RNA–Protein interactions for RNA: ENST00000599343.5

SCN8A-208, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,976 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-208ENST00000599343 ZNF827Q17R98 1081 aa13.02□□□□□ -0.32
SCN8A-208ENST00000599343 NUCKS1Q9H1E3 243 aaKnown RBP13.02□□□□□ -0.32
SCN8A-208ENST00000599343 RIMS2Q9UQ26 1411 aa13.02□□□□□ -0.32
SCN8A-208ENST00000599343 WHAMMQ8TF30 809 aa13.02□□□□□ -0.32
SCN8A-208ENST00000599343 MED10Q9BTT4 135 aa13.02□□□□□ -0.32
SCN8A-208ENST00000599343 VCX3AQ9NNX9 186 aa13.02□□□□□ -0.32
SCN8A-208ENST00000599343 RIC8AQ9NPQ8 531 aa13.02□□□□□ -0.32
SCN8A-208ENST00000599343 SMCO2A6NFE2 343 aa13.02□□□□□ -0.33
SCN8A-208ENST00000599343 PHBP35232 272 aa13.02□□□□□ -0.33
SCN8A-208ENST00000599343 TECP42680 631 aa13.02□□□□□ -0.33
SCN8A-208ENST00000599343 DNM2P50570 870 aa13.02□□□□□ -0.33
SCN8A-208ENST00000599343 COG7P83436 770 aa13.02□□□□□ -0.33
SCN8A-208ENST00000599343 BIRC2Q13490 618 aa13.02□□□□□ -0.33
SCN8A-208ENST00000599343 PHLDB3Q6NSJ2 640 aa13.02□□□□□ -0.33
SCN8A-208ENST00000599343 ZNF790Q6PG37 636 aa13.02□□□□□ -0.33
SCN8A-208ENST00000599343 USP19O94966 1318 aa13.02□□□□□ -0.33
SCN8A-208ENST00000599343 SH3TC1Q8TE82 1336 aa13.02□□□□□ -0.33
SCN8A-208ENST00000599343 BRDTQ58F21 947 aaPredicted RBP13.02□□□□□ -0.33
SCN8A-208ENST00000599343 REXO1Q8N1G1 1221 aaKnown RBP13.02□□□□□ -0.33
SCN8A-208ENST00000599343 BCAP29Q9UHQ4 241 aa13.02□□□□□ -0.33
SCN8A-208ENST00000599343 THAP12O43422 761 aa13.01□□□□□ -0.33
SCN8A-208ENST00000599343 HIP1RO75146 1068 aa13.01□□□□□ -0.33
SCN8A-208ENST00000599343 XRCC5P13010 732 aaKnown RBP13.01□□□□□ -0.33
SCN8A-208ENST00000599343 YARSP54577 528 aaKnown RBP13.01□□□□□ -0.33
SCN8A-208ENST00000599343 OR8K1Q8NGG5 319 aa13.01□□□□□ -0.33
SCN8A-208ENST00000599343 STAM2O75886 525 aa13.01□□□□□ -0.33
SCN8A-208ENST00000599343 GNA14O95837 355 aa13.01□□□□□ -0.33
SCN8A-208ENST00000599343 GCP02774 474 aa13.01□□□□□ -0.33
SCN8A-208ENST00000599343 CFAP61Q8NHU2 1237 aa13.01□□□□□ -0.33
SCN8A-208ENST00000599343 CARD14Q9BXL6 1004 aa13.01□□□□□ -0.33
SCN8A-208ENST00000599343 IVNS1ABPQ9Y6Y0 642 aa13.01□□□□□ -0.33
SCN8A-208ENST00000599343 CLTAP09496 248 aa13.01□□□□□ -0.33
SCN8A-208ENST00000599343 ITKQ08881 620 aa13.01□□□□□ -0.33
SCN8A-208ENST00000599343 EDC3Q96F86 508 aaKnown RBP13.01□□□□□ -0.33
SCN8A-208ENST00000599343 KAZNQ674X7 775 aa13.01□□□□□ -0.33
SCN8A-208ENST00000599343 CCDC51Q96ER9 411 aa13.01□□□□□ -0.33
SCN8A-208ENST00000599343 A0A1W2PP64 1363 aa13.01□□□□□ -0.33
SCN8A-208ENST00000599343 SPDYE16A6NNV3 312 aaPredicted RBP13.01□□□□□ -0.33
SCN8A-208ENST00000599343 SPDYE2Q495Y8 402 aa13.01□□□□□ -0.33
SCN8A-208ENST00000599343 STAG1Q8WVM7 1258 aa13.01□□□□□ -0.33
SCN8A-208ENST00000599343 LPIN2Q92539 896 aa13.01□□□□□ -0.33
SCN8A-208ENST00000599343 TSPYL2Q9H2G4 693 aaPredicted RBP13.01□□□□□ -0.33
SCN8A-208ENST00000599343 HOMER3Q9NSC5 361 aa13.01□□□□□ -0.33
SCN8A-208ENST00000599343 KIAA1468Q9P260 1216 aa13.01□□□□□ -0.33
SCN8A-208ENST00000599343 ANKFY1Q9P2R3 1169 aa13.01□□□□□ -0.33
SCN8A-208ENST00000599343 FRMPD2Q68DX3 1309 aaPredicted RBP13.01□□□□□ -0.33
SCN8A-208ENST00000599343 IBTKQ9P2D0 1353 aaPredicted RBP13.01□□□□□ -0.33
SCN8A-208ENST00000599343 COBLO75128 1261 aa13□□□□□ -0.33
SCN8A-208ENST00000599343 A1BGP04217 495 aa13□□□□□ -0.33
SCN8A-208ENST00000599343 NAA35Q5VZE5 725 aa13□□□□□ -0.33
SCN8A-208ENST00000599343 MIER3Q7Z3K6 550 aa13□□□□□ -0.33
SCN8A-208ENST00000599343 TRIM50Q86XT4 487 aa13□□□□□ -0.33
SCN8A-208ENST00000599343 MYOCDQ8IZQ8 938 aa13□□□□□ -0.33
SCN8A-208ENST00000599343 BCAS4Q8TDM0 211 aa13□□□□□ -0.33
SCN8A-208ENST00000599343 GRK7Q8WTQ7 553 aa13□□□□□ -0.33
SCN8A-208ENST00000599343 RPGRIP1Q96KN7 1286 aa13□□□□□ -0.33
SCN8A-208ENST00000599343 LZTS2Q9BRK4 669 aa13□□□□□ -0.33
SCN8A-208ENST00000599343 ZFYVE9O95405 1425 aa13□□□□□ -0.33
SCN8A-208ENST00000599343 SPECC1L-ADORA2AF8WAN1 911 aa13□□□□□ -0.33
SCN8A-208ENST00000599343 MGEA5O60502 916 aa13□□□□□ -0.33
SCN8A-208ENST00000599343 GAS7O60861 476 aa13□□□□□ -0.33
SCN8A-208ENST00000599343 POLR2FP61218 127 aaKnown RBP13□□□□□ -0.33
SCN8A-208ENST00000599343 MAP3K21Q5TCX8 1036 aa13□□□□□ -0.33
SCN8A-208ENST00000599343 UBAP1LF5GYI3 381 aa13□□□□□ -0.33
SCN8A-208ENST00000599343 SERPINB6P35237 376 aa13□□□□□ -0.33
SCN8A-208ENST00000599343 PPP2R5AQ15172 486 aa13□□□□□ -0.33
SCN8A-208ENST00000599343 DBN1Q16643 649 aa13□□□□□ -0.33
SCN8A-208ENST00000599343 MYSM1Q5VVJ2 828 aa13□□□□□ -0.33
SCN8A-208ENST00000599343 HVCN1Q96D96 273 aa13□□□□□ -0.33
SCN8A-208ENST00000599343 PPME1Q9Y570 386 aa13□□□□□ -0.33
SCN8A-208ENST00000599343 PRAG1Q86YV5 1406 aa13□□□□□ -0.33
SCN8A-208ENST00000599343 SBNO1A3KN83 1393 aa13□□□□□ -0.33
SCN8A-208ENST00000599343 GSTA1P08263 222 aa13□□□□□ -0.33
SCN8A-208ENST00000599343 GSTA2P09210 222 aa13□□□□□ -0.33
SCN8A-208ENST00000599343 PEX19P40855 299 aa13□□□□□ -0.33
SCN8A-208ENST00000599343 PPARAQ07869 468 aa13□□□□□ -0.33
SCN8A-208ENST00000599343 PARP10Q53GL7 1025 aa13□□□□□ -0.33
SCN8A-208ENST00000599343 METTL13Q8N6R0 699 aa13□□□□□ -0.33
SCN8A-208ENST00000599343 DEPTORQ8TB45 409 aa13□□□□□ -0.33
SCN8A-208ENST00000599343 ZNF215Q9UL58 517 aaPredicted RBP13□□□□□ -0.33
SCN8A-208ENST00000599343 IFRD2Q12894 506 aaPredicted RBP13□□□□□ -0.33
SCN8A-208ENST00000599343 CCDC93Q567U6 631 aa13□□□□□ -0.33
SCN8A-208ENST00000599343 ADALQ6DHV7 355 aa13□□□□□ -0.33
SCN8A-208ENST00000599343 JADE1Q6IE81 842 aa13□□□□□ -0.33
SCN8A-208ENST00000599343 USH1CQ9Y6N9 552 aa13□□□□□ -0.33
SCN8A-208ENST00000599343 P4HA1P13674 534 aa12.99□□□□□ -0.33
SCN8A-208ENST00000599343 KMT5BQ4FZB7 885 aa12.99□□□□□ -0.33
SCN8A-208ENST00000599343 DCLK2Q8N568 766 aa12.99□□□□□ -0.33
SCN8A-208ENST00000599343 NT5C3AQ9H0P0 336 aa12.99□□□□□ -0.33
SCN8A-208ENST00000599343 PANK4Q9NVE7 773 aa12.99□□□□□ -0.33
SCN8A-208ENST00000599343 MAP3K19Q56UN5 1328 aa12.99□□□□□ -0.33
SCN8A-208ENST00000599343 KAT6BQ8WYB5 2073 aa12.99□□□□□ -0.33
SCN8A-208ENST00000599343 IL1RL1Q01638 556 aa12.99□□□□□ -0.33
SCN8A-208ENST00000599343 KCTD16Q68DU8 428 aa12.99□□□□□ -0.33
SCN8A-208ENST00000599343 PDZD8Q8NEN9 1154 aa12.99□□□□□ -0.33
SCN8A-208ENST00000599343 LGR6Q9HBX8 967 aa12.99□□□□□ -0.33
SCN8A-208ENST00000599343 KDRP35968 1356 aa12.99□□□□□ -0.33
SCN8A-208ENST00000599343 MAST3O60307 1309 aa12.99□□□□□ -0.33
SCN8A-208ENST00000599343 ABL1P00519 1130 aa12.99□□□□□ -0.33
SCN8A-208ENST00000599343 KRT3P12035 628 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms