RNA–Protein interactions for RNA: ENST00000595803.5

SHKBP1-209, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-209ENST00000595803 GH2P01242 217 aa15.19■□□□□ 0.02
SHKBP1-209ENST00000595803 CDC27P30260 824 aa15.19■□□□□ 0.02
SHKBP1-209ENST00000595803 KIF5BP33176 963 aa15.19■□□□□ 0.02
SHKBP1-209ENST00000595803 DDIT3P35638 169 aa15.19■□□□□ 0.02
SHKBP1-209ENST00000595803 CAP2P40123 477 aa15.19■□□□□ 0.02
SHKBP1-209ENST00000595803 TROAPQ12815 778 aa15.19■□□□□ 0.02
SHKBP1-209ENST00000595803 MKRN3Q13064 507 aaKnown RBP15.19■□□□□ 0.02
SHKBP1-209ENST00000595803 RRP1BQ14684 758 aaKnown RBP15.19■□□□□ 0.02
SHKBP1-209ENST00000595803 SEPT2Q15019 361 aa15.19■□□□□ 0.02
SHKBP1-209ENST00000595803 RAB3GAP1Q15042 981 aa15.19■□□□□ 0.02
SHKBP1-209ENST00000595803 PRAMEF18Q5VWM3 479 aa15.19■□□□□ 0.02
SHKBP1-209ENST00000595803 SMARCC2Q8TAQ2 1214 aa15.19■□□□□ 0.02
SHKBP1-209ENST00000595803 MAP3K14Q99558 947 aa15.19■□□□□ 0.02
SHKBP1-209ENST00000595803 FAM217BQ9NTX9 383 aaPredicted RBP15.19■□□□□ 0.02
SHKBP1-209ENST00000595803 NYAP2Q9P242 653 aa15.19■□□□□ 0.02
SHKBP1-209ENST00000595803 MTMR7Q9Y216 660 aa15.19■□□□□ 0.02
SHKBP1-209ENST00000595803 SIPA1L1O43166 1804 aa15.18■□□□□ 0.02
SHKBP1-209ENST00000595803 PTPDC1A2A3K4 754 aa15.18■□□□□ 0.02
SHKBP1-209ENST00000595803 DTNBO60941 627 aa15.18■□□□□ 0.02
SHKBP1-209ENST00000595803 EEF2P13639 858 aaKnown RBP15.18■□□□□ 0.02
SHKBP1-209ENST00000595803 PDIA4P13667 645 aaKnown RBP15.18■□□□□ 0.02
SHKBP1-209ENST00000595803 PDCP20941 246 aa15.18■□□□□ 0.02
SHKBP1-209ENST00000595803 GNAQP50148 359 aa15.18■□□□□ 0.02
SHKBP1-209ENST00000595803 SSRP1Q08945 709 aaKnown RBP15.18■□□□□ 0.02
SHKBP1-209ENST00000595803 SREBF2Q12772 1141 aa15.18■□□□□ 0.02
SHKBP1-209ENST00000595803 LARP1BQ659C4 914 aaKnown RBP15.18■□□□□ 0.02
SHKBP1-209ENST00000595803 ARMC5Q96C12 935 aa15.18■□□□□ 0.02
SHKBP1-209ENST00000595803 GINM1Q9NU53 330 aa15.18■□□□□ 0.02
SHKBP1-209ENST00000595803 NID2Q14112 1375 aa15.17■□□□□ 0.02
SHKBP1-209ENST00000595803 PHF20L1A8MW92 1017 aa15.17■□□□□ 0.02
SHKBP1-209ENST00000595803 UBE2Q2LH0YL09 131 aa15.17■□□□□ 0.02
SHKBP1-209ENST00000595803 GUCY1A2P33402 732 aa15.17■□□□□ 0.02
SHKBP1-209ENST00000595803 MNX1P50219 401 aaPredicted RBP15.17■□□□□ 0.02
SHKBP1-209ENST00000595803 AKAP17AQ02040 695 aaKnown RBP15.17■□□□□ 0.02
SHKBP1-209ENST00000595803 ICA1Q05084 483 aa15.17■□□□□ 0.02
SHKBP1-209ENST00000595803 GRM4Q14833 912 aa15.17■□□□□ 0.02
SHKBP1-209ENST00000595803 TRIM22Q8IYM9 498 aa15.17■□□□□ 0.02
SHKBP1-209ENST00000595803 MKL1Q969V6 931 aa15.17■□□□□ 0.02
SHKBP1-209ENST00000595803 ARHGEF10LQ9HCE6 1279 aa15.17■□□□□ 0.02
SHKBP1-209ENST00000595803 RBM27Q9P2N5 1060 aaKnown RBP15.17■□□□□ 0.02
SHKBP1-209ENST00000595803 ORC3Q9UBD5 711 aaPredicted RBP15.17■□□□□ 0.02
SHKBP1-209ENST00000595803 CTNND1O60716 968 aaKnown RBP15.16■□□□□ 0.02
SHKBP1-209ENST00000595803 ASNSP08243 561 aa15.16■□□□□ 0.02
SHKBP1-209ENST00000595803 PARP1P09874 1014 aaKnown RBP15.16■□□□□ 0.02
SHKBP1-209ENST00000595803 IFNAR1P17181 557 aa15.16■□□□□ 0.02
SHKBP1-209ENST00000595803 JAG1P78504 1218 aa15.16■□□□□ 0.02
SHKBP1-209ENST00000595803 LRRC47Q8N1G4 583 aaKnown RBP15.16■□□□□ 0.02
SHKBP1-209ENST00000595803 LZTS2Q9BRK4 669 aa15.16■□□□□ 0.02
SHKBP1-209ENST00000595803 SLC26A6Q9BXS9 759 aa15.16■□□□□ 0.02
SHKBP1-209ENST00000595803 ZBTB21Q9ULJ3 1066 aa15.16■□□□□ 0.02
SHKBP1-209ENST00000595803 RAD21O60216 631 aa15.15■□□□□ 0.02
SHKBP1-209ENST00000595803 PPFIA3O75145 1194 aa15.15■□□□□ 0.02
SHKBP1-209ENST00000595803 FMNL1O95466 1100 aaPredicted RBP15.15■□□□□ 0.02
SHKBP1-209ENST00000595803 SYT1P21579 422 aa15.15■□□□□ 0.02
SHKBP1-209ENST00000595803 NF2P35240 595 aa15.15■□□□□ 0.02
SHKBP1-209ENST00000595803 NTRK3Q16288 839 aa15.15■□□□□ 0.02
SHKBP1-209ENST00000595803 SHROOM1Q2M3G4 852 aaPredicted RBP15.15■□□□□ 0.02
SHKBP1-209ENST00000595803 CLEC10AQ8IUN9 316 aa15.15■□□□□ 0.02
SHKBP1-209ENST00000595803 CCDC82Q8N4S0 544 aa15.15■□□□□ 0.02
SHKBP1-209ENST00000595803 WASF1Q92558 559 aa15.15■□□□□ 0.02
SHKBP1-209ENST00000595803 ZNF112Q9UJU3 913 aa15.15■□□□□ 0.02
SHKBP1-209ENST00000595803 PTPN22Q9Y2R2 807 aa15.15■□□□□ 0.02
SHKBP1-209ENST00000595803 PALM3A6NDB9 673 aaPredicted RBP15.14■□□□□ 0.01
SHKBP1-209ENST00000595803 H3BQV1 296 aa15.14■□□□□ 0.01
SHKBP1-209ENST00000595803 STX6O43752 255 aa15.14■□□□□ 0.01
SHKBP1-209ENST00000595803 PPP1R12BO60237 982 aaPredicted RBP15.14■□□□□ 0.01
SHKBP1-209ENST00000595803 FDPSP14324 419 aaKnown RBP15.14■□□□□ 0.01
SHKBP1-209ENST00000595803 SLFN13Q68D06 897 aa15.14■□□□□ 0.01
SHKBP1-209ENST00000595803 TMTC3Q6ZXV5 915 aa15.14■□□□□ 0.01
SHKBP1-209ENST00000595803 SIAH1Q8IUQ4 282 aa15.14■□□□□ 0.01
SHKBP1-209ENST00000595803 CMTR1Q8N1G2 835 aaKnown RBP15.14■□□□□ 0.01
SHKBP1-209ENST00000595803 PHKBQ93100 1093 aa15.14■□□□□ 0.01
SHKBP1-209ENST00000595803 LAMA3Q16787 3333 aa15.14■□□□□ 0.01
SHKBP1-209ENST00000595803 USP17L5A8MUK1 530 aa15.13■□□□□ 0.01
SHKBP1-209ENST00000595803 PRPF3O43395 683 aaKnown RBP15.13■□□□□ 0.01
SHKBP1-209ENST00000595803 USP2O75604 605 aaPredicted RBP15.13■□□□□ 0.01
SHKBP1-209ENST00000595803 PLEKHA8P1O95397 391 aa15.13■□□□□ 0.01
SHKBP1-209ENST00000595803 PRKG1Q13976 671 aa15.13■□□□□ 0.01
SHKBP1-209ENST00000595803 TTLL12Q14166 644 aaPredicted RBP15.13■□□□□ 0.01
SHKBP1-209ENST00000595803 USP17L2Q6R6M4 530 aa15.13■□□□□ 0.01
SHKBP1-209ENST00000595803 NBPF11Q86T75 865 aa15.13■□□□□ 0.01
SHKBP1-209ENST00000595803 SRBD1Q8N5C6 995 aaKnown RBP15.13■□□□□ 0.01
SHKBP1-209ENST00000595803 WRNIP1Q96S55 665 aa15.13■□□□□ 0.01
SHKBP1-209ENST00000595803 TMEM106CQ9BVX2 250 aa15.13■□□□□ 0.01
SHKBP1-209ENST00000595803 SH2D4AQ9H788 454 aa15.13■□□□□ 0.01
SHKBP1-209ENST00000595803 PICK1Q9NRD5 415 aa15.13■□□□□ 0.01
SHKBP1-209ENST00000595803 MAD2L2Q9UI95 211 aa15.13■□□□□ 0.01
SHKBP1-209ENST00000595803 SYNPO2Q9UMS6 1093 aa15.13■□□□□ 0.01
SHKBP1-209ENST00000595803 V9GY48 417 aaPredicted RBP15.13■□□□□ 0.01
SHKBP1-209ENST00000595803 STK36Q9NRP7 1315 aa15.13■□□□□ 0.01
SHKBP1-209ENST00000595803 UNC80Q8N2C7 3258 aa15.12■□□□□ 0.01
SHKBP1-209ENST00000595803 VPS37CA5D8V6 355 aaPredicted RBP15.12■□□□□ 0.01
SHKBP1-209ENST00000595803 KLRF2D3W0D1 207 aa15.12■□□□□ 0.01
SHKBP1-209ENST00000595803 F5H6K3 240 aa15.12■□□□□ 0.01
SHKBP1-209ENST00000595803 DEXIO95424 95 aa15.12■□□□□ 0.01
SHKBP1-209ENST00000595803 BRD1O95696 1058 aa15.12■□□□□ 0.01
SHKBP1-209ENST00000595803 ALDH1A1P00352 501 aa15.12■□□□□ 0.01
SHKBP1-209ENST00000595803 GOLGA8HP0CJ92 632 aa15.12■□□□□ 0.01
SHKBP1-209ENST00000595803 PDHBP11177 359 aa15.12■□□□□ 0.01
SHKBP1-209ENST00000595803 SMARCA1P28370 1054 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms