RNA–Protein interactions for RNA: ENST00000592561.5

PSMD8-208, Transcript of proteasome 26S subunit, non-ATPase 8, human

TSL 2

Gene PSMD8, Length 771 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMD8-208	ENST00000592561	GOPC	Q9HD26	462 aa		12.84	□□□□□ -0.35
PSMD8-208	ENST00000592561	EMILIN3	Q9NT22	766 aa		12.84	□□□□□ -0.35
PSMD8-208	ENST00000592561	TMOD4	Q9NZQ9	345 aa		12.84	□□□□□ -0.35
PSMD8-208	ENST00000592561	PTPRF	P10586	1907 aa		12.84	□□□□□ -0.35
PSMD8-208	ENST00000592561	RPS6KB1	P23443	525 aa		12.83	□□□□□ -0.36
PSMD8-208	ENST00000592561	TM4SF4	P48230	202 aa		12.83	□□□□□ -0.36
PSMD8-208	ENST00000592561	ZYX	Q15942	572 aa	Known RBP	12.83	□□□□□ -0.36
PSMD8-208	ENST00000592561	TMEM67	Q5HYA8	995 aa		12.83	□□□□□ -0.36
PSMD8-208	ENST00000592561	IFIT1B	Q5T764	474 aa	Known RBP	12.83	□□□□□ -0.36
PSMD8-208	ENST00000592561	RUFY3	Q7L099	469 aa		12.83	□□□□□ -0.36
PSMD8-208	ENST00000592561	LRRC47	Q8N1G4	583 aa	Known RBP	12.83	□□□□□ -0.36
PSMD8-208	ENST00000592561	IGDCC4	Q8TDY8	1250 aa		12.83	□□□□□ -0.36
PSMD8-208	ENST00000592561	BRI3BP	Q8WY22	251 aa		12.83	□□□□□ -0.36
PSMD8-208	ENST00000592561	ZIC5	Q96T25	663 aa		12.83	□□□□□ -0.36
PSMD8-208	ENST00000592561	LOC285556	D6RIA3	1793 aa		12.83	□□□□□ -0.36
PSMD8-208	ENST00000592561		F5H6K3	240 aa		12.82	□□□□□ -0.36
PSMD8-208	ENST00000592561	SH2B2	O14492	632 aa	Predicted RBP	12.82	□□□□□ -0.36
PSMD8-208	ENST00000592561	CPA1	P15085	419 aa		12.82	□□□□□ -0.36
PSMD8-208	ENST00000592561	VCAM1	P19320	739 aa		12.82	□□□□□ -0.36
PSMD8-208	ENST00000592561	LIFR	P42702	1097 aa		12.82	□□□□□ -0.36
PSMD8-208	ENST00000592561	KLRC3	Q07444	240 aa		12.82	□□□□□ -0.36
PSMD8-208	ENST00000592561	DGKZ	Q13574	1117 aa		12.82	□□□□□ -0.36
PSMD8-208	ENST00000592561	WTAP	Q15007	396 aa		12.82	□□□□□ -0.36
PSMD8-208	ENST00000592561	GADL1	Q6ZQY3	521 aa		12.82	□□□□□ -0.36
PSMD8-208	ENST00000592561	ANKRD23	Q86SG2	305 aa		12.82	□□□□□ -0.36
PSMD8-208	ENST00000592561	HS6ST3	Q8IZP7	471 aa		12.82	□□□□□ -0.36
PSMD8-208	ENST00000592561	TMTC2	Q8N394	836 aa		12.82	□□□□□ -0.36
PSMD8-208	ENST00000592561	FBXL16	Q8N461	479 aa		12.82	□□□□□ -0.36
PSMD8-208	ENST00000592561	PTPN18	Q99952	460 aa		12.82	□□□□□ -0.36
PSMD8-208	ENST00000592561	KAT14	Q9H8E8	782 aa		12.82	□□□□□ -0.36
PSMD8-208	ENST00000592561	LY9	Q9HBG7	655 aa		12.82	□□□□□ -0.36
PSMD8-208	ENST00000592561	ZCCHC17	Q9NP64	241 aa	Known RBP	12.82	□□□□□ -0.36
PSMD8-208	ENST00000592561	AGTPBP1	Q9UPW5	1226 aa		12.82	□□□□□ -0.36
PSMD8-208	ENST00000592561	SLC45A1	Q9Y2W3	748 aa		12.82	□□□□□ -0.36
PSMD8-208	ENST00000592561	CYP46A1	Q9Y6A2	500 aa		12.82	□□□□□ -0.36
PSMD8-208	ENST00000592561	MYH4	Q9Y623	1939 aa		12.82	□□□□□ -0.36
PSMD8-208	ENST00000592561	BTBD19	C9JJ37	291 aa		12.81	□□□□□ -0.36
PSMD8-208	ENST00000592561	WDR46	O15213	610 aa	Known RBP	12.81	□□□□□ -0.36
PSMD8-208	ENST00000592561	NDUFB10	O96000	172 aa		12.81	□□□□□ -0.36
PSMD8-208	ENST00000592561	KIAA1755	Q5JYT7	1200 aa		12.81	□□□□□ -0.36
PSMD8-208	ENST00000592561	OTUD7B	Q6GQQ9	843 aa		12.81	□□□□□ -0.36
PSMD8-208	ENST00000592561	GPAT2	Q6NUI2	795 aa		12.81	□□□□□ -0.36
PSMD8-208	ENST00000592561	IFNL1	Q8IU54	200 aa		12.81	□□□□□ -0.36
PSMD8-208	ENST00000592561	SPICE1	Q8N0Z3	855 aa		12.81	□□□□□ -0.36
PSMD8-208	ENST00000592561	PNMA1	Q8ND90	353 aa		12.81	□□□□□ -0.36
PSMD8-208	ENST00000592561	GMCL1	Q96IK5	515 aa		12.81	□□□□□ -0.36
PSMD8-208	ENST00000592561	TCEANC2	Q96MN5	208 aa		12.81	□□□□□ -0.36
PSMD8-208	ENST00000592561	KIF2C	Q99661	725 aa		12.81	□□□□□ -0.36
PSMD8-208	ENST00000592561	LRRC2	Q9BYS8	371 aa		12.81	□□□□□ -0.36
PSMD8-208	ENST00000592561	UPF3B	Q9BZI7	483 aa	Known RBP	12.81	□□□□□ -0.36
PSMD8-208	ENST00000592561	IGF2BP3	O00425	579 aa	Known RBP eCLIP	12.8	□□□□□ -0.36
PSMD8-208	ENST00000592561	STK25	O00506	426 aa		12.8	□□□□□ -0.36
PSMD8-208	ENST00000592561	RAD21	O60216	631 aa		12.8	□□□□□ -0.36
PSMD8-208	ENST00000592561	HOXA7	P31268	230 aa	Predicted RBP	12.8	□□□□□ -0.36
PSMD8-208	ENST00000592561	PABPC4	Q13310	644 aa	Known RBP eCLIP	12.8	□□□□□ -0.36
PSMD8-208	ENST00000592561	TREML2	Q5T2D2	321 aa		12.8	□□□□□ -0.36
PSMD8-208	ENST00000592561	SLFN13	Q68D06	897 aa		12.8	□□□□□ -0.36
PSMD8-208	ENST00000592561	SGMS1	Q86VZ5	419 aa		12.8	□□□□□ -0.36
PSMD8-208	ENST00000592561	FAM43A	Q8N2R8	423 aa		12.8	□□□□□ -0.36
PSMD8-208	ENST00000592561	AGXT2	Q9BYV1	514 aa		12.8	□□□□□ -0.36
PSMD8-208	ENST00000592561	SENP2	Q9HC62	589 aa		12.8	□□□□□ -0.36
PSMD8-208	ENST00000592561	GPHN	Q9NQX3	736 aa	Predicted RBP	12.8	□□□□□ -0.36
PSMD8-208	ENST00000592561	CCDC69	A6NI79	296 aa		12.79	□□□□□ -0.36
PSMD8-208	ENST00000592561	USP17L15	C9J2P7	530 aa		12.79	□□□□□ -0.36
PSMD8-208	ENST00000592561	USP17L13	C9JLJ4	530 aa		12.79	□□□□□ -0.36
PSMD8-208	ENST00000592561	USP17L11	C9JVI0	530 aa		12.79	□□□□□ -0.36
PSMD8-208	ENST00000592561	USP17L18	D6R9N7	530 aa		12.79	□□□□□ -0.36
PSMD8-208	ENST00000592561	USP17L22	D6RA61	530 aa		12.79	□□□□□ -0.36
PSMD8-208	ENST00000592561	USP17L17	D6RBQ6	530 aa		12.79	□□□□□ -0.36
PSMD8-208	ENST00000592561	USP17L19	D6RCP7	530 aa		12.79	□□□□□ -0.36
PSMD8-208	ENST00000592561	USP17L20	D6RJB6	530 aa		12.79	□□□□□ -0.36
PSMD8-208	ENST00000592561	PDHX	O00330	501 aa		12.79	□□□□□ -0.36
PSMD8-208	ENST00000592561	ALDH1A1	P00352	501 aa		12.79	□□□□□ -0.36
PSMD8-208	ENST00000592561	SNHG28	P0DPA3	235 aa		12.79	□□□□□ -0.36
PSMD8-208	ENST00000592561	PDHB	P11177	359 aa		12.79	□□□□□ -0.36
PSMD8-208	ENST00000592561	DDIT3	P35638	169 aa		12.79	□□□□□ -0.36
PSMD8-208	ENST00000592561	SLC1A4	P43007	532 aa		12.79	□□□□□ -0.36
PSMD8-208	ENST00000592561	FGD1	P98174	961 aa		12.79	□□□□□ -0.36
PSMD8-208	ENST00000592561	USP17L24	Q0WX57	530 aa		12.79	□□□□□ -0.36
PSMD8-208	ENST00000592561	NFXL1	Q6ZNB6	911 aa		12.79	□□□□□ -0.36
PSMD8-208	ENST00000592561		Q6ZUG5	572 aa		12.79	□□□□□ -0.36
PSMD8-208	ENST00000592561	DCAF4	Q8WV16	495 aa		12.79	□□□□□ -0.36
PSMD8-208	ENST00000592561	RPAP3	Q9H6T3	665 aa	Predicted RBP	12.79	□□□□□ -0.36
PSMD8-208	ENST00000592561	PDRG1	Q9NUG6	133 aa		12.79	□□□□□ -0.36
PSMD8-208	ENST00000592561	PNMA3	Q9UL41	463 aa		12.79	□□□□□ -0.36
PSMD8-208	ENST00000592561	CASP8AP2	Q9UKL3	1982 aa		12.79	□□□□□ -0.36
PSMD8-208	ENST00000592561	DDX11L8	A8MPP1	907 aa		12.78	□□□□□ -0.36
PSMD8-208	ENST00000592561		K7ELQ4	463 aa	Predicted RBP	12.78	□□□□□ -0.36
PSMD8-208	ENST00000592561	DDAH1	O94760	285 aa		12.78	□□□□□ -0.36
PSMD8-208	ENST00000592561	BMP3	P12645	472 aa		12.78	□□□□□ -0.36
PSMD8-208	ENST00000592561	MCM4	P33991	863 aa		12.78	□□□□□ -0.36
PSMD8-208	ENST00000592561	MCM2	P49736	904 aa		12.78	□□□□□ -0.36
PSMD8-208	ENST00000592561	TROAP	Q12815	778 aa		12.78	□□□□□ -0.36
PSMD8-208	ENST00000592561	FAM83B	Q5T0W9	1011 aa		12.78	□□□□□ -0.36
PSMD8-208	ENST00000592561	CATSPERG	Q6ZRH7	1159 aa		12.78	□□□□□ -0.36
PSMD8-208	ENST00000592561	CATIP	Q7Z7H3	387 aa		12.78	□□□□□ -0.36
PSMD8-208	ENST00000592561	ZNF654	Q8IZM8	581 aa		12.78	□□□□□ -0.36
PSMD8-208	ENST00000592561	BRF1	Q92994	677 aa		12.78	□□□□□ -0.36
PSMD8-208	ENST00000592561	NUP88	Q99567	741 aa	Predicted RBP	12.78	□□□□□ -0.36
PSMD8-208	ENST00000592561	TANGO6	Q9C0B7	1094 aa		12.78	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms