RNA–Protein interactions for RNA: ENST00000607836.1

AC009961.1-203, humanhuman

TSL 1 (best) BASIC

Gene AC009961.1, Length 2,520 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009961.1-203ENST00000607836 TMC6Q7Z403 805 aa17.46■□□□□ 0.39
AC009961.1-203ENST00000607836 SMYD4Q8IYR2 804 aaPredicted RBP17.46■□□□□ 0.39
AC009961.1-203ENST00000607836 PDGFDQ9GZP0 370 aaPredicted RBP17.46■□□□□ 0.39
AC009961.1-203ENST00000607836 PLCG2P16885 1265 aa17.46■□□□□ 0.38
AC009961.1-203ENST00000607836 ATP2B2Q01814 1243 aa17.46■□□□□ 0.38
AC009961.1-203ENST00000607836 INF2Q27J81 1249 aa17.46■□□□□ 0.38
AC009961.1-203ENST00000607836 LRRC8AQ8IWT6 810 aa17.46■□□□□ 0.38
AC009961.1-203ENST00000607836 TSC1Q92574 1164 aa17.46■□□□□ 0.38
AC009961.1-203ENST00000607836 ADAMTSL1Q8N6G6 1762 aa17.45■□□□□ 0.38
AC009961.1-203ENST00000607836 RAD21O60216 631 aa17.45■□□□□ 0.38
AC009961.1-203ENST00000607836 FMR1Q06787 632 aaKnown RBP eCLIP17.45■□□□□ 0.38
AC009961.1-203ENST00000607836 C2CD5Q86YS7 1000 aa17.45■□□□□ 0.38
AC009961.1-203ENST00000607836 FAM163AQ96GL9 167 aaPredicted RBP17.45■□□□□ 0.38
AC009961.1-203ENST00000607836 PALM3A6NDB9 673 aaPredicted RBP17.45■□□□□ 0.38
AC009961.1-203ENST00000607836 PDE6BP35913 854 aa17.45■□□□□ 0.38
AC009961.1-203ENST00000607836 GOLGA8FQ08AF8 430 aa17.45■□□□□ 0.38
AC009961.1-203ENST00000607836 GOLGA8DPQ0D2H9 430 aa17.45■□□□□ 0.38
AC009961.1-203ENST00000607836 KLHL10Q6JEL2 608 aa17.45■□□□□ 0.38
AC009961.1-203ENST00000607836 TMED8Q6PL24 325 aaPredicted RBP17.45■□□□□ 0.38
AC009961.1-203ENST00000607836 SLF2Q8IX21 1173 aa17.45■□□□□ 0.38
AC009961.1-203ENST00000607836 NEDD1Q8NHV4 660 aa17.45■□□□□ 0.38
AC009961.1-203ENST00000607836 SMARCE1Q969G3 411 aa17.45■□□□□ 0.38
AC009961.1-203ENST00000607836 MASTLQ96GX5 879 aa17.45■□□□□ 0.38
AC009961.1-203ENST00000607836 C16orf45Q96MC5 204 aaPredicted RBP17.45■□□□□ 0.38
AC009961.1-203ENST00000607836 PLIN2Q99541 437 aa17.45■□□□□ 0.38
AC009961.1-203ENST00000607836 BLZF1Q9H2G9 400 aa17.45■□□□□ 0.38
AC009961.1-203ENST00000607836 UQCRHLA0A096LP55 91 aa17.44■□□□□ 0.38
AC009961.1-203ENST00000607836 PP2D1A8MPX8 630 aa17.44■□□□□ 0.38
AC009961.1-203ENST00000607836 TPM3P06753 285 aa17.44■□□□□ 0.38
AC009961.1-203ENST00000607836 UQCRHP07919 91 aa17.44■□□□□ 0.38
AC009961.1-203ENST00000607836 ALDH1B1P30837 517 aa17.44■□□□□ 0.38
AC009961.1-203ENST00000607836 RBM5P52756 815 aaKnown RBP eCLIP17.44■□□□□ 0.38
AC009961.1-203ENST00000607836 FANCCQ00597 558 aa17.44■□□□□ 0.38
AC009961.1-203ENST00000607836 ZNF579Q8NAF0 562 aaKnown RBP17.44■□□□□ 0.38
AC009961.1-203ENST00000607836 ANKS1AQ92625 1134 aa17.44■□□□□ 0.38
AC009961.1-203ENST00000607836 USP27XA6NNY8 438 aa17.44■□□□□ 0.38
AC009961.1-203ENST00000607836 PARP1P09874 1014 aaKnown RBP17.44■□□□□ 0.38
AC009961.1-203ENST00000607836 CDC42EP5Q6NZY7 148 aa17.44■□□□□ 0.38
AC009961.1-203ENST00000607836 PIGSQ96S52 555 aa17.44■□□□□ 0.38
AC009961.1-203ENST00000607836 BPIFA3Q9BQP9 254 aa17.44■□□□□ 0.38
AC009961.1-203ENST00000607836 TCP11L1Q9NUJ3 509 aa17.44■□□□□ 0.38
AC009961.1-203ENST00000607836 SPTLC3Q9NUV7 552 aa17.44■□□□□ 0.38
AC009961.1-203ENST00000607836 PCDHA6Q9UN73 950 aa17.44■□□□□ 0.38
AC009961.1-203ENST00000607836 PCDHA4Q9UN74 947 aa17.44■□□□□ 0.38
AC009961.1-203ENST00000607836 PCDHA8Q9Y5H6 950 aa17.44■□□□□ 0.38
AC009961.1-203ENST00000607836 STXBP3O00186 592 aa17.43■□□□□ 0.38
AC009961.1-203ENST00000607836 MPHOSPH10O00566 681 aaKnown RBP17.43■□□□□ 0.38
AC009961.1-203ENST00000607836 SERPINC1P01008 464 aa17.43■□□□□ 0.38
AC009961.1-203ENST00000607836 CDC25BP30305 580 aa17.43■□□□□ 0.38
AC009961.1-203ENST00000607836 STX17P56962 302 aa17.43■□□□□ 0.38
AC009961.1-203ENST00000607836 ATP2C1P98194 919 aaPredicted RBP17.43■□□□□ 0.38
AC009961.1-203ENST00000607836 MYL5Q02045 173 aa17.43■□□□□ 0.38
AC009961.1-203ENST00000607836 EN1Q05925 392 aaPredicted RBP17.43■□□□□ 0.38
AC009961.1-203ENST00000607836 TMX4Q9H1E5 349 aaPredicted RBP17.43■□□□□ 0.38
AC009961.1-203ENST00000607836 TMEM60Q9H2L4 133 aa17.43■□□□□ 0.38
AC009961.1-203ENST00000607836 ZNF287Q9HBT7 754 aa17.43■□□□□ 0.38
AC009961.1-203ENST00000607836 LTBP1Q14766 1721 aa17.43■□□□□ 0.38
AC009961.1-203ENST00000607836 CCDC194A0A1B0GVG4 234 aa17.43■□□□□ 0.38
AC009961.1-203ENST00000607836 SMTNL1A8MU46 457 aa17.43■□□□□ 0.38
AC009961.1-203ENST00000607836 TMEM232C9JQI7 657 aa17.43■□□□□ 0.38
AC009961.1-203ENST00000607836 ZNF772Q68DY9 489 aaPredicted RBP17.43■□□□□ 0.38
AC009961.1-203ENST00000607836 GPCPD1Q9NPB8 672 aa17.43■□□□□ 0.38
AC009961.1-203ENST00000607836 TRMT1Q9NXH9 659 aaKnown RBP17.43■□□□□ 0.38
AC009961.1-203ENST00000607836 SKILP12757 684 aa17.42■□□□□ 0.38
AC009961.1-203ENST00000607836 RXRBP28702 533 aa17.42■□□□□ 0.38
AC009961.1-203ENST00000607836 NAPAP54920 295 aa17.42■□□□□ 0.38
AC009961.1-203ENST00000607836 EZH2Q15910 746 aaKnown RBP17.42■□□□□ 0.38
AC009961.1-203ENST00000607836 APOBEC3HQ6NTF7 200 aaKnown RBP17.42■□□□□ 0.38
AC009961.1-203ENST00000607836 PAGE5Q96GU1 130 aa17.42■□□□□ 0.38
AC009961.1-203ENST00000607836 MED15Q96RN5 788 aa17.42■□□□□ 0.38
AC009961.1-203ENST00000607836 COL11A2P13942 1736 aaPredicted RBP17.42■□□□□ 0.38
AC009961.1-203ENST00000607836 ZBTB22O15209 634 aa17.42■□□□□ 0.38
AC009961.1-203ENST00000607836 RBM10P98175 930 aaKnown RBP17.42■□□□□ 0.38
AC009961.1-203ENST00000607836 CFAP100Q494V2 611 aa17.42■□□□□ 0.38
AC009961.1-203ENST00000607836 BARHL2Q9NY43 387 aa17.42■□□□□ 0.38
AC009961.1-203ENST00000607836 CALML3P27482 149 aa17.41■□□□□ 0.38
AC009961.1-203ENST00000607836 UBASH3AP57075 661 aa17.41■□□□□ 0.38
AC009961.1-203ENST00000607836 TPM4P67936 248 aa17.41■□□□□ 0.38
AC009961.1-203ENST00000607836 COA7Q96BR5 231 aa17.41■□□□□ 0.38
AC009961.1-203ENST00000607836 HOOK1Q9UJC3 728 aaKnown RBP17.41■□□□□ 0.38
AC009961.1-203ENST00000607836 SARSP49591 514 aaKnown RBP17.41■□□□□ 0.38
AC009961.1-203ENST00000607836 GNAQP50148 359 aa17.41■□□□□ 0.38
AC009961.1-203ENST00000607836 KARSQ15046 597 aaKnown RBP17.41■□□□□ 0.38
AC009961.1-203ENST00000607836 AOC3Q16853 763 aa17.41■□□□□ 0.38
AC009961.1-203ENST00000607836 TMC4Q7Z404 712 aa17.41■□□□□ 0.38
AC009961.1-203ENST00000607836 FERMT2Q96AC1 680 aa17.41■□□□□ 0.38
AC009961.1-203ENST00000607836 SAMSN1Q9NSI8 373 aaKnown RBP17.41■□□□□ 0.38
AC009961.1-203ENST00000607836 SERPINB13Q9UIV8 391 aa17.41■□□□□ 0.38
AC009961.1-203ENST00000607836 NFE2L3Q9Y4A8 694 aa17.41■□□□□ 0.38
AC009961.1-203ENST00000607836 LRRC37AA6NMS7 1700 aa17.4■□□□□ 0.38
AC009961.1-203ENST00000607836 IKBKBO14920 756 aa17.4■□□□□ 0.38
AC009961.1-203ENST00000607836 TOP1P11387 765 aaKnown RBP17.4■□□□□ 0.38
AC009961.1-203ENST00000607836 CD44P16070 742 aaKnown RBP17.4■□□□□ 0.38
AC009961.1-203ENST00000607836 SLC16A2P36021 539 aa17.4■□□□□ 0.38
AC009961.1-203ENST00000607836 CRKP46108 304 aa17.4■□□□□ 0.38
AC009961.1-203ENST00000607836 TEKT1Q969V4 418 aa17.4■□□□□ 0.38
AC009961.1-203ENST00000607836 TMEM260Q9NX78 707 aa17.4■□□□□ 0.38
AC009961.1-203ENST00000607836 MTMR4Q9NYA4 1195 aa17.4■□□□□ 0.38
AC009961.1-203ENST00000607836 BIN2Q9UBW5 565 aaPredicted RBP17.4■□□□□ 0.38
AC009961.1-203ENST00000607836 H0YIN7 160 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms