RNA–Protein interactions for RNA: ENST00000608137.5

LINC00635-216, long intergenic non-protein coding RNA 635, humanhuman

TSL 5

Gene LINC00635, Length 660 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00635-216ENST00000608137 SHROOM1Q2M3G4 852 aaPredicted RBP11.88□□□□□ -0.51
LINC00635-216ENST00000608137 OTUD7BQ6GQQ9 843 aa11.88□□□□□ -0.51
LINC00635-216ENST00000608137 CTU1Q7Z7A3 348 aaKnown RBP11.88□□□□□ -0.51
LINC00635-216ENST00000608137 ERO1BQ86YB8 467 aa11.88□□□□□ -0.51
LINC00635-216ENST00000608137 CLEC10AQ8IUN9 316 aa11.88□□□□□ -0.51
LINC00635-216ENST00000608137 CCDC144CPQ8IYA2 1237 aa11.88□□□□□ -0.51
LINC00635-216ENST00000608137 PNMA1Q8ND90 353 aa11.88□□□□□ -0.51
LINC00635-216ENST00000608137 ZKSCAN4Q969J2 545 aaPredicted RBP11.88□□□□□ -0.51
LINC00635-216ENST00000608137 OTUD5Q96G74 571 aa11.88□□□□□ -0.51
LINC00635-216ENST00000608137 R3HDMLQ9H3Y0 253 aa11.88□□□□□ -0.51
LINC00635-216ENST00000608137 NCOA5Q9HCD5 579 aaKnown RBP11.88□□□□□ -0.51
LINC00635-216ENST00000608137 CLIP2Q9UDT6 1046 aa11.88□□□□□ -0.51
LINC00635-216ENST00000608137 ZNF112Q9UJU3 913 aa11.88□□□□□ -0.51
LINC00635-216ENST00000608137 ZBTB21Q9ULJ3 1066 aa11.88□□□□□ -0.51
LINC00635-216ENST00000608137 SMC3Q9UQE7 1217 aa11.88□□□□□ -0.51
LINC00635-216ENST00000608137 NID2Q14112 1375 aa11.88□□□□□ -0.51
LINC00635-216ENST00000608137 PHF20L1A8MW92 1017 aa11.87□□□□□ -0.51
LINC00635-216ENST00000608137 CPLX1O14810 134 aa11.87□□□□□ -0.51
LINC00635-216ENST00000608137 INPP5BP32019 993 aa11.87□□□□□ -0.51
LINC00635-216ENST00000608137 GUCY1A2P33402 732 aa11.87□□□□□ -0.51
LINC00635-216ENST00000608137 JAG1P78504 1218 aa11.87□□□□□ -0.51
LINC00635-216ENST00000608137 CPLX2Q6PUV4 134 aaKnown RBP11.87□□□□□ -0.51
LINC00635-216ENST00000608137 LRRC47Q8N1G4 583 aaKnown RBP11.87□□□□□ -0.51
LINC00635-216ENST00000608137 CTCFLQ8NI51 663 aaPredicted RBP11.87□□□□□ -0.51
LINC00635-216ENST00000608137 BRI3BPQ8WY22 251 aa11.87□□□□□ -0.51
LINC00635-216ENST00000608137 PTPN18Q99952 460 aa11.87□□□□□ -0.51
LINC00635-216ENST00000608137 LLPHQ9BRT6 129 aaKnown RBP11.87□□□□□ -0.51
LINC00635-216ENST00000608137 CWC22Q9HCG8 908 aaKnown RBP11.87□□□□□ -0.51
LINC00635-216ENST00000608137 GINM1Q9NU53 330 aa11.87□□□□□ -0.51
LINC00635-216ENST00000608137 NYAP2Q9P242 653 aa11.87□□□□□ -0.51
LINC00635-216ENST00000608137 MTMR7Q9Y216 660 aa11.87□□□□□ -0.51
LINC00635-216ENST00000608137 ATAD5Q96QE3 1844 aa11.87□□□□□ -0.51
LINC00635-216ENST00000608137 MYH4Q9Y623 1939 aa11.86□□□□□ -0.51
LINC00635-216ENST00000608137 CCL15-CCL14A0A0B4J2E2 113 aa11.86□□□□□ -0.51
LINC00635-216ENST00000608137 CCDC196A0A1B0GTZ2 297 aa11.86□□□□□ -0.51
LINC00635-216ENST00000608137 IRF6O14896 467 aa11.86□□□□□ -0.51
LINC00635-216ENST00000608137 CTNND1O60716 968 aaKnown RBP11.86□□□□□ -0.51
LINC00635-216ENST00000608137 FKTNO75072 461 aa11.86□□□□□ -0.51
LINC00635-216ENST00000608137 CDKL5O76039 1030 aa11.86□□□□□ -0.51
LINC00635-216ENST00000608137 ASNSP08243 561 aa11.86□□□□□ -0.51
LINC00635-216ENST00000608137 EEF2P13639 858 aaKnown RBP11.86□□□□□ -0.51
LINC00635-216ENST00000608137 PPATQ06203 517 aa11.86□□□□□ -0.51
LINC00635-216ENST00000608137 TROAPQ12815 778 aa11.86□□□□□ -0.51
LINC00635-216ENST00000608137 PPIL2Q13356 520 aa11.86□□□□□ -0.51
LINC00635-216ENST00000608137 PPP2R5BQ15173 497 aa11.86□□□□□ -0.51
LINC00635-216ENST00000608137 CCL15Q16663 113 aa11.86□□□□□ -0.51
LINC00635-216ENST00000608137 NOL9Q5SY16 702 aaKnown RBP11.86□□□□□ -0.51
LINC00635-216ENST00000608137 FANCBQ8NB91 859 aa11.86□□□□□ -0.51
LINC00635-216ENST00000608137 ARHGEF10LQ9HCE6 1279 aa11.86□□□□□ -0.51
LINC00635-216ENST00000608137 RBM28Q9NW13 759 aaKnown RBP11.86□□□□□ -0.51
LINC00635-216ENST00000608137 DOCK1Q14185 1865 aa11.86□□□□□ -0.51
LINC00635-216ENST00000608137 PTPDC1A2A3K4 754 aa11.85□□□□□ -0.51
LINC00635-216ENST00000608137 CETPP11597 493 aa11.85□□□□□ -0.51
LINC00635-216ENST00000608137 GJB2P29033 226 aa11.85□□□□□ -0.51
LINC00635-216ENST00000608137 CDC27P30260 824 aa11.85□□□□□ -0.51
LINC00635-216ENST00000608137 KIF5BP33176 963 aa11.85□□□□□ -0.51
LINC00635-216ENST00000608137 ADD1P35611 737 aaKnown RBP11.85□□□□□ -0.51
LINC00635-216ENST00000608137 CRHR2Q13324 411 aa11.85□□□□□ -0.51
LINC00635-216ENST00000608137 SNAPC2Q13487 334 aa11.85□□□□□ -0.51
LINC00635-216ENST00000608137 GRM4Q14833 912 aa11.85□□□□□ -0.51
LINC00635-216ENST00000608137 NSUN7Q8NE18 718 aaKnown RBP11.85□□□□□ -0.51
LINC00635-216ENST00000608137 MAP3K14Q99558 947 aa11.85□□□□□ -0.51
LINC00635-216ENST00000608137 PICK1Q9NRD5 415 aa11.85□□□□□ -0.51
LINC00635-216ENST00000608137 FAM217BQ9NTX9 383 aaPredicted RBP11.85□□□□□ -0.51
LINC00635-216ENST00000608137 CCDC85CA6NKD9 419 aa11.84□□□□□ -0.51
LINC00635-216ENST00000608137 RAD21O60216 631 aa11.84□□□□□ -0.51
LINC00635-216ENST00000608137 JAK2O60674 1132 aa11.84□□□□□ -0.51
LINC00635-216ENST00000608137 CTDNEP1O95476 244 aa11.84□□□□□ -0.51
LINC00635-216ENST00000608137 PARP1P09874 1014 aaKnown RBP11.84□□□□□ -0.51
LINC00635-216ENST00000608137 HMGN5P82970 282 aaKnown RBP11.84□□□□□ -0.51
LINC00635-216ENST00000608137 PKN2Q16513 984 aaKnown RBP11.84□□□□□ -0.51
LINC00635-216ENST00000608137 SCYL3Q8IZE3 742 aa11.84□□□□□ -0.51
LINC00635-216ENST00000608137 FAM184AQ8NB25 1140 aa11.84□□□□□ -0.51
LINC00635-216ENST00000608137 SMARCC2Q8TAQ2 1214 aa11.84□□□□□ -0.51
LINC00635-216ENST00000608137 MKL1Q969V6 931 aa11.84□□□□□ -0.51
LINC00635-216ENST00000608137 DDX11Q96FC9 970 aa11.84□□□□□ -0.51
LINC00635-216ENST00000608137 SH2D4AQ9H788 454 aa11.84□□□□□ -0.51
LINC00635-216ENST00000608137 ZCCHC17Q9NP64 241 aaKnown RBP11.84□□□□□ -0.51
LINC00635-216ENST00000608137 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.84□□□□□ -0.51
LINC00635-216ENST00000608137 KCNH4Q9UQ05 1017 aa11.84□□□□□ -0.51
LINC00635-216ENST00000608137 USP17L5A8MUK1 530 aa11.83□□□□□ -0.52
LINC00635-216ENST00000608137 DTNBO60941 627 aa11.83□□□□□ -0.52
LINC00635-216ENST00000608137 GNAQP50148 359 aa11.83□□□□□ -0.52
LINC00635-216ENST00000608137 SSRP1Q08945 709 aaKnown RBP11.83□□□□□ -0.52
LINC00635-216ENST00000608137 SLFN13Q68D06 897 aa11.83□□□□□ -0.52
LINC00635-216ENST00000608137 TMTC3Q6ZXV5 915 aa11.83□□□□□ -0.52
LINC00635-216ENST00000608137 SIAH1Q8IUQ4 282 aa11.83□□□□□ -0.52
LINC00635-216ENST00000608137 TRIM22Q8IYM9 498 aa11.83□□□□□ -0.52
LINC00635-216ENST00000608137 FAM43AQ8N2R8 423 aa11.83□□□□□ -0.52
LINC00635-216ENST00000608137 AS3MTQ9HBK9 375 aa11.83□□□□□ -0.52
LINC00635-216ENST00000608137 CIZ1Q9ULV3 898 aaPredicted RBP11.83□□□□□ -0.52
LINC00635-216ENST00000608137 SYNPO2Q9UMS6 1093 aa11.83□□□□□ -0.52
LINC00635-216ENST00000608137 KIF3AQ9Y496 699 aa11.83□□□□□ -0.52
LINC00635-216ENST00000608137 BTBD19C9JJ37 291 aa11.82□□□□□ -0.52
LINC00635-216ENST00000608137 PPFIA3O75145 1194 aa11.82□□□□□ -0.52
LINC00635-216ENST00000608137 PLEKHA8P1O95397 391 aa11.82□□□□□ -0.52
LINC00635-216ENST00000608137 PDHBP11177 359 aa11.82□□□□□ -0.52
LINC00635-216ENST00000608137 IFNAR1P17181 557 aa11.82□□□□□ -0.52
LINC00635-216ENST00000608137 DDIT3P35638 169 aa11.82□□□□□ -0.52
LINC00635-216ENST00000608137 AKAP17AQ02040 695 aaKnown RBP11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms