RNA–Protein interactions for RNA: ENST00000600387.5

ARHGEF1-221, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene ARHGEF1, Length 2,272 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-221ENST00000600387 TSR1Q2NL82 804 aaKnown RBP20.98■□□□□ 0.95
ARHGEF1-221ENST00000600387 ZNF658Q5TYW1 1059 aaPredicted RBP20.98■□□□□ 0.95
ARHGEF1-221ENST00000600387 NELFBQ8WX92 580 aa20.98■□□□□ 0.95
ARHGEF1-221ENST00000600387 MMS19Q96T76 1030 aa20.98■□□□□ 0.95
ARHGEF1-221ENST00000600387 UBAC1Q9BSL1 405 aa20.98■□□□□ 0.95
ARHGEF1-221ENST00000600387 CRACR2AQ9BSW2 395 aa20.98■□□□□ 0.95
ARHGEF1-221ENST00000600387 JRKLQ9Y4A0 524 aa20.98■□□□□ 0.95
ARHGEF1-221ENST00000600387 SHOX2O60902 331 aaPredicted RBP20.97■□□□□ 0.95
ARHGEF1-221ENST00000600387 KRT83P78385 493 aa20.97■□□□□ 0.95
ARHGEF1-221ENST00000600387 CHRNA2Q15822 529 aa20.97■□□□□ 0.95
ARHGEF1-221ENST00000600387 E2F4Q16254 413 aa20.97■□□□□ 0.95
ARHGEF1-221ENST00000600387 SPATA5Q8NB90 893 aa20.97■□□□□ 0.95
ARHGEF1-221ENST00000600387 DNAJC7Q99615 494 aa20.97■□□□□ 0.95
ARHGEF1-221ENST00000600387 VPS54Q9P1Q0 977 aa20.97■□□□□ 0.95
ARHGEF1-221ENST00000600387 TRIM10Q9UDY6 481 aa20.97■□□□□ 0.95
ARHGEF1-221ENST00000600387 DISP2A7MBM2 1401 aa20.97■□□□□ 0.95
ARHGEF1-221ENST00000600387 ATP1A1P05023 1023 aaKnown RBP20.97■□□□□ 0.95
ARHGEF1-221ENST00000600387 EIF5P55010 431 aaKnown RBP20.97■□□□□ 0.95
ARHGEF1-221ENST00000600387 CTSWP56202 376 aa20.97■□□□□ 0.95
ARHGEF1-221ENST00000600387 CCDC122Q5T0U0 273 aa20.97■□□□□ 0.95
ARHGEF1-221ENST00000600387 ZCRB1Q8TBF4 217 aaKnown RBP20.97■□□□□ 0.95
ARHGEF1-221ENST00000600387 LUC7L2Q9Y383 392 aaKnown RBP20.97■□□□□ 0.95
ARHGEF1-221ENST00000600387 PNPLA7Q6ZV29 1317 aa20.96■□□□□ 0.95
ARHGEF1-221ENST00000600387 A0A1W2PQC6 194 aa20.96■□□□□ 0.95
ARHGEF1-221ENST00000600387 H7C1D1 291 aa20.96■□□□□ 0.95
ARHGEF1-221ENST00000600387 ENC1O14682 589 aa20.96■□□□□ 0.95
ARHGEF1-221ENST00000600387 PRPF3O43395 683 aaKnown RBP20.96■□□□□ 0.95
ARHGEF1-221ENST00000600387 ATP2C1P98194 919 aaPredicted RBP20.96■□□□□ 0.95
ARHGEF1-221ENST00000600387 PUM3Q15397 648 aaKnown RBP20.96■□□□□ 0.95
ARHGEF1-221ENST00000600387 PKN1Q16512 942 aa20.96■□□□□ 0.95
ARHGEF1-221ENST00000600387 EARS2Q5JPH6 523 aaKnown RBP20.96■□□□□ 0.95
ARHGEF1-221ENST00000600387 LPIN2Q92539 896 aa20.96■□□□□ 0.95
ARHGEF1-221ENST00000600387 SHISA4Q96DD7 197 aa20.96■□□□□ 0.95
ARHGEF1-221ENST00000600387 HDAC6Q9UBN7 1215 aa20.96■□□□□ 0.95
ARHGEF1-221ENST00000600387 ZNF330Q9Y3S2 320 aaPredicted RBP20.96■□□□□ 0.95
ARHGEF1-221ENST00000600387 A0A087WUV0 522 aaPredicted RBP20.95■□□□□ 0.95
ARHGEF1-221ENST00000600387 KRT86O43790 486 aa20.95■□□□□ 0.95
ARHGEF1-221ENST00000600387 COBLO75128 1261 aa20.95■□□□□ 0.95
ARHGEF1-221ENST00000600387 IRX3P78415 501 aaPredicted RBP20.95■□□□□ 0.95
ARHGEF1-221ENST00000600387 TTC38Q5R3I4 469 aa20.95■□□□□ 0.95
ARHGEF1-221ENST00000600387 IQCEQ6IPM2 695 aa20.95■□□□□ 0.95
ARHGEF1-221ENST00000600387 PDXDC2PQ6P474 469 aa20.95■□□□□ 0.95
ARHGEF1-221ENST00000600387 STAMQ92783 540 aa20.95■□□□□ 0.95
ARHGEF1-221ENST00000600387 BLZF1Q9H2G9 400 aa20.95■□□□□ 0.95
ARHGEF1-221ENST00000600387 TTC26A0AVF1 554 aa20.95■□□□□ 0.94
ARHGEF1-221ENST00000600387 ZNF174Q15697 407 aa20.95■□□□□ 0.94
ARHGEF1-221ENST00000600387 RNF216Q9NWF9 866 aaPredicted RBP20.95■□□□□ 0.94
ARHGEF1-221ENST00000600387 SLC4A4Q9Y6R1 1079 aa20.95■□□□□ 0.94
ARHGEF1-221ENST00000600387 GGCXP38435 758 aa20.94■□□□□ 0.94
ARHGEF1-221ENST00000600387 HERVK_113P62684 666 aa20.94■□□□□ 0.94
ARHGEF1-221ENST00000600387 NKX1-1Q15270 411 aaPredicted RBP20.94■□□□□ 0.94
ARHGEF1-221ENST00000600387 MB21D1Q8N884 522 aa20.94■□□□□ 0.94
ARHGEF1-221ENST00000600387 FAM76AQ8TAV0 307 aa20.94■□□□□ 0.94
ARHGEF1-221ENST00000600387 JAKMIP2Q96AA8 810 aa20.94■□□□□ 0.94
ARHGEF1-221ENST00000600387 CAPN11Q9UMQ6 739 aa20.94■□□□□ 0.94
ARHGEF1-221ENST00000600387 ANO9A1A5B4 782 aa20.94■□□□□ 0.94
ARHGEF1-221ENST00000600387 PTGDRQ13258 359 aa20.94■□□□□ 0.94
ARHGEF1-221ENST00000600387 SEC23AQ15436 765 aa20.94■□□□□ 0.94
ARHGEF1-221ENST00000600387 CCNI2Q6ZMN8 369 aaPredicted RBP20.94■□□□□ 0.94
ARHGEF1-221ENST00000600387 TADA2BQ86TJ2 420 aa20.94■□□□□ 0.94
ARHGEF1-221ENST00000600387 ANKRD36CQ5JPF3 1778 aa20.94■□□□□ 0.94
ARHGEF1-221ENST00000600387 LGALS16A8MUM7 142 aa20.93■□□□□ 0.94
ARHGEF1-221ENST00000600387 PRKAB2O43741 272 aa20.93■□□□□ 0.94
ARHGEF1-221ENST00000600387 PARP1P09874 1014 aaKnown RBP20.93■□□□□ 0.94
ARHGEF1-221ENST00000600387 FGFR2P21802 821 aa20.93■□□□□ 0.94
ARHGEF1-221ENST00000600387 GIGYF2Q6Y7W6 1299 aaKnown RBP20.93■□□□□ 0.94
ARHGEF1-221ENST00000600387 KIAA1328Q86T90 577 aa20.93■□□□□ 0.94
ARHGEF1-221ENST00000600387 SYNE4Q8N205 404 aa20.93■□□□□ 0.94
ARHGEF1-221ENST00000600387 SELENOOQ9BVL4 669 aa20.93■□□□□ 0.94
ARHGEF1-221ENST00000600387 PLEKHA4Q9H4M7 779 aa20.93■□□□□ 0.94
ARHGEF1-221ENST00000600387 CCDC70Q6NSX1 233 aa20.93■□□□□ 0.94
ARHGEF1-221ENST00000600387 TNFRSF25Q93038 417 aa20.93■□□□□ 0.94
ARHGEF1-221ENST00000600387 RBM28Q9NW13 759 aaKnown RBP20.93■□□□□ 0.94
ARHGEF1-221ENST00000600387 TNKSO95271 1327 aa20.92■□□□□ 0.94
ARHGEF1-221ENST00000600387 MROH5Q6ZUA9 1318 aa20.92■□□□□ 0.94
ARHGEF1-221ENST00000600387 COL22A1Q8NFW1 1626 aaPredicted RBP20.92■□□□□ 0.94
ARHGEF1-221ENST00000600387 WNT7AO00755 349 aa20.92■□□□□ 0.94
ARHGEF1-221ENST00000600387 SRGAP2O75044 1071 aa20.92■□□□□ 0.94
ARHGEF1-221ENST00000600387 RPN1P04843 607 aaKnown RBP20.92■□□□□ 0.94
ARHGEF1-221ENST00000600387 EEF1GP26641 437 aaKnown RBP20.92■□□□□ 0.94
ARHGEF1-221ENST00000600387 CYLC1P35663 651 aaPredicted RBP20.92■□□□□ 0.94
ARHGEF1-221ENST00000600387 LCORLQ8N3X6 602 aa20.92■□□□□ 0.94
ARHGEF1-221ENST00000600387 CAGE1Q8TC20 777 aa20.92■□□□□ 0.94
ARHGEF1-221ENST00000600387 RUBCNQ92622 972 aa20.92■□□□□ 0.94
ARHGEF1-221ENST00000600387 ESR2Q92731 530 aa20.92■□□□□ 0.94
ARHGEF1-221ENST00000600387 CAPZA3Q96KX2 299 aa20.92■□□□□ 0.94
ARHGEF1-221ENST00000600387 PLCH1Q4KWH8 1693 aa20.92■□□□□ 0.94
ARHGEF1-221ENST00000600387 SLC5A1P13866 664 aa20.92■□□□□ 0.94
ARHGEF1-221ENST00000600387 GUCY2CP25092 1073 aa20.92■□□□□ 0.94
ARHGEF1-221ENST00000600387 PPARAQ07869 468 aa20.92■□□□□ 0.94
ARHGEF1-221ENST00000600387 FUT2Q10981 343 aa20.92■□□□□ 0.94
ARHGEF1-221ENST00000600387 MEA1Q16626 185 aa20.92■□□□□ 0.94
ARHGEF1-221ENST00000600387 WDR59Q6PJI9 974 aa20.92■□□□□ 0.94
ARHGEF1-221ENST00000600387 NLRP10Q86W26 655 aa20.92■□□□□ 0.94
ARHGEF1-221ENST00000600387 SUGP1Q8IWZ8 645 aaKnown RBP20.92■□□□□ 0.94
ARHGEF1-221ENST00000600387 MTRQ99707 1265 aa20.92■□□□□ 0.94
ARHGEF1-221ENST00000600387 GOLGA6CA6NDK9 693 aa20.91■□□□□ 0.94
ARHGEF1-221ENST00000600387 GOLGA6BA6NDN3 693 aa20.91■□□□□ 0.94
ARHGEF1-221ENST00000600387 AGPSO00116 658 aa20.91■□□□□ 0.94
ARHGEF1-221ENST00000600387 GOLGA6DP0CG33 693 aa20.91■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms