RNA–Protein interactions for RNA: ENST00000592864.2

CACNA1A-211, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 3 BASIC

Gene CACNA1A, Length 1,623 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-211ENST00000592864 GPATCH4Q5T3I0 446 aaKnown RBP16.25■□□□□ 0.19
CACNA1A-211ENST00000592864 OTUD7BQ6GQQ9 843 aa16.25■□□□□ 0.19
CACNA1A-211ENST00000592864 APOA5Q6Q788 366 aa16.25■□□□□ 0.19
CACNA1A-211ENST00000592864 CTCFLQ8NI51 663 aaPredicted RBP16.25■□□□□ 0.19
CACNA1A-211ENST00000592864 ZSCAN31Q96LW9 406 aaPredicted RBP16.25■□□□□ 0.19
CACNA1A-211ENST00000592864 BRPF3Q9ULD4 1205 aa16.25■□□□□ 0.19
CACNA1A-211ENST00000592864 LIMCH1Q9UPQ0 1083 aa16.25■□□□□ 0.19
CACNA1A-211ENST00000592864 LOC285556D6RIA3 1793 aa16.25■□□□□ 0.19
CACNA1A-211ENST00000592864 CCDC196A0A1B0GTZ2 297 aa16.24■□□□□ 0.19
CACNA1A-211ENST00000592864 USP17L15C9J2P7 530 aa16.24■□□□□ 0.19
CACNA1A-211ENST00000592864 USP17L13C9JLJ4 530 aa16.24■□□□□ 0.19
CACNA1A-211ENST00000592864 USP17L11C9JVI0 530 aa16.24■□□□□ 0.19
CACNA1A-211ENST00000592864 USP17L18D6R9N7 530 aa16.24■□□□□ 0.19
CACNA1A-211ENST00000592864 USP17L22D6RA61 530 aa16.24■□□□□ 0.19
CACNA1A-211ENST00000592864 USP17L17D6RBQ6 530 aa16.24■□□□□ 0.19
CACNA1A-211ENST00000592864 USP17L19D6RCP7 530 aa16.24■□□□□ 0.19
CACNA1A-211ENST00000592864 USP17L20D6RJB6 530 aa16.24■□□□□ 0.19
CACNA1A-211ENST00000592864 PARP1P09874 1014 aaKnown RBP16.24■□□□□ 0.19
CACNA1A-211ENST00000592864 SNHG28P0DPA3 235 aa16.24■□□□□ 0.19
CACNA1A-211ENST00000592864 GNAQP50148 359 aa16.24■□□□□ 0.19
CACNA1A-211ENST00000592864 USP17L24Q0WX57 530 aa16.24■□□□□ 0.19
CACNA1A-211ENST00000592864 GRM1Q13255 1194 aa16.24■□□□□ 0.19
CACNA1A-211ENST00000592864 ASPRV1Q53RT3 343 aa16.24■□□□□ 0.19
CACNA1A-211ENST00000592864 FANCBQ8NB91 859 aa16.24■□□□□ 0.19
CACNA1A-211ENST00000592864 NUP133Q8WUM0 1156 aa16.24■□□□□ 0.19
CACNA1A-211ENST00000592864 AGTPBP1Q9UPW5 1226 aa16.24■□□□□ 0.19
CACNA1A-211ENST00000592864 MTMR7Q9Y216 660 aa16.24■□□□□ 0.19
CACNA1A-211ENST00000592864 SLC45A1Q9Y2W3 748 aa16.24■□□□□ 0.19
CACNA1A-211ENST00000592864 WDR33Q9C0J8 1336 aaKnown RBP16.24■□□□□ 0.19
CACNA1A-211ENST00000592864 PLA2G6O60733 806 aa16.23■□□□□ 0.19
CACNA1A-211ENST00000592864 VCAM1P19320 739 aa16.23■□□□□ 0.19
CACNA1A-211ENST00000592864 HOXA7P31268 230 aaPredicted RBP16.23■□□□□ 0.19
CACNA1A-211ENST00000592864 MAP2K2P36507 400 aa16.23■□□□□ 0.19
CACNA1A-211ENST00000592864 GRM4Q14833 912 aa16.23■□□□□ 0.19
CACNA1A-211ENST00000592864 CCDC96Q2M329 555 aa16.23■□□□□ 0.19
CACNA1A-211ENST00000592864 ANKRD23Q86SG2 305 aa16.23■□□□□ 0.19
CACNA1A-211ENST00000592864 SPICE1Q8N0Z3 855 aa16.23■□□□□ 0.19
CACNA1A-211ENST00000592864 CHURC1Q8WUH1 139 aa16.23■□□□□ 0.19
CACNA1A-211ENST00000592864 LZTS2Q9BRK4 669 aa16.23■□□□□ 0.19
CACNA1A-211ENST00000592864 RBM28Q9NW13 759 aaKnown RBP16.23■□□□□ 0.19
CACNA1A-211ENST00000592864 FEM1BQ9UK73 627 aa16.23■□□□□ 0.19
CACNA1A-211ENST00000592864 OSBPP22059 807 aa16.23■□□□□ 0.19
CACNA1A-211ENST00000592864 PDIA3P30101 505 aaKnown RBP16.23■□□□□ 0.19
CACNA1A-211ENST00000592864 TM4SF4P48230 202 aa16.23■□□□□ 0.19
CACNA1A-211ENST00000592864 METAP2P50579 478 aaKnown RBP eCLIP16.23■□□□□ 0.19
CACNA1A-211ENST00000592864 KIF23Q02241 960 aaPredicted RBP16.23■□□□□ 0.19
CACNA1A-211ENST00000592864 ZNF543Q08ER8 600 aa16.23■□□□□ 0.19
CACNA1A-211ENST00000592864 KIAA1755Q5JYT7 1200 aa16.23■□□□□ 0.19
CACNA1A-211ENST00000592864 FAM83BQ5T0W9 1011 aa16.23■□□□□ 0.19
CACNA1A-211ENST00000592864 FAM160B2Q86V87 743 aa16.23■□□□□ 0.19
CACNA1A-211ENST00000592864 SLKQ9H2G2 1235 aaPredicted RBP16.23■□□□□ 0.19
CACNA1A-211ENST00000592864 RPAP3Q9H6T3 665 aaPredicted RBP16.23■□□□□ 0.19
CACNA1A-211ENST00000592864 ZCCHC17Q9NP64 241 aaKnown RBP16.23■□□□□ 0.19
CACNA1A-211ENST00000592864 ISY1Q9ULR0 285 aaKnown RBP16.23■□□□□ 0.19
CACNA1A-211ENST00000592864 PALM3A6NDB9 673 aaPredicted RBP16.22■□□□□ 0.19
CACNA1A-211ENST00000592864 GOLGA8AA7E2F4 631 aa16.22■□□□□ 0.19
CACNA1A-211ENST00000592864 GOLGA8BA8MQT2 603 aa16.22■□□□□ 0.19
CACNA1A-211ENST00000592864 DHX16O60231 1041 aaKnown RBP16.22■□□□□ 0.19
CACNA1A-211ENST00000592864 VEGFBP49765 207 aa16.22■□□□□ 0.19
CACNA1A-211ENST00000592864 MOGSQ13724 837 aa16.22■□□□□ 0.19
CACNA1A-211ENST00000592864 CATSPERGQ6ZRH7 1159 aa16.22■□□□□ 0.19
CACNA1A-211ENST00000592864 MICU3Q86XE3 530 aa16.22■□□□□ 0.19
CACNA1A-211ENST00000592864 BRI3BPQ8WY22 251 aa16.22■□□□□ 0.19
CACNA1A-211ENST00000592864 TANGO6Q9C0B7 1094 aa16.22■□□□□ 0.19
CACNA1A-211ENST00000592864 SH2B1Q9NRF2 756 aaPredicted RBP16.22■□□□□ 0.19
CACNA1A-211ENST00000592864 HOXC10Q9NYD6 342 aa16.22■□□□□ 0.19
CACNA1A-211ENST00000592864 PNMA3Q9UL41 463 aa16.22■□□□□ 0.19
CACNA1A-211ENST00000592864 TPCN1Q9ULQ1 816 aa16.22■□□□□ 0.19
CACNA1A-211ENST00000592864 SMARCA1P28370 1054 aa16.21■□□□□ 0.19
CACNA1A-211ENST00000592864 IKQ13123 557 aaPredicted RBP16.21■□□□□ 0.19
CACNA1A-211ENST00000592864 COG2Q14746 738 aa16.21■□□□□ 0.19
CACNA1A-211ENST00000592864 RTN1Q16799 776 aa16.21■□□□□ 0.19
CACNA1A-211ENST00000592864 GPAT2Q6NUI2 795 aa16.21■□□□□ 0.19
CACNA1A-211ENST00000592864 KCTD1Q719H9 257 aa16.21■□□□□ 0.19
CACNA1A-211ENST00000592864 SNX21Q969T3 373 aa16.21■□□□□ 0.19
CACNA1A-211ENST00000592864 LARP6Q9BRS8 491 aaKnown RBP16.21■□□□□ 0.19
CACNA1A-211ENST00000592864 MYL10Q9BUA6 226 aa16.21■□□□□ 0.19
CACNA1A-211ENST00000592864 MAD2L2Q9UI95 211 aa16.21■□□□□ 0.19
CACNA1A-211ENST00000592864 BTBD19C9JJ37 291 aa16.2■□□□□ 0.18
CACNA1A-211ENST00000592864 TMEM232C9JQI7 657 aa16.2■□□□□ 0.18
CACNA1A-211ENST00000592864 KLRF2D3W0D1 207 aa16.2■□□□□ 0.18
CACNA1A-211ENST00000592864 FOXN1O15353 648 aa16.2■□□□□ 0.18
CACNA1A-211ENST00000592864 PFKFB2O60825 505 aa16.2■□□□□ 0.18
CACNA1A-211ENST00000592864 ALDH1A1P00352 501 aa16.2■□□□□ 0.18
CACNA1A-211ENST00000592864 FDX1P10109 184 aa16.2■□□□□ 0.18
CACNA1A-211ENST00000592864 STAT2P52630 851 aa16.2■□□□□ 0.18
CACNA1A-211ENST00000592864 IRX3P78415 501 aaPredicted RBP16.2■□□□□ 0.18
CACNA1A-211ENST00000592864 DGKZQ13574 1117 aa16.2■□□□□ 0.18
CACNA1A-211ENST00000592864 TREML2Q5T2D2 321 aa16.2■□□□□ 0.18
CACNA1A-211ENST00000592864 CPLX2Q6PUV4 134 aaKnown RBP16.2■□□□□ 0.18
CACNA1A-211ENST00000592864 BTNL9Q6UXG8 535 aa16.2■□□□□ 0.18
CACNA1A-211ENST00000592864 NOL8Q76FK4 1167 aaKnown RBP16.2■□□□□ 0.18
CACNA1A-211ENST00000592864 PRPF38AQ8NAV1 312 aaKnown RBP16.2■□□□□ 0.18
CACNA1A-211ENST00000592864 NUP88Q99567 741 aaPredicted RBP16.2■□□□□ 0.18
CACNA1A-211ENST00000592864 GPCPD1Q9NPB8 672 aa16.2■□□□□ 0.18
CACNA1A-211ENST00000592864 NID2Q14112 1375 aa16.2■□□□□ 0.18
CACNA1A-211ENST00000592864 FRMPD2Q68DX3 1309 aaPredicted RBP16.19■□□□□ 0.18
CACNA1A-211ENST00000592864 MYPNQ86TC9 1320 aa16.19■□□□□ 0.18
CACNA1A-211ENST00000592864 PDHXO00330 501 aa16.19■□□□□ 0.18
CACNA1A-211ENST00000592864 AOC2O75106 756 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms