RNA–Protein interactions for RNA: ENST00000596726.3

PNKP-209, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 637 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-209ENST00000596726 RAD21O60216 631 aa24.95■■□□□ 1.58
PNKP-209ENST00000596726 ADCY3O60266 1144 aa24.95■■□□□ 1.58
PNKP-209ENST00000596726 NMT2O60551 498 aa24.95■■□□□ 1.58
PNKP-209ENST00000596726 NEFLP07196 543 aa24.95■■□□□ 1.58
PNKP-209ENST00000596726 GPR142Q7Z601 462 aa24.95■■□□□ 1.58
PNKP-209ENST00000596726 LRRC47Q8N1G4 583 aaKnown RBP24.95■■□□□ 1.58
PNKP-209ENST00000596726 NUP88Q99567 741 aaPredicted RBP24.95■■□□□ 1.58
PNKP-209ENST00000596726 RNF41Q9H4P4 317 aaPredicted RBP24.95■■□□□ 1.58
PNKP-209ENST00000596726 TCP11L1Q9NUJ3 509 aa24.95■■□□□ 1.58
PNKP-209ENST00000596726 PPP1R9AQ9ULJ8 1098 aa24.95■■□□□ 1.58
PNKP-209ENST00000596726 RRP12Q5JTH9 1297 aaKnown RBP24.94■■□□□ 1.58
PNKP-209ENST00000596726 PLEKHH3Q7Z736 793 aa24.94■■□□□ 1.58
PNKP-209ENST00000596726 USP6NLQ92738 828 aa24.94■■□□□ 1.58
PNKP-209ENST00000596726 TOMM22Q9NS69 142 aa24.94■■□□□ 1.58
PNKP-209ENST00000596726 CTNNA3Q9UI47 895 aa24.94■■□□□ 1.58
PNKP-209ENST00000596726 SGSM2O43147 1006 aa24.93■■□□□ 1.58
PNKP-209ENST00000596726 MORN1Q5T089 497 aa24.93■■□□□ 1.58
PNKP-209ENST00000596726 CCAR1Q8IX12 1150 aaKnown RBP24.93■■□□□ 1.58
PNKP-209ENST00000596726 NKX2-3Q8TAU0 364 aa24.93■■□□□ 1.58
PNKP-209ENST00000596726 SOCS4Q8WXH5 440 aa24.93■■□□□ 1.58
PNKP-209ENST00000596726 MOV10L1Q9BXT6 1211 aaKnown RBP24.93■■□□□ 1.58
PNKP-209ENST00000596726 SPATC1LQ9H0A9 340 aa24.93■■□□□ 1.58
PNKP-209ENST00000596726 POTEFA5A3E0 1075 aa24.92■■□□□ 1.58
PNKP-209ENST00000596726 ELNP15502 786 aa24.92■■□□□ 1.58
PNKP-209ENST00000596726 NT5C2P49902 561 aa24.92■■□□□ 1.58
PNKP-209ENST00000596726 IMMTQ16891 758 aaKnown RBP24.92■■□□□ 1.58
PNKP-209ENST00000596726 SLFN13Q68D06 897 aa24.92■■□□□ 1.58
PNKP-209ENST00000596726 NUDT12Q9BQG2 462 aa24.92■■□□□ 1.58
PNKP-209ENST00000596726 STX8Q9UNK0 236 aa24.92■■□□□ 1.58
PNKP-209ENST00000596726 BRCA2P51587 3418 aa24.92■■□□□ 1.58
PNKP-209ENST00000596726 NEDD4P46934 1319 aa24.91■■□□□ 1.58
PNKP-209ENST00000596726 PTH1RQ03431 593 aa24.91■■□□□ 1.58
PNKP-209ENST00000596726 TMEM132BQ14DG7 1078 aa24.91■■□□□ 1.58
PNKP-209ENST00000596726 BMP2KLQ5H9B9 411 aa24.91■■□□□ 1.58
PNKP-209ENST00000596726 SHCBP1Q8NEM2 672 aa24.91■■□□□ 1.58
PNKP-209ENST00000596726 REPS2Q8NFH8 660 aa24.91■■□□□ 1.58
PNKP-209ENST00000596726 VWA5AO00534 786 aa24.9■■□□□ 1.58
PNKP-209ENST00000596726 XRCC5P13010 732 aaKnown RBP24.9■■□□□ 1.58
PNKP-209ENST00000596726 PTPREP23469 700 aa24.9■■□□□ 1.58
PNKP-209ENST00000596726 MTFR1Q15390 333 aa24.9■■□□□ 1.58
PNKP-209ENST00000596726 SAMD1Q6SPF0 538 aaPredicted RBP24.9■■□□□ 1.58
PNKP-209ENST00000596726 GMCL1Q96IK5 515 aa24.9■■□□□ 1.58
PNKP-209ENST00000596726 SLF1Q9BQI6 1058 aa24.9■■□□□ 1.58
PNKP-209ENST00000596726 TMEM106CQ9BVX2 250 aa24.9■■□□□ 1.58
PNKP-209ENST00000596726 ZNFX1Q9P2E3 1918 aaKnown RBP24.89■■□□□ 1.58
PNKP-209ENST00000596726 CENPBP07199 599 aaPredicted RBP24.89■■□□□ 1.58
PNKP-209ENST00000596726 BMP3P12645 472 aa24.89■■□□□ 1.58
PNKP-209ENST00000596726 CYP2B6P20813 491 aa24.89■■□□□ 1.58
PNKP-209ENST00000596726 UBXN2AP68543 259 aa24.89■■□□□ 1.58
PNKP-209ENST00000596726 PRPF38AQ8NAV1 312 aaKnown RBP24.89■■□□□ 1.58
PNKP-209ENST00000596726 ESR2Q92731 530 aa24.89■■□□□ 1.58
PNKP-209ENST00000596726 BIN2Q9UBW5 565 aaPredicted RBP24.89■■□□□ 1.58
PNKP-209ENST00000596726 FEM1BQ9UK73 627 aa24.89■■□□□ 1.58
PNKP-209ENST00000596726 SLC15A5A6NIM6 579 aa24.88■■□□□ 1.57
PNKP-209ENST00000596726 MYCP01106 439 aaPredicted RBP24.88■■□□□ 1.57
PNKP-209ENST00000596726 INHAP05111 366 aa24.88■■□□□ 1.57
PNKP-209ENST00000596726 GRB14Q14449 540 aa24.88■■□□□ 1.57
PNKP-209ENST00000596726 RCSD1Q6JBY9 416 aa24.88■■□□□ 1.57
PNKP-209ENST00000596726 TTC14Q96N46 770 aa24.88■■□□□ 1.57
PNKP-209ENST00000596726 ZNF214Q9UL59 606 aaPredicted RBP24.88■■□□□ 1.57
PNKP-209ENST00000596726 ZNF236Q9UL36 1845 aa24.88■■□□□ 1.57
PNKP-209ENST00000596726 TOP1P11387 765 aaKnown RBP24.87■■□□□ 1.57
PNKP-209ENST00000596726 CCL5P13501 91 aa24.87■■□□□ 1.57
PNKP-209ENST00000596726 ERCC3P19447 782 aa24.87■■□□□ 1.57
PNKP-209ENST00000596726 MAP2K5Q13163 448 aa24.87■■□□□ 1.57
PNKP-209ENST00000596726 WDR78Q5VTH9 848 aa24.87■■□□□ 1.57
PNKP-209ENST00000596726 TMEM47Q9BQJ4 181 aa24.87■■□□□ 1.57
PNKP-209ENST00000596726 MROH8Q9H579 483 aa24.87■■□□□ 1.57
PNKP-209ENST00000596726 CWC22Q9HCG8 908 aaKnown RBP24.87■■□□□ 1.57
PNKP-209ENST00000596726 TNRC18O15417 2968 aaPredicted RBP24.86■■□□□ 1.57
PNKP-209ENST00000596726 SLC25A27O95847 323 aa24.86■■□□□ 1.57
PNKP-209ENST00000596726 HMGCRP04035 888 aa24.86■■□□□ 1.57
PNKP-209ENST00000596726 MCCP23508 829 aa24.86■■□□□ 1.57
PNKP-209ENST00000596726 RGS2P41220 211 aa24.86■■□□□ 1.57
PNKP-209ENST00000596726 MLLT1Q03111 559 aaPredicted RBP24.86■■□□□ 1.57
PNKP-209ENST00000596726 PLS1Q14651 629 aa24.86■■□□□ 1.57
PNKP-209ENST00000596726 RIOX2Q8IUF8 465 aa24.86■■□□□ 1.57
PNKP-209ENST00000596726 TRIB2Q92519 343 aa24.86■■□□□ 1.57
PNKP-209ENST00000596726 MAP4K1Q92918 833 aa24.86■■□□□ 1.57
PNKP-209ENST00000596726 IVNS1ABPQ9Y6Y0 642 aa24.86■■□□□ 1.57
PNKP-209ENST00000596726 U3KPZ7 1027 aaPredicted RBP24.86■■□□□ 1.57
PNKP-209ENST00000596726 B4E1Z4 1266 aa24.85■■□□□ 1.57
PNKP-209ENST00000596726 STRNO43815 780 aa24.85■■□□□ 1.57
PNKP-209ENST00000596726 PLA2G6O60733 806 aa24.85■■□□□ 1.57
PNKP-209ENST00000596726 HOXC6P09630 235 aa24.85■■□□□ 1.57
PNKP-209ENST00000596726 EN2P19622 333 aaPredicted RBP24.85■■□□□ 1.57
PNKP-209ENST00000596726 STAT3P40763 770 aa24.85■■□□□ 1.57
PNKP-209ENST00000596726 SLC1A4P43007 532 aa24.85■■□□□ 1.57
PNKP-209ENST00000596726 ERICH6BQ5W0A0 696 aa24.85■■□□□ 1.57
PNKP-209ENST00000596726 TRMT44Q8IYL2 757 aaKnown RBP24.85■■□□□ 1.57
PNKP-209ENST00000596726 UNC93B1Q9H1C4 597 aa24.85■■□□□ 1.57
PNKP-209ENST00000596726 TMEM232C9JQI7 657 aa24.84■■□□□ 1.57
PNKP-209ENST00000596726 ATP2A1O14983 1001 aa24.84■■□□□ 1.57
PNKP-209ENST00000596726 KDM4AO75164 1064 aa24.84■■□□□ 1.57
PNKP-209ENST00000596726 FAM160B2Q86V87 743 aa24.84■■□□□ 1.57
PNKP-209ENST00000596726 NCAPG2Q86XI2 1143 aa24.84■■□□□ 1.57
PNKP-209ENST00000596726 DCAF4Q8WV16 495 aa24.84■■□□□ 1.57
PNKP-209ENST00000596726 KIFC2Q96AC6 838 aa24.84■■□□□ 1.57
PNKP-209ENST00000596726 APBA2Q99767 749 aa24.84■■□□□ 1.57
PNKP-209ENST00000596726 ESYT1Q9BSJ8 1104 aa24.84■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms