RNA–Protein interactions for RNA: ENST00000601170.5

SMG9-211, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG9, Length 2,387 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-211ENST00000601170 PPP2R3AQ06190 1150 aa16.38■□□□□ 0.21
SMG9-211ENST00000601170 RRAGBQ5VZM2 374 aa16.38■□□□□ 0.21
SMG9-211ENST00000601170 BARGINQ6ZT62 677 aa16.38■□□□□ 0.21
SMG9-211ENST00000601170 PYM1Q9BRP8 204 aaKnown RBP16.38■□□□□ 0.21
SMG9-211ENST00000601170 MCM9Q9NXL9 1143 aa16.38■□□□□ 0.21
SMG9-211ENST00000601170 CASP14P31944 242 aa16.37■□□□□ 0.21
SMG9-211ENST00000601170 CCT6AP40227 531 aaKnown RBP16.37■□□□□ 0.21
SMG9-211ENST00000601170 TMCO3Q6UWJ1 677 aa16.37■□□□□ 0.21
SMG9-211ENST00000601170 CCDC12Q8WUD4 166 aaPredicted RBP16.37■□□□□ 0.21
SMG9-211ENST00000601170 IRX2Q9BZI1 471 aaPredicted RBP16.37■□□□□ 0.21
SMG9-211ENST00000601170 ANKRD2Q9GZV1 360 aa16.37■□□□□ 0.21
SMG9-211ENST00000601170 ST7Q9NRC1 585 aa16.37■□□□□ 0.21
SMG9-211ENST00000601170 ADGRG1Q9Y653 693 aa16.37■□□□□ 0.21
SMG9-211ENST00000601170 GTPBP6O43824 516 aaPredicted RBP16.37■□□□□ 0.21
SMG9-211ENST00000601170 ZRANB2O95218 330 aaKnown RBP eCLIP16.37■□□□□ 0.21
SMG9-211ENST00000601170 TPM1P09493 284 aa16.37■□□□□ 0.21
SMG9-211ENST00000601170 USP17L8P0C7I0 530 aa16.37■□□□□ 0.21
SMG9-211ENST00000601170 ZNF771Q7L3S4 317 aaPredicted RBP16.37■□□□□ 0.21
SMG9-211ENST00000601170 TXNRD3Q86VQ6 643 aa16.37■□□□□ 0.21
SMG9-211ENST00000601170 CCDC24Q8N4L8 307 aa16.37■□□□□ 0.21
SMG9-211ENST00000601170 NYXQ9GZU5 481 aa16.37■□□□□ 0.21
SMG9-211ENST00000601170 EPC1Q9H2F5 836 aa16.37■□□□□ 0.21
SMG9-211ENST00000601170 KAT14Q9H8E8 782 aa16.37■□□□□ 0.21
SMG9-211ENST00000601170 LZTFL1Q9NQ48 299 aa16.37■□□□□ 0.21
SMG9-211ENST00000601170 FAM205AQ6ZU69 1335 aa16.37■□□□□ 0.21
SMG9-211ENST00000601170 CNTNAP4Q9C0A0 1308 aa16.37■□□□□ 0.21
SMG9-211ENST00000601170 MYH8P13535 1937 aa16.36■□□□□ 0.21
SMG9-211ENST00000601170 GYPCP04921 128 aa16.36■□□□□ 0.21
SMG9-211ENST00000601170 PNMA6AP0CW24 399 aaPredicted RBP16.36■□□□□ 0.21
SMG9-211ENST00000601170 CALML3P27482 149 aa16.36■□□□□ 0.21
SMG9-211ENST00000601170 KRT31Q15323 416 aa16.36■□□□□ 0.21
SMG9-211ENST00000601170 TERF2Q15554 542 aa16.36■□□□□ 0.21
SMG9-211ENST00000601170 DZIP1Q86YF9 867 aaKnown RBP16.36■□□□□ 0.21
SMG9-211ENST00000601170 BLIDQ8IZY5 108 aa16.36■□□□□ 0.21
SMG9-211ENST00000601170 GPKOWQ92917 476 aaPredicted RBP eCLIP16.36■□□□□ 0.21
SMG9-211ENST00000601170 SRP68Q9UHB9 627 aaKnown RBP16.36■□□□□ 0.21
SMG9-211ENST00000601170 ITIH6Q6UXX5 1313 aa16.36■□□□□ 0.21
SMG9-211ENST00000601170 A0A0U1RQJ8 604 aa16.36■□□□□ 0.21
SMG9-211ENST00000601170 NUTM2BA6NNL0 878 aaPredicted RBP16.36■□□□□ 0.21
SMG9-211ENST00000601170 NUTM2EB1AL46 878 aaPredicted RBP16.36■□□□□ 0.21
SMG9-211ENST00000601170 FXR1P51114 621 aaKnown RBP eCLIP16.36■□□□□ 0.21
SMG9-211ENST00000601170 TFAP4Q01664 338 aa16.36■□□□□ 0.21
SMG9-211ENST00000601170 ARL6IP4Q66PJ3 421 aaKnown RBP16.36■□□□□ 0.21
SMG9-211ENST00000601170 NBPF5PQ86XG9 351 aaPredicted RBP16.36■□□□□ 0.21
SMG9-211ENST00000601170 CNGA4Q8IV77 575 aa16.36■□□□□ 0.21
SMG9-211ENST00000601170 ATRIPQ8WXE1 791 aa16.36■□□□□ 0.21
SMG9-211ENST00000601170 SETDB2Q96T68 719 aa16.36■□□□□ 0.21
SMG9-211ENST00000601170 LIMA1Q9UHB6 759 aaKnown RBP16.36■□□□□ 0.21
SMG9-211ENST00000601170 RWDD2AQ9UIY3 292 aa16.36■□□□□ 0.21
SMG9-211ENST00000601170 COL24A1Q17RW2 1714 aa16.36■□□□□ 0.21
SMG9-211ENST00000601170 CDC25AP30304 524 aa16.35■□□□□ 0.21
SMG9-211ENST00000601170 LONP1P36776 959 aaKnown RBP16.35■□□□□ 0.21
SMG9-211ENST00000601170 PAK1Q13153 545 aa16.35■□□□□ 0.21
SMG9-211ENST00000601170 TEX35Q5T0J7 233 aa16.35■□□□□ 0.21
SMG9-211ENST00000601170 ZNF658Q5TYW1 1059 aaPredicted RBP16.35■□□□□ 0.21
SMG9-211ENST00000601170 PNMA1Q8ND90 353 aa16.35■□□□□ 0.21
SMG9-211ENST00000601170 IL17RBQ9NRM6 502 aa16.35■□□□□ 0.21
SMG9-211ENST00000601170 N4BP3O15049 544 aa16.35■□□□□ 0.21
SMG9-211ENST00000601170 STAG2Q8N3U4 1231 aa16.35■□□□□ 0.21
SMG9-211ENST00000601170 C4orf32Q8N8J7 132 aa16.35■□□□□ 0.21
SMG9-211ENST00000601170 RASGRP4Q8TDF6 673 aa16.35■□□□□ 0.21
SMG9-211ENST00000601170 NARFQ9UHQ1 456 aa16.35■□□□□ 0.21
SMG9-211ENST00000601170 PCDHA4Q9UN74 947 aa16.35■□□□□ 0.21
SMG9-211ENST00000601170 RGL2O15211 777 aa16.34■□□□□ 0.21
SMG9-211ENST00000601170 RPN1P04843 607 aaKnown RBP16.34■□□□□ 0.21
SMG9-211ENST00000601170 TXLNAP40222 546 aa16.34■□□□□ 0.21
SMG9-211ENST00000601170 RSRC2Q7L4I2 434 aaKnown RBP16.34■□□□□ 0.21
SMG9-211ENST00000601170 RASGRP2Q7LDG7 609 aa16.34■□□□□ 0.21
SMG9-211ENST00000601170 NELFBQ8WX92 580 aa16.34■□□□□ 0.21
SMG9-211ENST00000601170 CCDC51Q96ER9 411 aa16.34■□□□□ 0.21
SMG9-211ENST00000601170 VPS16Q9H269 839 aa16.34■□□□□ 0.21
SMG9-211ENST00000601170 RMND1Q9NWS8 449 aa16.34■□□□□ 0.21
SMG9-211ENST00000601170 LRRC10BA6NIK2 292 aa16.34■□□□□ 0.21
SMG9-211ENST00000601170 SEC31AO94979 1220 aaKnown RBP16.34■□□□□ 0.21
SMG9-211ENST00000601170 STAT6P42226 847 aa16.34■□□□□ 0.21
SMG9-211ENST00000601170 SPAG1Q07617 926 aa16.34■□□□□ 0.21
SMG9-211ENST00000601170 C12orf60Q5U649 245 aa16.34■□□□□ 0.21
SMG9-211ENST00000601170 TYW1BQ6NUM6 668 aa16.34■□□□□ 0.21
SMG9-211ENST00000601170 DGKHQ86XP1 1220 aa16.34■□□□□ 0.21
SMG9-211ENST00000601170 GPR161Q8N6U8 529 aaKnown RBP16.34■□□□□ 0.21
SMG9-211ENST00000601170 DYNLL2Q96FJ2 89 aa16.34■□□□□ 0.21
SMG9-211ENST00000601170 SH3GLB2Q9NR46 395 aa16.34■□□□□ 0.21
SMG9-211ENST00000601170 TAB2Q9NYJ8 693 aa16.34■□□□□ 0.21
SMG9-211ENST00000601170 MAPK8IP1Q9UQF2 711 aa16.34■□□□□ 0.21
SMG9-211ENST00000601170 GDAQ9Y2T3 454 aa16.34■□□□□ 0.21
SMG9-211ENST00000601170 USP5P45974 858 aa16.33■□□□□ 0.2
SMG9-211ENST00000601170 PLA2G4AP47712 749 aa16.33■□□□□ 0.2
SMG9-211ENST00000601170 COPB1P53618 953 aaKnown RBP16.33■□□□□ 0.2
SMG9-211ENST00000601170 TCP11X2Q5H9J9 407 aa16.33■□□□□ 0.2
SMG9-211ENST00000601170 TMED8Q6PL24 325 aaPredicted RBP16.33■□□□□ 0.2
SMG9-211ENST00000601170 CREBRFQ8IUR6 639 aa16.33■□□□□ 0.2
SMG9-211ENST00000601170 MKRN1Q9UHC7 482 aaKnown RBP16.33■□□□□ 0.2
SMG9-211ENST00000601170 KCNJ18B7U540 433 aa16.33■□□□□ 0.2
SMG9-211ENST00000601170 KIF5CO60282 957 aa16.33■□□□□ 0.2
SMG9-211ENST00000601170 FECHP22830 423 aa16.33■□□□□ 0.2
SMG9-211ENST00000601170 KCNJ12Q14500 433 aa16.33■□□□□ 0.2
SMG9-211ENST00000601170 SPTY2D1Q68D10 685 aaPredicted RBP16.33■□□□□ 0.2
SMG9-211ENST00000601170 DISC1Q9NRI5 854 aa16.33■□□□□ 0.2
SMG9-211ENST00000601170 ABHD10Q9NUJ1 306 aa16.33■□□□□ 0.2
SMG9-211ENST00000601170 IRS2Q9Y4H2 1338 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms