RNA–Protein interactions for RNA: ENST00000600343.5

NFKB1-212, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 2 BASIC

Gene NFKB1, Length 4,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-212ENST00000600343 KIFAP3Q92845 792 aa10.94□□□□□ -0.66
NFKB1-212ENST00000600343 JAKMIP2Q96AA8 810 aa10.94□□□□□ -0.66
NFKB1-212ENST00000600343 SYT15Q9BQS2 421 aa10.94□□□□□ -0.66
NFKB1-212ENST00000600343 TUBE1Q9UJT0 475 aa10.94□□□□□ -0.66
NFKB1-212ENST00000600343 LRRC7Q96NW7 1537 aa10.94□□□□□ -0.66
NFKB1-212ENST00000600343 HMGB1P1B2RPK0 211 aaPredicted RBP10.93□□□□□ -0.66
NFKB1-212ENST00000600343 TRAPPC3O43617 180 aa10.93□□□□□ -0.66
NFKB1-212ENST00000600343 CCT4P50991 539 aaKnown RBP10.93□□□□□ -0.66
NFKB1-212ENST00000600343 ATP8B2P98198 1209 aa10.93□□□□□ -0.66
NFKB1-212ENST00000600343 RNF220Q5VTB9 566 aa10.93□□□□□ -0.66
NFKB1-212ENST00000600343 WDR37Q9Y2I8 494 aa10.93□□□□□ -0.66
NFKB1-212ENST00000600343 NFE2L3Q9Y4A8 694 aa10.93□□□□□ -0.66
NFKB1-212ENST00000600343 ZNF233A6NK53 670 aa10.93□□□□□ -0.66
NFKB1-212ENST00000600343 CCT8L1PA6NM43 557 aa10.93□□□□□ -0.66
NFKB1-212ENST00000600343 ALADP13716 330 aa10.93□□□□□ -0.66
NFKB1-212ENST00000600343 PFKFB1P16118 471 aa10.93□□□□□ -0.66
NFKB1-212ENST00000600343 PSMC4P43686 418 aa10.93□□□□□ -0.66
NFKB1-212ENST00000600343 ITGB3BPQ13352 177 aaPredicted RBP10.93□□□□□ -0.66
NFKB1-212ENST00000600343 KBTBD12Q3ZCT8 623 aa10.93□□□□□ -0.66
NFKB1-212ENST00000600343 CCDC92Q53HC0 331 aaPredicted RBP10.93□□□□□ -0.66
NFKB1-212ENST00000600343 TMEM154Q6P9G4 183 aa10.93□□□□□ -0.66
NFKB1-212ENST00000600343 KCNG4Q8TDN1 519 aa10.93□□□□□ -0.66
NFKB1-212ENST00000600343 ANKRD27Q96NW4 1050 aa10.93□□□□□ -0.66
NFKB1-212ENST00000600343 TMEM98Q9Y2Y6 226 aa10.93□□□□□ -0.66
NFKB1-212ENST00000600343 F6X3S4 739 aa10.93□□□□□ -0.66
NFKB1-212ENST00000600343 GSTA1P08263 222 aa10.93□□□□□ -0.66
NFKB1-212ENST00000600343 FAM200BP0CF97 657 aa10.93□□□□□ -0.66
NFKB1-212ENST00000600343 IFI16Q16666 785 aaKnown RBP10.93□□□□□ -0.66
NFKB1-212ENST00000600343 SGSM1Q2NKQ1 1148 aa10.93□□□□□ -0.66
NFKB1-212ENST00000600343 MOV10L1Q9BXT6 1211 aaKnown RBP10.93□□□□□ -0.66
NFKB1-212ENST00000600343 ARHGEF10LQ9HCE6 1279 aa10.93□□□□□ -0.66
NFKB1-212ENST00000600343 ABCC6O95255 1503 aa10.93□□□□□ -0.66
NFKB1-212ENST00000600343 IQGAP3Q86VI3 1631 aa10.93□□□□□ -0.66
NFKB1-212ENST00000600343 PSMD14O00487 310 aa10.93□□□□□ -0.66
NFKB1-212ENST00000600343 CEP104O60308 925 aa10.93□□□□□ -0.66
NFKB1-212ENST00000600343 MFAP3LO75121 409 aa10.93□□□□□ -0.66
NFKB1-212ENST00000600343 HMOX1P09601 288 aa10.93□□□□□ -0.66
NFKB1-212ENST00000600343 PNOCQ13519 176 aa10.93□□□□□ -0.66
NFKB1-212ENST00000600343 EZH2Q15910 746 aaKnown RBP10.93□□□□□ -0.66
NFKB1-212ENST00000600343 HDAC7Q8WUI4 952 aa10.93□□□□□ -0.66
NFKB1-212ENST00000600343 PRCCQ92733 491 aaPredicted RBP10.93□□□□□ -0.66
NFKB1-212ENST00000600343 SLF1Q9BQI6 1058 aa10.93□□□□□ -0.66
NFKB1-212ENST00000600343 ALDH8A1Q9H2A2 487 aaPredicted RBP10.93□□□□□ -0.66
NFKB1-212ENST00000600343 DMGDHQ9UI17 866 aaKnown RBP10.93□□□□□ -0.66
NFKB1-212ENST00000600343 TMCO1Q9UM00 188 aa10.93□□□□□ -0.66
NFKB1-212ENST00000600343 RAPGEF6Q8TEU7 1601 aa10.92□□□□□ -0.66
NFKB1-212ENST00000600343 GOLGA6L10A0A0M3HER8 536 aa10.92□□□□□ -0.66
NFKB1-212ENST00000600343 PENKP01210 267 aaPredicted RBP10.92□□□□□ -0.66
NFKB1-212ENST00000600343 PAK2Q13177 524 aa10.92□□□□□ -0.66
NFKB1-212ENST00000600343 SEPT2Q15019 361 aa10.92□□□□□ -0.66
NFKB1-212ENST00000600343 MEX3CQ5U5Q3 659 aaKnown RBP10.92□□□□□ -0.66
NFKB1-212ENST00000600343 LINC00301Q8NCQ3 95 aa10.92□□□□□ -0.66
NFKB1-212ENST00000600343 CAVIN3Q969G5 261 aa10.92□□□□□ -0.66
NFKB1-212ENST00000600343 DMAP1Q9NPF5 467 aaPredicted RBP10.92□□□□□ -0.66
NFKB1-212ENST00000600343 C5orf60A6NFR6 353 aa10.92□□□□□ -0.66
NFKB1-212ENST00000600343 SPTLC2O15270 562 aa10.92□□□□□ -0.66
NFKB1-212ENST00000600343 TMED1Q13445 227 aa10.92□□□□□ -0.66
NFKB1-212ENST00000600343 TMTC1Q8IUR5 882 aa10.92□□□□□ -0.66
NFKB1-212ENST00000600343 RUBCNQ92622 972 aa10.92□□□□□ -0.66
NFKB1-212ENST00000600343 RPS6KC1Q96S38 1066 aa10.92□□□□□ -0.66
NFKB1-212ENST00000600343 LRRC1Q9BTT6 524 aa10.92□□□□□ -0.66
NFKB1-212ENST00000600343 VCXQ9H320 206 aa10.92□□□□□ -0.66
NFKB1-212ENST00000600343 TRIM10Q9UDY6 481 aa10.92□□□□□ -0.66
NFKB1-212ENST00000600343 PAIP2BQ9ULR5 123 aaKnown RBP10.92□□□□□ -0.66
NFKB1-212ENST00000600343 FLOT1O75955 427 aa10.92□□□□□ -0.66
NFKB1-212ENST00000600343 SP100P23497 879 aaPredicted RBP10.92□□□□□ -0.66
NFKB1-212ENST00000600343 MRPS25P82663 173 aaKnown RBP10.92□□□□□ -0.66
NFKB1-212ENST00000600343 SLC7A5Q01650 507 aa10.92□□□□□ -0.66
NFKB1-212ENST00000600343 NR1I3Q14994 352 aa10.92□□□□□ -0.66
NFKB1-212ENST00000600343 PAPD7Q5XG87 772 aaKnown RBP10.92□□□□□ -0.66
NFKB1-212ENST00000600343 OLFML1Q6UWY5 402 aa10.92□□□□□ -0.66
NFKB1-212ENST00000600343 CEP128Q6ZU80 1094 aa10.92□□□□□ -0.66
NFKB1-212ENST00000600343 CNGA4Q8IV77 575 aa10.92□□□□□ -0.66
NFKB1-212ENST00000600343 SLC35B4Q969S0 331 aa10.92□□□□□ -0.66
NFKB1-212ENST00000600343 IWS1Q96ST2 819 aa10.92□□□□□ -0.66
NFKB1-212ENST00000600343 GMEB1Q9Y692 573 aa10.92□□□□□ -0.66
NFKB1-212ENST00000600343 ZNF185O15231 689 aa10.91□□□□□ -0.66
NFKB1-212ENST00000600343 TMCC1O94876 653 aa10.91□□□□□ -0.66
NFKB1-212ENST00000600343 VCAM1P19320 739 aa10.91□□□□□ -0.66
NFKB1-212ENST00000600343 RFC5P40937 340 aa10.91□□□□□ -0.66
NFKB1-212ENST00000600343 SYKP43405 635 aa10.91□□□□□ -0.66
NFKB1-212ENST00000600343 PDE4BQ07343 736 aa10.91□□□□□ -0.66
NFKB1-212ENST00000600343 CBX3Q13185 183 aa10.91□□□□□ -0.66
NFKB1-212ENST00000600343 SEPT14Q6ZU15 432 aa10.91□□□□□ -0.66
NFKB1-212ENST00000600343 TRAPPC9Q96Q05 1148 aa10.91□□□□□ -0.66
NFKB1-212ENST00000600343 DLGAP2Q9P1A6 1054 aa10.91□□□□□ -0.66
NFKB1-212ENST00000600343 WWC3Q9ULE0 1092 aa10.91□□□□□ -0.66
NFKB1-212ENST00000600343 SLC12A4Q9UP95 1085 aa10.91□□□□□ -0.66
NFKB1-212ENST00000600343 CLIC4Q9Y696 253 aa10.91□□□□□ -0.66
NFKB1-212ENST00000600343 TMEM221A6NGB7 291 aa10.91□□□□□ -0.66
NFKB1-212ENST00000600343 PDE2AO00408 941 aaPredicted RBP10.91□□□□□ -0.66
NFKB1-212ENST00000600343 CASP14P31944 242 aa10.91□□□□□ -0.66
NFKB1-212ENST00000600343 APBB1IPQ7Z5R6 666 aaPredicted RBP10.91□□□□□ -0.66
NFKB1-212ENST00000600343 ANKS4BQ8N8V4 417 aa10.91□□□□□ -0.66
NFKB1-212ENST00000600343 CCDC197Q8NCU1 140 aa10.91□□□□□ -0.66
NFKB1-212ENST00000600343 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.91□□□□□ -0.66
NFKB1-212ENST00000600343 ZNHIT6Q9NWK9 470 aaKnown RBP10.91□□□□□ -0.66
NFKB1-212ENST00000600343 TEX33O43247 280 aa10.91□□□□□ -0.66
NFKB1-212ENST00000600343 NQO1P15559 274 aaKnown RBP10.91□□□□□ -0.66
NFKB1-212ENST00000600343 ALDH5A1P51649 535 aaPredicted RBP10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms