CDH4-202ENST00000611855 KIRREL3Q8IZU9 778 aa12.36□□□□□ -0.43
CDH4-202ENST00000611855 HDAC7Q8WUI4 952 aa12.36□□□□□ -0.43
CDH4-202ENST00000611855 N4BP2L2Q92802 583 aaPredicted RBP12.36□□□□□ -0.43
CDH4-202ENST00000611855 MTRQ99707 1265 aa12.36□□□□□ -0.43
CDH4-202ENST00000611855 KCNG1Q9UIX4 513 aa12.36□□□□□ -0.43
CDH4-202ENST00000611855 AGPSO00116 658 aa12.36□□□□□ -0.43
CDH4-202ENST00000611855 HERVK_113P62684 666 aa12.36□□□□□ -0.43
CDH4-202ENST00000611855 TUBB2AQ13885 445 aa12.36□□□□□ -0.43
CDH4-202ENST00000611855 UBE3CQ15386 1083 aa12.36□□□□□ -0.43
CDH4-202ENST00000611855 TCP11X2Q5H9J9 407 aa12.36□□□□□ -0.43
CDH4-202ENST00000611855 RASSF8Q8NHQ8 419 aa12.36□□□□□ -0.43
CDH4-202ENST00000611855 ZNF622Q969S3 477 aaKnown RBP eCLIP12.36□□□□□ -0.43
CDH4-202ENST00000611855 JAKMIP2Q96AA8 810 aa12.36□□□□□ -0.43
CDH4-202ENST00000611855 PCMTD1Q96MG8 357 aaPredicted RBP12.36□□□□□ -0.43
CDH4-202ENST00000611855 TUBB2BQ9BVA1 445 aa12.36□□□□□ -0.43
CDH4-202ENST00000611855 EHD2Q9NZN4 543 aa12.36□□□□□ -0.43
CDH4-202ENST00000611855 RIC1Q4ADV7 1423 aa12.35□□□□□ -0.43
CDH4-202ENST00000611855 TCRBV5S4A2TA0A5A2 114 aa12.35□□□□□ -0.43
CDH4-202ENST00000611855 ATP2C2O75185 946 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms