RNA–Protein interactions for RNA: ENST00000592619.5

VMP1-215, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 838 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-215ENST00000592619 BVESQ8NE79 360 aa8.92□□□□□ -0.98
VMP1-215ENST00000592619 RIN3Q8TB24 985 aa8.92□□□□□ -0.98
VMP1-215ENST00000592619 RNF141Q8WVD5 230 aa8.92□□□□□ -0.98
VMP1-215ENST00000592619 WFDC12Q8WWY7 111 aa8.92□□□□□ -0.98
VMP1-215ENST00000592619 ZNF512BQ96KM6 892 aaPredicted RBP8.92□□□□□ -0.98
VMP1-215ENST00000592619 AARSD1Q9BTE6 412 aaKnown RBP8.92□□□□□ -0.98
VMP1-215ENST00000592619 PRDM10Q9NQV6 1147 aa8.92□□□□□ -0.98
VMP1-215ENST00000592619 FGFR1P11362 822 aa8.91□□□□□ -0.98
VMP1-215ENST00000592619 NOS3P29474 1203 aa8.91□□□□□ -0.98
VMP1-215ENST00000592619 ZNF227Q86WZ6 799 aa8.91□□□□□ -0.98
VMP1-215ENST00000592619 DZIP1LQ8IYY4 767 aaKnown RBP8.91□□□□□ -0.98
VMP1-215ENST00000592619 FBLIM1Q8WUP2 373 aa8.91□□□□□ -0.98
VMP1-215ENST00000592619 NINJ1Q92982 152 aa8.91□□□□□ -0.98
VMP1-215ENST00000592619 EXOC2Q96KP1 924 aa8.91□□□□□ -0.98
VMP1-215ENST00000592619 FGD4Q96M96 766 aa8.91□□□□□ -0.98
VMP1-215ENST00000592619 GP6Q9HCN6 339 aa8.91□□□□□ -0.98
VMP1-215ENST00000592619 APBA3O96018 575 aa8.9□□□□□ -0.98
VMP1-215ENST00000592619 ADAT2Q7Z6V5 191 aaKnown RBP8.9□□□□□ -0.98
VMP1-215ENST00000592619 CDH24Q86UP0 819 aa8.9□□□□□ -0.98
VMP1-215ENST00000592619 ARHGEF39Q8N4T4 335 aa8.9□□□□□ -0.98
VMP1-215ENST00000592619 MYRFLQ96LU7 910 aa8.9□□□□□ -0.98
VMP1-215ENST00000592619 IPO9Q96P70 1041 aaKnown RBP8.9□□□□□ -0.98
VMP1-215ENST00000592619 CDC6Q99741 560 aa8.9□□□□□ -0.98
VMP1-215ENST00000592619 NCOA5Q9HCD5 579 aaKnown RBP8.9□□□□□ -0.98
VMP1-215ENST00000592619 PRR13Q9NZ81 148 aa8.9□□□□□ -0.98
VMP1-215ENST00000592619 MRPS23Q9Y3D9 190 aaKnown RBP8.9□□□□□ -0.98
VMP1-215ENST00000592619 TRBV23-1A0A0A0MS06 115 aa8.89□□□□□ -0.99
VMP1-215ENST00000592619 NOP56O00567 594 aaKnown RBP8.89□□□□□ -0.99
VMP1-215ENST00000592619 PLD2O14939 933 aa8.89□□□□□ -0.99
VMP1-215ENST00000592619 IGHA1P01876 353 aa8.89□□□□□ -0.99
VMP1-215ENST00000592619 ITGA4P13612 1032 aa8.89□□□□□ -0.99
VMP1-215ENST00000592619 L1CAMP32004 1257 aa8.89□□□□□ -0.99
VMP1-215ENST00000592619 IREB2P48200 963 aaKnown RBP8.89□□□□□ -0.99
VMP1-215ENST00000592619 ADGRE1Q14246 886 aa8.89□□□□□ -0.99
VMP1-215ENST00000592619 NBPF9Q3BBW0 867 aa8.89□□□□□ -0.99
VMP1-215ENST00000592619 FNDC3BQ53EP0 1204 aaKnown RBP8.89□□□□□ -0.99
VMP1-215ENST00000592619 TM4SF20Q53R12 229 aa8.89□□□□□ -0.99
VMP1-215ENST00000592619 SGO2Q562F6 1265 aa8.89□□□□□ -0.99
VMP1-215ENST00000592619 FAM209AQ5JX71 171 aa8.89□□□□□ -0.99
VMP1-215ENST00000592619 POMZP3Q6PJE2 187 aa8.89□□□□□ -0.99
VMP1-215ENST00000592619 KRT26Q7Z3Y9 468 aa8.89□□□□□ -0.99
VMP1-215ENST00000592619 CRACR2BQ8N4Y2 399 aaPredicted RBP8.89□□□□□ -0.99
VMP1-215ENST00000592619 COX4I2Q96KJ9 171 aa8.89□□□□□ -0.99
VMP1-215ENST00000592619 MRGPRX3Q96LB0 322 aa8.89□□□□□ -0.99
VMP1-215ENST00000592619 EMC9Q9Y3B6 208 aa8.89□□□□□ -0.99
VMP1-215ENST00000592619 DNAJC25-GNG10A0A024R161 153 aa8.88□□□□□ -0.99
VMP1-215ENST00000592619 DYNC1LI2O43237 492 aaPredicted RBP8.88□□□□□ -0.99
VMP1-215ENST00000592619 CYP7A1P22680 504 aa8.88□□□□□ -0.99
VMP1-215ENST00000592619 COL8A1P27658 744 aa8.88□□□□□ -0.99
VMP1-215ENST00000592619 AMPD3Q01432 767 aa8.88□□□□□ -0.99
VMP1-215ENST00000592619 MBTPS1Q14703 1052 aa8.88□□□□□ -0.99
VMP1-215ENST00000592619 YOD1Q5VVQ6 348 aaPredicted RBP8.88□□□□□ -0.99
VMP1-215ENST00000592619 ALYREFQ86V81 257 aaKnown RBP8.88□□□□□ -0.99
VMP1-215ENST00000592619 NIM1KQ8IY84 436 aa8.88□□□□□ -0.99
VMP1-215ENST00000592619 PPP1R14AQ96A00 147 aa8.88□□□□□ -0.99
VMP1-215ENST00000592619 MFSD3Q96ES6 412 aa8.88□□□□□ -0.99
VMP1-215ENST00000592619 KRTAP4-8Q9BYQ9 185 aa8.88□□□□□ -0.99
VMP1-215ENST00000592619 C1GALT1Q9NS00 363 aa8.88□□□□□ -0.99
VMP1-215ENST00000592619 DIS3Q9Y2L1 958 aaKnown RBP8.88□□□□□ -0.99
VMP1-215ENST00000592619 SUGT1Q9Y2Z0 365 aa8.88□□□□□ -0.99
VMP1-215ENST00000592619 PCDHB12Q9Y5F1 795 aa8.88□□□□□ -0.99
VMP1-215ENST00000592619 FHOD1Q9Y613 1164 aa8.88□□□□□ -0.99
VMP1-215ENST00000592619 PABPC1P11940 636 aaKnown RBP8.87□□□□□ -0.99
VMP1-215ENST00000592619 BMP3P12645 472 aa8.87□□□□□ -0.99
VMP1-215ENST00000592619 MAP4P27816 1152 aaKnown RBP8.87□□□□□ -0.99
VMP1-215ENST00000592619 PABPC4Q13310 644 aaKnown RBP eCLIP8.87□□□□□ -0.99
VMP1-215ENST00000592619 FAM20CQ8IXL6 584 aa8.87□□□□□ -0.99
VMP1-215ENST00000592619 ARMC10Q8N2F6 343 aa8.87□□□□□ -0.99
VMP1-215ENST00000592619 SYTL5Q8TDW5 730 aaPredicted RBP8.87□□□□□ -0.99
VMP1-215ENST00000592619 UTP4Q969X6 686 aaKnown RBP8.87□□□□□ -0.99
VMP1-215ENST00000592619 MRPL4Q9BYD3 311 aaKnown RBP8.87□□□□□ -0.99
VMP1-215ENST00000592619 AKT3Q9Y243 479 aa8.87□□□□□ -0.99
VMP1-215ENST00000592619 FAM95CA0A1B0GW59 222 aa8.86□□□□□ -0.99
VMP1-215ENST00000592619 EOMESO95936 686 aa8.86□□□□□ -0.99
VMP1-215ENST00000592619 ZNF445P59923 1031 aa8.86□□□□□ -0.99
VMP1-215ENST00000592619 SUMO1P63165 101 aaKnown RBP8.86□□□□□ -0.99
VMP1-215ENST00000592619 CBX2Q14781 532 aaPredicted RBP8.86□□□□□ -0.99
VMP1-215ENST00000592619 NSMFQ6X4W1 530 aa8.86□□□□□ -0.99
VMP1-215ENST00000592619 TRIM59Q8IWR1 403 aa8.86□□□□□ -0.99
VMP1-215ENST00000592619 GIMAP7Q8NHV1 300 aa8.86□□□□□ -0.99
VMP1-215ENST00000592619 OSBP2Q969R2 916 aa8.86□□□□□ -0.99
VMP1-215ENST00000592619 SCARF2Q96GP6 870 aaPredicted RBP8.86□□□□□ -0.99
VMP1-215ENST00000592619 LGR6Q9HBX8 967 aa8.86□□□□□ -0.99
VMP1-215ENST00000592619 KCNQ2O43526 872 aa8.85□□□□□ -0.99
VMP1-215ENST00000592619 GRIA2P42262 883 aa8.85□□□□□ -0.99
VMP1-215ENST00000592619 NOL9Q5SY16 702 aaKnown RBP8.85□□□□□ -0.99
VMP1-215ENST00000592619 RPUSD2Q8IZ73 545 aaKnown RBP8.85□□□□□ -0.99
VMP1-215ENST00000592619 CCDC140Q96MF4 163 aa8.85□□□□□ -0.99
VMP1-215ENST00000592619 DUSP23Q9BVJ7 150 aa8.85□□□□□ -0.99
VMP1-215ENST00000592619 PRDM14Q9GZV8 571 aa8.85□□□□□ -0.99
VMP1-215ENST00000592619 CGGBP1Q9UFW8 167 aaPredicted RBP8.85□□□□□ -0.99
VMP1-215ENST00000592619 FBXL21Q9UKT6 434 aa8.85□□□□□ -0.99
VMP1-215ENST00000592619 PRODHO43272 600 aa8.84□□□□□ -0.99
VMP1-215ENST00000592619 TBX1O43435 398 aa8.84□□□□□ -0.99
VMP1-215ENST00000592619 RAB11FIP3O75154 756 aa8.84□□□□□ -0.99
VMP1-215ENST00000592619 RAPGEF3O95398 923 aa8.84□□□□□ -0.99
VMP1-215ENST00000592619 RXRBP28702 533 aa8.84□□□□□ -0.99
VMP1-215ENST00000592619 CDK5R2Q13319 367 aa8.84□□□□□ -0.99
VMP1-215ENST00000592619 GRB10Q13322 594 aa8.84□□□□□ -0.99
VMP1-215ENST00000592619 C21orf62-AS1Q17RA5 79 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms