RNA–Protein interactions for RNA: ENST00000602710.5

UBE2E3-209, Transcript of ubiquitin conjugating enzyme E2 E3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2E3, Length 1,556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3-209ENST00000602710 ZNF543Q08ER8 600 aa22.19■■□□□ 1.14
UBE2E3-209ENST00000602710 CCDC96Q2M329 555 aa22.19■■□□□ 1.14
UBE2E3-209ENST00000602710 TMTC3Q6ZXV5 915 aa22.19■■□□□ 1.14
UBE2E3-209ENST00000602710 NBPF11Q86T75 865 aa22.19■■□□□ 1.14
UBE2E3-209ENST00000602710 ERO1BQ86YB8 467 aa22.19■■□□□ 1.14
UBE2E3-209ENST00000602710 SRBD1Q8N5C6 995 aaKnown RBP22.19■■□□□ 1.14
UBE2E3-209ENST00000602710 SLC10A4Q96EP9 437 aa22.19■■□□□ 1.14
UBE2E3-209ENST00000602710 OTUD5Q96G74 571 aa22.19■■□□□ 1.14
UBE2E3-209ENST00000602710 CPVLQ9H3G5 476 aa22.19■■□□□ 1.14
UBE2E3-209ENST00000602710 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.19■■□□□ 1.14
UBE2E3-209ENST00000602710 SPDYE5A6NIY4 337 aa22.18■■□□□ 1.14
UBE2E3-209ENST00000602710 KLRF2D3W0D1 207 aa22.18■■□□□ 1.14
UBE2E3-209ENST00000602710 SLC1A4P43007 532 aa22.18■■□□□ 1.14
UBE2E3-209ENST00000602710 TTBK2Q6IQ55 1244 aa22.18■■□□□ 1.14
UBE2E3-209ENST00000602710 DCAF4Q8WV16 495 aa22.18■■□□□ 1.14
UBE2E3-209ENST00000602710 PHKBQ93100 1093 aa22.18■■□□□ 1.14
UBE2E3-209ENST00000602710 DDX11Q96FC9 970 aa22.18■■□□□ 1.14
UBE2E3-209ENST00000602710 GMCL1Q96IK5 515 aa22.18■■□□□ 1.14
UBE2E3-209ENST00000602710 LLPHQ9BRT6 129 aaKnown RBP22.18■■□□□ 1.14
UBE2E3-209ENST00000602710 EMILIN3Q9NT22 766 aa22.18■■□□□ 1.14
UBE2E3-209ENST00000602710 BAZ2BQ9UIF8 2168 aaKnown RBP22.18■■□□□ 1.14
UBE2E3-209ENST00000602710 PTPDC1A2A3K4 754 aa22.17■■□□□ 1.14
UBE2E3-209ENST00000602710 PPATQ06203 517 aa22.17■■□□□ 1.14
UBE2E3-209ENST00000602710 FUT2Q10981 343 aa22.17■■□□□ 1.14
UBE2E3-209ENST00000602710 SLC35G1Q2M3R5 365 aa22.17■■□□□ 1.14
UBE2E3-209ENST00000602710 ASPRV1Q53RT3 343 aa22.17■■□□□ 1.14
UBE2E3-209ENST00000602710 SMARCC2Q8TAQ2 1214 aa22.17■■□□□ 1.14
UBE2E3-209ENST00000602710 OPTNQ96CV9 577 aa22.17■■□□□ 1.14
UBE2E3-209ENST00000602710 ISY1Q9ULR0 285 aaKnown RBP22.17■■□□□ 1.14
UBE2E3-209ENST00000602710 SMC3Q9UQE7 1217 aa22.17■■□□□ 1.14
UBE2E3-209ENST00000602710 UNCXA6NJT0 531 aa22.16■■□□□ 1.14
UBE2E3-209ENST00000602710 IRF6O14896 467 aa22.16■■□□□ 1.14
UBE2E3-209ENST00000602710 IFNAR1P17181 557 aa22.16■■□□□ 1.14
UBE2E3-209ENST00000602710 CPLX2Q6PUV4 134 aaKnown RBP22.16■■□□□ 1.14
UBE2E3-209ENST00000602710 UBA5Q9GZZ9 404 aa22.16■■□□□ 1.14
UBE2E3-209ENST00000602710 BMP3P12645 472 aa22.16■■□□□ 1.14
UBE2E3-209ENST00000602710 GJB2P29033 226 aa22.16■■□□□ 1.14
UBE2E3-209ENST00000602710 GJA5P36382 358 aa22.16■■□□□ 1.14
UBE2E3-209ENST00000602710 GNAQP50148 359 aa22.16■■□□□ 1.14
UBE2E3-209ENST00000602710 HMGCS2P54868 508 aa22.16■■□□□ 1.14
UBE2E3-209ENST00000602710 FAM83BQ5T0W9 1011 aa22.16■■□□□ 1.14
UBE2E3-209ENST00000602710 PTPRFP10586 1907 aa22.15■■□□□ 1.14
UBE2E3-209ENST00000602710 CYTH3O43739 400 aa22.15■■□□□ 1.14
UBE2E3-209ENST00000602710 FDPSP14324 419 aaKnown RBP22.15■■□□□ 1.14
UBE2E3-209ENST00000602710 SLC16A2P36021 539 aa22.15■■□□□ 1.14
UBE2E3-209ENST00000602710 USP14P54578 494 aa22.15■■□□□ 1.14
UBE2E3-209ENST00000602710 HUNKP57058 714 aa22.15■■□□□ 1.14
UBE2E3-209ENST00000602710 GPATCH4Q5T3I0 446 aaKnown RBP22.15■■□□□ 1.14
UBE2E3-209ENST00000602710 SLC26A6Q9BXS9 759 aa22.15■■□□□ 1.14
UBE2E3-209ENST00000602710 CNTNAP5Q8WYK1 1306 aa22.15■■□□□ 1.14
UBE2E3-209ENST00000602710 hCG_1642624A0A1W2PR95 340 aa22.14■■□□□ 1.13
UBE2E3-209ENST00000602710 C19orf81C9J6K1 198 aa22.14■■□□□ 1.13
UBE2E3-209ENST00000602710 CDKL5O76039 1030 aa22.14■■□□□ 1.13
UBE2E3-209ENST00000602710 PPIL2Q13356 520 aa22.14■■□□□ 1.13
UBE2E3-209ENST00000602710 PIBF1Q8WXW3 757 aa22.14■■□□□ 1.13
UBE2E3-209ENST00000602710 LPAR1Q92633 364 aa22.14■■□□□ 1.13
UBE2E3-209ENST00000602710 TMEM232C9JQI7 657 aa22.13■■□□□ 1.13
UBE2E3-209ENST00000602710 FMNL1O95466 1100 aaPredicted RBP22.13■■□□□ 1.13
UBE2E3-209ENST00000602710 SSRP1Q08945 709 aaKnown RBP22.13■■□□□ 1.13
UBE2E3-209ENST00000602710 LZTS2Q9BRK4 669 aa22.13■■□□□ 1.13
UBE2E3-209ENST00000602710 VAT1LQ9HCJ6 419 aa22.13■■□□□ 1.13
UBE2E3-209ENST00000602710 ORC3Q9UBD5 711 aaPredicted RBP22.13■■□□□ 1.13
UBE2E3-209ENST00000602710 V9GY48 417 aaPredicted RBP22.13■■□□□ 1.13
UBE2E3-209ENST00000602710 VCAM1P19320 739 aa22.12■■□□□ 1.13
UBE2E3-209ENST00000602710 FSTL1Q12841 308 aa22.12■■□□□ 1.13
UBE2E3-209ENST00000602710 SH3D19Q5HYK7 790 aa22.12■■□□□ 1.13
UBE2E3-209ENST00000602710 SAPCD2Q86UD0 394 aa22.12■■□□□ 1.13
UBE2E3-209ENST00000602710 KCNH4Q9UQ05 1017 aa22.12■■□□□ 1.13
UBE2E3-209ENST00000602710 MYH6P13533 1939 aa22.12■■□□□ 1.13
UBE2E3-209ENST00000602710 WDR46O15213 610 aaKnown RBP22.12■■□□□ 1.13
UBE2E3-209ENST00000602710 HMGN5P82970 282 aaKnown RBP22.12■■□□□ 1.13
UBE2E3-209ENST00000602710 WNK4Q96J92 1243 aa22.12■■□□□ 1.13
UBE2E3-209ENST00000602710 C12orf42Q96LP6 360 aa22.12■■□□□ 1.13
UBE2E3-209ENST00000602710 SPZ1Q9BXG8 430 aa22.12■■□□□ 1.13
UBE2E3-209ENST00000602710 TMOD4Q9NZQ9 345 aa22.12■■□□□ 1.13
UBE2E3-209ENST00000602710 CXCL11O14625 94 aa22.11■■□□□ 1.13
UBE2E3-209ENST00000602710 MKRN3Q13064 507 aaKnown RBP22.11■■□□□ 1.13
UBE2E3-209ENST00000602710 IKQ13123 557 aaPredicted RBP22.11■■□□□ 1.13
UBE2E3-209ENST00000602710 TRIM22Q8IYM9 498 aa22.11■■□□□ 1.13
UBE2E3-209ENST00000602710 ADGRF4Q8IZF3 695 aa22.11■■□□□ 1.13
UBE2E3-209ENST00000602710 AIFM3Q96NN9 605 aa22.11■■□□□ 1.13
UBE2E3-209ENST00000602710 RNF26Q9BY78 433 aaPredicted RBP22.11■■□□□ 1.13
UBE2E3-209ENST00000602710 RPAP3Q9H6T3 665 aaPredicted RBP22.11■■□□□ 1.13
UBE2E3-209ENST00000602710 RIOX1Q9H6W3 641 aa22.11■■□□□ 1.13
UBE2E3-209ENST00000602710 CWC22Q9HCG8 908 aaKnown RBP22.11■■□□□ 1.13
UBE2E3-209ENST00000602710 FBXO28Q9NVF7 368 aa22.11■■□□□ 1.13
UBE2E3-209ENST00000602710 A0A0G2JLL6 359 aaPredicted RBP22.1■■□□□ 1.13
UBE2E3-209ENST00000602710 PRPF3O43395 683 aaKnown RBP22.1■■□□□ 1.13
UBE2E3-209ENST00000602710 SMARCA1P28370 1054 aa22.1■■□□□ 1.13
UBE2E3-209ENST00000602710 PRRT2Q7Z6L0 340 aaPredicted RBP22.1■■□□□ 1.13
UBE2E3-209ENST00000602710 FAM184AQ8NB25 1140 aa22.1■■□□□ 1.13
UBE2E3-209ENST00000602710 DDIT3P35638 169 aa22.09■■□□□ 1.13
UBE2E3-209ENST00000602710 STAT2P52630 851 aa22.09■■□□□ 1.13
UBE2E3-209ENST00000602710 FOSBP53539 338 aa22.09■■□□□ 1.13
UBE2E3-209ENST00000602710 PKN1Q16512 942 aa22.09■■□□□ 1.13
UBE2E3-209ENST00000602710 BTNL9Q6UXG8 535 aa22.09■■□□□ 1.13
UBE2E3-209ENST00000602710 TANGO6Q9C0B7 1094 aa22.09■■□□□ 1.13
UBE2E3-209ENST00000602710 JMJD4Q9H9V9 463 aa22.09■■□□□ 1.13
UBE2E3-209ENST00000602710 TLL2Q9Y6L7 1015 aa22.09■■□□□ 1.13
UBE2E3-209ENST00000602710 STK36Q9NRP7 1315 aa22.09■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms