RNA–Protein interactions for RNA: ENST00000593700.5

CAPN12-202, Transcript of calpain 12, humanhuman

TSL 1 (best)

Gene CAPN12, Length 1,118 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN12-202ENST00000593700 CDC27P30260 824 aa17.01■□□□□ 0.31
CAPN12-202ENST00000593700 RAB3GAP1Q15042 981 aa17.01■□□□□ 0.31
CAPN12-202ENST00000593700 ASPRV1Q53RT3 343 aa17.01■□□□□ 0.31
CAPN12-202ENST00000593700 IFFO2Q5TF58 517 aa17.01■□□□□ 0.31
CAPN12-202ENST00000593700 ARMC9Q7Z3E5 817 aa17.01■□□□□ 0.31
CAPN12-202ENST00000593700 RGS22Q8NE09 1264 aa17.01■□□□□ 0.31
CAPN12-202ENST00000593700 DDX11Q96FC9 970 aa17.01■□□□□ 0.31
CAPN12-202ENST00000593700 RNF26Q9BY78 433 aaPredicted RBP17.01■□□□□ 0.31
CAPN12-202ENST00000593700 GBA2Q9HCG7 927 aaPredicted RBP17.01■□□□□ 0.31
CAPN12-202ENST00000593700 CLIP2Q9UDT6 1046 aa17.01■□□□□ 0.31
CAPN12-202ENST00000593700 ATP6V1DQ9Y5K8 247 aa17.01■□□□□ 0.31
CAPN12-202ENST00000593700 TCHHQ07283 1943 aa17■□□□□ 0.31
CAPN12-202ENST00000593700 VPS37CA5D8V6 355 aaPredicted RBP17■□□□□ 0.31
CAPN12-202ENST00000593700 PPP1R12BO60237 982 aaPredicted RBP17■□□□□ 0.31
CAPN12-202ENST00000593700 DEXIO95424 95 aa17■□□□□ 0.31
CAPN12-202ENST00000593700 FMNL1O95466 1100 aaPredicted RBP17■□□□□ 0.31
CAPN12-202ENST00000593700 XBP1P17861 261 aa17■□□□□ 0.31
CAPN12-202ENST00000593700 SYT1P21579 422 aa17■□□□□ 0.31
CAPN12-202ENST00000593700 ADD1P35611 737 aaKnown RBP17■□□□□ 0.31
CAPN12-202ENST00000593700 CAP2P40123 477 aa17■□□□□ 0.31
CAPN12-202ENST00000593700 TRIM29Q14134 588 aa17■□□□□ 0.31
CAPN12-202ENST00000593700 SEPT2Q15019 361 aa17■□□□□ 0.31
CAPN12-202ENST00000593700 TMTC3Q6ZXV5 915 aa17■□□□□ 0.31
CAPN12-202ENST00000593700 MIGA2Q7L4E1 593 aa17■□□□□ 0.31
CAPN12-202ENST00000593700 GBP4Q96PP9 640 aa17■□□□□ 0.31
CAPN12-202ENST00000593700 GNL3Q9BVP2 549 aaKnown RBP eCLIP17■□□□□ 0.31
CAPN12-202ENST00000593700 ZNF408Q9H9D4 720 aa17■□□□□ 0.31
CAPN12-202ENST00000593700 TLL2Q9Y6L7 1015 aa17■□□□□ 0.31
CAPN12-202ENST00000593700 PHIPQ8WWQ0 1821 aa17■□□□□ 0.31
CAPN12-202ENST00000593700 CTNND1O60716 968 aaKnown RBP16.99■□□□□ 0.31
CAPN12-202ENST00000593700 CTDNEP1O95476 244 aa16.99■□□□□ 0.31
CAPN12-202ENST00000593700 GPATCH4Q5T3I0 446 aaKnown RBP16.99■□□□□ 0.31
CAPN12-202ENST00000593700 NBPF12Q5TAG4 269 aaPredicted RBP16.99■□□□□ 0.31
CAPN12-202ENST00000593700 CST9Q5W186 159 aa16.99■□□□□ 0.31
CAPN12-202ENST00000593700 LRRC47Q8N1G4 583 aaKnown RBP16.99■□□□□ 0.31
CAPN12-202ENST00000593700 SLC26A6Q9BXS9 759 aa16.99■□□□□ 0.31
CAPN12-202ENST00000593700 GOPCQ9HD26 462 aa16.99■□□□□ 0.31
CAPN12-202ENST00000593700 ABT1Q9ULW3 272 aaKnown RBP16.99■□□□□ 0.31
CAPN12-202ENST00000593700 CNTNAP5Q8WYK1 1306 aa16.98■□□□□ 0.31
CAPN12-202ENST00000593700 EEF2P13639 858 aaKnown RBP16.98■□□□□ 0.31
CAPN12-202ENST00000593700 ECE1P42892 770 aa16.98■□□□□ 0.31
CAPN12-202ENST00000593700 NTRK3Q16288 839 aa16.98■□□□□ 0.31
CAPN12-202ENST00000593700 CDAN1Q8IWY9 1227 aa16.98■□□□□ 0.31
CAPN12-202ENST00000593700 DCAF4Q8WV16 495 aa16.98■□□□□ 0.31
CAPN12-202ENST00000593700 MKL1Q969V6 931 aa16.98■□□□□ 0.31
CAPN12-202ENST00000593700 C8orf76Q96K31 380 aa16.98■□□□□ 0.31
CAPN12-202ENST00000593700 FAM217BQ9NTX9 383 aaPredicted RBP16.98■□□□□ 0.31
CAPN12-202ENST00000593700 MTMR7Q9Y216 660 aa16.98■□□□□ 0.31
CAPN12-202ENST00000593700 BAZ2BQ9UIF8 2168 aaKnown RBP16.98■□□□□ 0.31
CAPN12-202ENST00000593700 RASSF10A6NK89 507 aa16.97■□□□□ 0.31
CAPN12-202ENST00000593700 BRD1O95696 1058 aa16.97■□□□□ 0.31
CAPN12-202ENST00000593700 ZSCAN22P10073 491 aaPredicted RBP16.97■□□□□ 0.31
CAPN12-202ENST00000593700 PDHBP11177 359 aa16.97■□□□□ 0.31
CAPN12-202ENST00000593700 SMARCA1P28370 1054 aa16.97■□□□□ 0.31
CAPN12-202ENST00000593700 IREB2P48200 963 aaKnown RBP16.97■□□□□ 0.31
CAPN12-202ENST00000593700 MAP3K11Q16584 847 aa16.97■□□□□ 0.31
CAPN12-202ENST00000593700 CCDC96Q2M329 555 aa16.97■□□□□ 0.31
CAPN12-202ENST00000593700 SAPCD2Q86UD0 394 aa16.97■□□□□ 0.31
CAPN12-202ENST00000593700 CLEC10AQ8IUN9 316 aa16.97■□□□□ 0.31
CAPN12-202ENST00000593700 GMCL1P1Q8NEA9 526 aa16.97■□□□□ 0.31
CAPN12-202ENST00000593700 FBXO22Q8NEZ5 403 aa16.97■□□□□ 0.31
CAPN12-202ENST00000593700 PHKBQ93100 1093 aa16.97■□□□□ 0.31
CAPN12-202ENST00000593700 AS3MTQ9HBK9 375 aa16.97■□□□□ 0.31
CAPN12-202ENST00000593700 PICK1Q9NRD5 415 aa16.97■□□□□ 0.31
CAPN12-202ENST00000593700 ISY1Q9ULR0 285 aaKnown RBP16.97■□□□□ 0.31
CAPN12-202ENST00000593700 SCAF8Q9UPN6 1271 aaKnown RBP16.97■□□□□ 0.31
CAPN12-202ENST00000593700 PTPRFP10586 1907 aa16.97■□□□□ 0.31
CAPN12-202ENST00000593700 SSC5DA1L4H1 1573 aa16.97■□□□□ 0.31
CAPN12-202ENST00000593700 SLURP2P0DP57 97 aa16.96■□□□□ 0.31
CAPN12-202ENST00000593700 TTLL12Q14166 644 aaPredicted RBP16.96■□□□□ 0.31
CAPN12-202ENST00000593700 DEFB115Q30KQ5 88 aa16.96■□□□□ 0.31
CAPN12-202ENST00000593700 SCYL3Q8IZE3 742 aa16.96■□□□□ 0.31
CAPN12-202ENST00000593700 WRNIP1Q96S55 665 aa16.96■□□□□ 0.31
CAPN12-202ENST00000593700 FEZ1Q99689 392 aa16.96■□□□□ 0.31
CAPN12-202ENST00000593700 ALG1Q9BT22 464 aa16.96■□□□□ 0.31
CAPN12-202ENST00000593700 MAD2L2Q9UI95 211 aa16.96■□□□□ 0.31
CAPN12-202ENST00000593700 PALM3A6NDB9 673 aaPredicted RBP16.95■□□□□ 0.3
CAPN12-202ENST00000593700 PHF20L1A8MW92 1017 aa16.95■□□□□ 0.3
CAPN12-202ENST00000593700 GOLGA6L22H0YM25 854 aa16.95■□□□□ 0.3
CAPN12-202ENST00000593700 PRPF3O43395 683 aaKnown RBP16.95■□□□□ 0.3
CAPN12-202ENST00000593700 RAD21O60216 631 aa16.95■□□□□ 0.3
CAPN12-202ENST00000593700 PLEKHA8P1O95397 391 aa16.95■□□□□ 0.3
CAPN12-202ENST00000593700 F13A1P00488 732 aa16.95■□□□□ 0.3
CAPN12-202ENST00000593700 SNHG28P0DPA3 235 aa16.95■□□□□ 0.3
CAPN12-202ENST00000593700 GUCY1A2P33402 732 aa16.95■□□□□ 0.3
CAPN12-202ENST00000593700 HUNKP57058 714 aa16.95■□□□□ 0.3
CAPN12-202ENST00000593700 SPZ1Q9BXG8 430 aa16.95■□□□□ 0.3
CAPN12-202ENST00000593700 SEC63Q9UGP8 760 aaKnown RBP16.95■□□□□ 0.3
CAPN12-202ENST00000593700 PARP14Q460N5 1801 aa16.94■□□□□ 0.3
CAPN12-202ENST00000593700 KLRF2D3W0D1 207 aa16.94■□□□□ 0.3
CAPN12-202ENST00000593700 SLC1A4P43007 532 aa16.94■□□□□ 0.3
CAPN12-202ENST00000593700 FMR1Q06787 632 aaKnown RBP eCLIP16.94■□□□□ 0.3
CAPN12-202ENST00000593700 ZNF543Q08ER8 600 aa16.94■□□□□ 0.3
CAPN12-202ENST00000593700 SAFBQ15424 915 aaKnown RBP eCLIP16.94■□□□□ 0.3
CAPN12-202ENST00000593700 SLFN13Q68D06 897 aa16.94■□□□□ 0.3
CAPN12-202ENST00000593700 NBPF11Q86T75 865 aa16.94■□□□□ 0.3
CAPN12-202ENST00000593700 FAM177A1Q8N128 213 aaPredicted RBP16.94■□□□□ 0.3
CAPN12-202ENST00000593700 CCDC82Q8N4S0 544 aa16.94■□□□□ 0.3
CAPN12-202ENST00000593700 TNPO1Q92973 898 aaKnown RBP16.94■□□□□ 0.3
CAPN12-202ENST00000593700 CCDC102AQ96A19 550 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms