RNA–Protein interactions for RNA: ENST00000602169.1

CALM3-213, Transcript of calmodulin 3, humanhuman

TSL 2

Gene CALM3, Length 590 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALM3-213ENST00000602169 APOA5Q6Q788 366 aa15.52■□□□□ 0.08
CALM3-213ENST00000602169 SYNE3Q6ZMZ3 975 aa15.52■□□□□ 0.08
CALM3-213ENST00000602169 ZNF654Q8IZM8 581 aa15.52■□□□□ 0.08
CALM3-213ENST00000602169 BRF1Q92994 677 aa15.52■□□□□ 0.08
CALM3-213ENST00000602169 ZNF274Q96GC6 653 aaPredicted RBP15.52■□□□□ 0.08
CALM3-213ENST00000602169 GPHNQ9NQX3 736 aaPredicted RBP15.52■□□□□ 0.08
CALM3-213ENST00000602169 USP17L15C9J2P7 530 aa15.51■□□□□ 0.07
CALM3-213ENST00000602169 USP17L13C9JLJ4 530 aa15.51■□□□□ 0.07
CALM3-213ENST00000602169 USP17L11C9JVI0 530 aa15.51■□□□□ 0.07
CALM3-213ENST00000602169 USP17L18D6R9N7 530 aa15.51■□□□□ 0.07
CALM3-213ENST00000602169 USP17L22D6RA61 530 aa15.51■□□□□ 0.07
CALM3-213ENST00000602169 USP17L17D6RBQ6 530 aa15.51■□□□□ 0.07
CALM3-213ENST00000602169 USP17L19D6RCP7 530 aa15.51■□□□□ 0.07
CALM3-213ENST00000602169 USP17L20D6RJB6 530 aa15.51■□□□□ 0.07
CALM3-213ENST00000602169 ST18O60284 1047 aa15.51■□□□□ 0.07
CALM3-213ENST00000602169 ALDH1A1P00352 501 aa15.51■□□□□ 0.07
CALM3-213ENST00000602169 BMP3P12645 472 aa15.51■□□□□ 0.07
CALM3-213ENST00000602169 SLC1A4P43007 532 aa15.51■□□□□ 0.07
CALM3-213ENST00000602169 MCM2P49736 904 aa15.51■□□□□ 0.07
CALM3-213ENST00000602169 KIF23Q02241 960 aaPredicted RBP15.51■□□□□ 0.07
CALM3-213ENST00000602169 ZNF543Q08ER8 600 aa15.51■□□□□ 0.07
CALM3-213ENST00000602169 USP17L24Q0WX57 530 aa15.51■□□□□ 0.07
CALM3-213ENST00000602169 ASPRV1Q53RT3 343 aa15.51■□□□□ 0.07
CALM3-213ENST00000602169 KIAA1755Q5JYT7 1200 aa15.51■□□□□ 0.07
CALM3-213ENST00000602169 NFXL1Q6ZNB6 911 aa15.51■□□□□ 0.07
CALM3-213ENST00000602169 TCEANC2Q96MN5 208 aa15.51■□□□□ 0.07
CALM3-213ENST00000602169 LRRC2Q9BYS8 371 aa15.51■□□□□ 0.07
CALM3-213ENST00000602169 SENP2Q9HC62 589 aa15.51■□□□□ 0.07
CALM3-213ENST00000602169 BTBD19C9JJ37 291 aa15.5■□□□□ 0.07
CALM3-213ENST00000602169 SMARCA1P28370 1054 aa15.5■□□□□ 0.07
CALM3-213ENST00000602169 KIF5BP33176 963 aa15.5■□□□□ 0.07
CALM3-213ENST00000602169 GRM4Q14833 912 aa15.5■□□□□ 0.07
CALM3-213ENST00000602169 BTNL9Q6UXG8 535 aa15.5■□□□□ 0.07
CALM3-213ENST00000602169 LBX2Q6XYB7 198 aa15.5■□□□□ 0.07
CALM3-213ENST00000602169 CATSPERGQ6ZRH7 1159 aa15.5■□□□□ 0.07
CALM3-213ENST00000602169 IFNL1Q8IU54 200 aa15.5■□□□□ 0.07
CALM3-213ENST00000602169 GTF3C2Q8WUA4 911 aaPredicted RBP15.5■□□□□ 0.07
CALM3-213ENST00000602169 PTPN18Q99952 460 aa15.5■□□□□ 0.07
CALM3-213ENST00000602169 LZTS2Q9BRK4 669 aa15.5■□□□□ 0.07
CALM3-213ENST00000602169 CFHR5Q9BXR6 569 aa15.5■□□□□ 0.07
CALM3-213ENST00000602169 PRDM10Q9NQV6 1147 aa15.5■□□□□ 0.07
CALM3-213ENST00000602169 HOXC10Q9NYD6 342 aa15.5■□□□□ 0.07
CALM3-213ENST00000602169 FEM1BQ9UK73 627 aa15.5■□□□□ 0.07
CALM3-213ENST00000602169 PNMA3Q9UL41 463 aa15.5■□□□□ 0.07
CALM3-213ENST00000602169 BRPF3Q9ULD4 1205 aa15.5■□□□□ 0.07
CALM3-213ENST00000602169 KLF18A0A0U1RQI7 1052 aa15.49■□□□□ 0.07
CALM3-213ENST00000602169 CCDC196A0A1B0GTZ2 297 aa15.49■□□□□ 0.07
CALM3-213ENST00000602169 PALM3A6NDB9 673 aaPredicted RBP15.49■□□□□ 0.07
CALM3-213ENST00000602169 ZBTB43O43298 467 aa15.49■□□□□ 0.07
CALM3-213ENST00000602169 PARP1P09874 1014 aaKnown RBP15.49■□□□□ 0.07
CALM3-213ENST00000602169 FDX1P10109 184 aa15.49■□□□□ 0.07
CALM3-213ENST00000602169 GNAQP50148 359 aa15.49■□□□□ 0.07
CALM3-213ENST00000602169 MKRN3Q13064 507 aaKnown RBP15.49■□□□□ 0.07
CALM3-213ENST00000602169 ZYXQ15942 572 aaKnown RBP15.49■□□□□ 0.07
CALM3-213ENST00000602169 GADL1Q6ZQY3 521 aa15.49■□□□□ 0.07
CALM3-213ENST00000602169 FAM160B2Q86V87 743 aa15.49■□□□□ 0.07
CALM3-213ENST00000602169 SPICE1Q8N0Z3 855 aa15.49■□□□□ 0.07
CALM3-213ENST00000602169 FANCBQ8NB91 859 aa15.49■□□□□ 0.07
CALM3-213ENST00000602169 CTCFLQ8NI51 663 aaPredicted RBP15.49■□□□□ 0.07
CALM3-213ENST00000602169 CHURC1Q8WUH1 139 aa15.49■□□□□ 0.07
CALM3-213ENST00000602169 CHMP4CQ96CF2 233 aa15.49■□□□□ 0.07
CALM3-213ENST00000602169 BEGAINQ9BUH8 593 aa15.49■□□□□ 0.07
CALM3-213ENST00000602169 RPAP3Q9H6T3 665 aaPredicted RBP15.49■□□□□ 0.07
CALM3-213ENST00000602169 RBM28Q9NW13 759 aaKnown RBP15.49■□□□□ 0.07
CALM3-213ENST00000602169 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.49■□□□□ 0.07
CALM3-213ENST00000602169 CASP8AP2Q9UKL3 1982 aa15.49■□□□□ 0.07
CALM3-213ENST00000602169 LOC285556D6RIA3 1793 aa15.49■□□□□ 0.07
CALM3-213ENST00000602169 OSBPP22059 807 aa15.48■□□□□ 0.07
CALM3-213ENST00000602169 AK2P54819 239 aa15.48■□□□□ 0.07
CALM3-213ENST00000602169 COG2Q14746 738 aa15.48■□□□□ 0.07
CALM3-213ENST00000602169 FAM83BQ5T0W9 1011 aa15.48■□□□□ 0.07
CALM3-213ENST00000602169 TREML2Q5T2D2 321 aa15.48■□□□□ 0.07
CALM3-213ENST00000602169 FAM43AQ8N2R8 423 aa15.48■□□□□ 0.07
CALM3-213ENST00000602169 PRPF38AQ8NAV1 312 aaKnown RBP15.48■□□□□ 0.07
CALM3-213ENST00000602169 PARK7Q99497 189 aaKnown RBP15.48■□□□□ 0.07
CALM3-213ENST00000602169 MAD2L2Q9UI95 211 aa15.48■□□□□ 0.07
CALM3-213ENST00000602169 ADAMTS5Q9UNA0 930 aa15.48■□□□□ 0.07
CALM3-213ENST00000602169 PDHXO00330 501 aa15.47■□□□□ 0.07
CALM3-213ENST00000602169 IGF2BP3O00425 579 aaKnown RBP eCLIP15.47■□□□□ 0.07
CALM3-213ENST00000602169 PDIA3P30101 505 aaKnown RBP15.47■□□□□ 0.07
CALM3-213ENST00000602169 STAT2P52630 851 aa15.47■□□□□ 0.07
CALM3-213ENST00000602169 IRX3P78415 501 aaPredicted RBP15.47■□□□□ 0.07
CALM3-213ENST00000602169 APOBRQ0VD83 1088 aa15.47■□□□□ 0.07
CALM3-213ENST00000602169 MB21D1Q8N884 522 aa15.47■□□□□ 0.07
CALM3-213ENST00000602169 ZSCAN31Q96LW9 406 aaPredicted RBP15.47■□□□□ 0.07
CALM3-213ENST00000602169 SLF1Q9BQI6 1058 aa15.47■□□□□ 0.07
CALM3-213ENST00000602169 ASCC2Q9H1I8 757 aaPredicted RBP15.47■□□□□ 0.07
CALM3-213ENST00000602169 SH2B1Q9NRF2 756 aaPredicted RBP15.47■□□□□ 0.07
CALM3-213ENST00000602169 PNMA2Q9UL42 364 aa15.47■□□□□ 0.07
CALM3-213ENST00000602169 PPP1R9AQ9ULJ8 1098 aa15.47■□□□□ 0.07
CALM3-213ENST00000602169 LIMCH1Q9UPQ0 1083 aa15.47■□□□□ 0.07
CALM3-213ENST00000602169 HPS5Q9UPZ3 1129 aa15.47■□□□□ 0.07
CALM3-213ENST00000602169 PTPRFP10586 1907 aa15.47■□□□□ 0.07
CALM3-213ENST00000602169 GOLGA8BA8MQT2 603 aa15.46■□□□□ 0.07
CALM3-213ENST00000602169 CA12O43570 354 aa15.46■□□□□ 0.07
CALM3-213ENST00000602169 DHX16O60231 1041 aaKnown RBP15.46■□□□□ 0.07
CALM3-213ENST00000602169 FLOT1O75955 427 aa15.46■□□□□ 0.07
CALM3-213ENST00000602169 GCLCP48506 637 aaPredicted RBP15.46■□□□□ 0.07
CALM3-213ENST00000602169 METAP2P50579 478 aaKnown RBP eCLIP15.46■□□□□ 0.072e-7■■□□□ 12.5
CALM3-213ENST00000602169 DGKZQ13574 1117 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms