RNA–Protein interactions for RNA: ENST00000603451.1

SQSTM1P1-201, Transcript of sequestosome 1 pseudogene 1, humanhuman

BASIC

Gene SQSTM1P1, Length 859 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1P1-201ENST00000603451 SLC1A4P43007 532 aa11.11□□□□□ -0.63
SQSTM1P1-201ENST00000603451 STAT2P52630 851 aa11.11□□□□□ -0.63
SQSTM1P1-201ENST00000603451 ANTXR2P58335 489 aa11.11□□□□□ -0.63
SQSTM1P1-201ENST00000603451 HERVK_113P62684 666 aa11.11□□□□□ -0.63
SQSTM1P1-201ENST00000603451 COG2Q14746 738 aa11.11□□□□□ -0.63
SQSTM1P1-201ENST00000603451 ARHGEF6Q15052 776 aa11.11□□□□□ -0.63
SQSTM1P1-201ENST00000603451 ASPRV1Q53RT3 343 aa11.11□□□□□ -0.63
SQSTM1P1-201ENST00000603451 BLOC1S2Q6QNY1 142 aa11.11□□□□□ -0.63
SQSTM1P1-201ENST00000603451 SGMS1Q86VZ5 419 aa11.11□□□□□ -0.63
SQSTM1P1-201ENST00000603451 RASEFQ8IZ41 740 aa11.11□□□□□ -0.63
SQSTM1P1-201ENST00000603451 LRRC47Q8N1G4 583 aaKnown RBP11.11□□□□□ -0.63
SQSTM1P1-201ENST00000603451 TANGO6Q9C0B7 1094 aa11.11□□□□□ -0.63
SQSTM1P1-201ENST00000603451 MORF4L1Q9UBU8 362 aa11.11□□□□□ -0.63
SQSTM1P1-201ENST00000603451 FEM1BQ9UK73 627 aa11.11□□□□□ -0.63
SQSTM1P1-201ENST00000603451 PNMA2Q9UL42 364 aa11.11□□□□□ -0.63
SQSTM1P1-201ENST00000603451 TAF6LQ9Y6J9 622 aa11.11□□□□□ -0.63
SQSTM1P1-201ENST00000603451 MGAMO43451 1857 aa11.1□□□□□ -0.63
SQSTM1P1-201ENST00000603451 CASP8AP2Q9UKL3 1982 aa11.1□□□□□ -0.63
SQSTM1P1-201ENST00000603451 COL11A1P12107 1806 aaPredicted RBP11.1□□□□□ -0.63
SQSTM1P1-201ENST00000603451 SH2B2O14492 632 aaPredicted RBP11.1□□□□□ -0.63
SQSTM1P1-201ENST00000603451 GNRH1P01148 92 aa11.1□□□□□ -0.63
SQSTM1P1-201ENST00000603451 PDHBP11177 359 aa11.1□□□□□ -0.63
SQSTM1P1-201ENST00000603451 COPB2P35606 906 aa11.1□□□□□ -0.63
SQSTM1P1-201ENST00000603451 OAZ1P54368 228 aa11.1□□□□□ -0.63
SQSTM1P1-201ENST00000603451 TMEM67Q5HYA8 995 aa11.1□□□□□ -0.63
SQSTM1P1-201ENST00000603451 SLFN13Q68D06 897 aa11.1□□□□□ -0.63
SQSTM1P1-201ENST00000603451 C17orf99Q6UX52 265 aa11.1□□□□□ -0.63
SQSTM1P1-201ENST00000603451 CYB5R4Q7L1T6 521 aa11.1□□□□□ -0.63
SQSTM1P1-201ENST00000603451 PRPF38AQ8NAV1 312 aaKnown RBP11.1□□□□□ -0.63
SQSTM1P1-201ENST00000603451 IGDCC4Q8TDY8 1250 aa11.1□□□□□ -0.63
SQSTM1P1-201ENST00000603451 CHURC1Q8WUH1 139 aa11.1□□□□□ -0.63
SQSTM1P1-201ENST00000603451 AGXT2Q9BYV1 514 aa11.1□□□□□ -0.63
SQSTM1P1-201ENST00000603451 PPP1R9AQ9ULJ8 1098 aa11.1□□□□□ -0.63
SQSTM1P1-201ENST00000603451 ADAMTS5Q9UNA0 930 aa11.1□□□□□ -0.63
SQSTM1P1-201ENST00000603451 RABGAP1Q9Y3P9 1069 aa11.1□□□□□ -0.63
SQSTM1P1-201ENST00000603451 NID2Q14112 1375 aa11.09□□□□□ -0.63
SQSTM1P1-201ENST00000603451 SPDYE16A6NNV3 312 aaPredicted RBP11.09□□□□□ -0.63
SQSTM1P1-201ENST00000603451 GPR25O00155 361 aa11.09□□□□□ -0.63
SQSTM1P1-201ENST00000603451 ATP2A1O14983 1001 aa11.09□□□□□ -0.63
SQSTM1P1-201ENST00000603451 FLOT1O75955 427 aa11.09□□□□□ -0.63
SQSTM1P1-201ENST00000603451 BCRP11274 1271 aa11.09□□□□□ -0.63
SQSTM1P1-201ENST00000603451 RPS6KB1P23443 525 aa11.09□□□□□ -0.63
SQSTM1P1-201ENST00000603451 DSG3P32926 999 aa11.09□□□□□ -0.63
SQSTM1P1-201ENST00000603451 RBM25P49756 843 aaKnown RBP11.09□□□□□ -0.63
SQSTM1P1-201ENST00000603451 CCNA1P78396 465 aa11.09□□□□□ -0.63
SQSTM1P1-201ENST00000603451 EXOSC10Q01780 885 aaKnown RBP11.09□□□□□ -0.63
SQSTM1P1-201ENST00000603451 PPP2R5BQ15173 497 aa11.09□□□□□ -0.63
SQSTM1P1-201ENST00000603451 ADCK5Q3MIX3 580 aa11.09□□□□□ -0.63
SQSTM1P1-201ENST00000603451 FAM83BQ5T0W9 1011 aa11.09□□□□□ -0.63
SQSTM1P1-201ENST00000603451 BTNL9Q6UXG8 535 aa11.09□□□□□ -0.63
SQSTM1P1-201ENST00000603451 RUFY3Q7L099 469 aa11.09□□□□□ -0.63
SQSTM1P1-201ENST00000603451 CATIPQ7Z7H3 387 aa11.09□□□□□ -0.63
SQSTM1P1-201ENST00000603451 SPICE1Q8N0Z3 855 aa11.09□□□□□ -0.63
SQSTM1P1-201ENST00000603451 ERO1AQ96HE7 468 aa11.09□□□□□ -0.63
SQSTM1P1-201ENST00000603451 JAKMIP1Q96N16 626 aaKnown RBP11.09□□□□□ -0.63
SQSTM1P1-201ENST00000603451 SLF1Q9BQI6 1058 aa11.09□□□□□ -0.63
SQSTM1P1-201ENST00000603451 ZKSCAN3Q9BRR0 538 aa11.09□□□□□ -0.63
SQSTM1P1-201ENST00000603451 LY9Q9HBG7 655 aa11.09□□□□□ -0.63
SQSTM1P1-201ENST00000603451 ZSWIM6Q9HCJ5 1215 aa11.09□□□□□ -0.63
SQSTM1P1-201ENST00000603451 PRDM10Q9NQV6 1147 aa11.09□□□□□ -0.63
SQSTM1P1-201ENST00000603451 CYP46A1Q9Y6A2 500 aa11.09□□□□□ -0.63
SQSTM1P1-201ENST00000603451 PCNTO95613 3336 aa11.09□□□□□ -0.63
SQSTM1P1-201ENST00000603451 RBBP6Q7Z6E9 1792 aaKnown RBP11.08□□□□□ -0.64
SQSTM1P1-201ENST00000603451 CCDC69A6NI79 296 aa11.08□□□□□ -0.64
SQSTM1P1-201ENST00000603451 FOXN1O15353 648 aa11.08□□□□□ -0.64
SQSTM1P1-201ENST00000603451 FKTNO75072 461 aa11.08□□□□□ -0.64
SQSTM1P1-201ENST00000603451 CYP2C8P10632 490 aa11.08□□□□□ -0.64
SQSTM1P1-201ENST00000603451 HSPA8P11142 646 aaKnown RBP11.08□□□□□ -0.64
SQSTM1P1-201ENST00000603451 CASTP20810 708 aaKnown RBP11.08□□□□□ -0.64
SQSTM1P1-201ENST00000603451 KIF5BP33176 963 aa11.08□□□□□ -0.64
SQSTM1P1-201ENST00000603451 SP3Q02447 781 aa11.08□□□□□ -0.64
SQSTM1P1-201ENST00000603451 ZNF543Q08ER8 600 aa11.08□□□□□ -0.64
SQSTM1P1-201ENST00000603451 TROAPQ12815 778 aa11.08□□□□□ -0.64
SQSTM1P1-201ENST00000603451 KIF22Q14807 665 aa11.08□□□□□ -0.64
SQSTM1P1-201ENST00000603451 KIAA1755Q5JYT7 1200 aa11.08□□□□□ -0.64
SQSTM1P1-201ENST00000603451 SHCBP1Q8NEM2 672 aa11.08□□□□□ -0.64
SQSTM1P1-201ENST00000603451 MAF1Q9H063 256 aa11.08□□□□□ -0.64
SQSTM1P1-201ENST00000603451 ALDH8A1Q9H2A2 487 aaPredicted RBP11.08□□□□□ -0.64
SQSTM1P1-201ENST00000603451 RAD21O60216 631 aa11.07□□□□□ -0.64
SQSTM1P1-201ENST00000603451 TBC1D8O95759 1140 aa11.07□□□□□ -0.64
SQSTM1P1-201ENST00000603451 PARP1P09874 1014 aaKnown RBP11.07□□□□□ -0.64
SQSTM1P1-201ENST00000603451 SMARCA1P28370 1054 aa11.07□□□□□ -0.64
SQSTM1P1-201ENST00000603451 MAPK4P31152 587 aa11.07□□□□□ -0.64
SQSTM1P1-201ENST00000603451 PRMT2P55345 433 aa11.07□□□□□ -0.64
SQSTM1P1-201ENST00000603451 EVCP57679 992 aa11.07□□□□□ -0.64
SQSTM1P1-201ENST00000603451 FGD1P98174 961 aa11.07□□□□□ -0.64
SQSTM1P1-201ENST00000603451 TRAF1Q13077 416 aa11.07□□□□□ -0.64
SQSTM1P1-201ENST00000603451 DGKZQ13574 1117 aa11.07□□□□□ -0.64
SQSTM1P1-201ENST00000603451 ANKRD1Q15327 319 aa11.07□□□□□ -0.64
SQSTM1P1-201ENST00000603451 CCDC96Q2M329 555 aa11.07□□□□□ -0.64
SQSTM1P1-201ENST00000603451 SYNE3Q6ZMZ3 975 aa11.07□□□□□ -0.64
SQSTM1P1-201ENST00000603451 ZNF654Q8IZM8 581 aa11.07□□□□□ -0.64
SQSTM1P1-201ENST00000603451 GPRC5AQ8NFJ5 357 aa11.07□□□□□ -0.64
SQSTM1P1-201ENST00000603451 CTCFLQ8NI51 663 aaPredicted RBP11.07□□□□□ -0.64
SQSTM1P1-201ENST00000603451 NKX2-3Q8TAU0 364 aa11.07□□□□□ -0.64
SQSTM1P1-201ENST00000603451 P2RX7Q99572 595 aaKnown RBP11.07□□□□□ -0.64
SQSTM1P1-201ENST00000603451 LZTS2Q9BRK4 669 aa11.07□□□□□ -0.64
SQSTM1P1-201ENST00000603451 SLC12A7Q9Y666 1083 aa11.07□□□□□ -0.64
SQSTM1P1-201ENST00000603451 MYH6P13533 1939 aa11.07□□□□□ -0.64
SQSTM1P1-201ENST00000603451 TMEM232C9JQI7 657 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms