RNA–Protein interactions for RNA: ENST00000592555.1

SAFB-213, Transcript of scaffold attachment factor B, humanhuman

TSL 5

Gene SAFB, Length 1,360 nt, Biotype retained intron, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAFB-213ENST00000592555 USP17L11C9JVI0 530 aa21.48■■□□□ 1.03
SAFB-213ENST00000592555 USP17L18D6R9N7 530 aa21.48■■□□□ 1.03
SAFB-213ENST00000592555 USP17L22D6RA61 530 aa21.48■■□□□ 1.03
SAFB-213ENST00000592555 USP17L17D6RBQ6 530 aa21.48■■□□□ 1.03
SAFB-213ENST00000592555 USP17L19D6RCP7 530 aa21.48■■□□□ 1.03
SAFB-213ENST00000592555 USP17L20D6RJB6 530 aa21.48■■□□□ 1.03
SAFB-213ENST00000592555 VCAM1P19320 739 aa21.48■■□□□ 1.03
SAFB-213ENST00000592555 MAP2K2P36507 400 aa21.48■■□□□ 1.03
SAFB-213ENST00000592555 USP17L24Q0WX57 530 aa21.48■■□□□ 1.03
SAFB-213ENST00000592555 GRM4Q14833 912 aa21.48■■□□□ 1.03
SAFB-213ENST00000592555 ANKRD23Q86SG2 305 aa21.48■■□□□ 1.03
SAFB-213ENST00000592555 FANCBQ8NB91 859 aa21.48■■□□□ 1.03
SAFB-213ENST00000592555 CHURC1Q8WUH1 139 aa21.48■■□□□ 1.03
SAFB-213ENST00000592555 SNX21Q969T3 373 aa21.48■■□□□ 1.03
SAFB-213ENST00000592555 SENP2Q9HC62 589 aa21.48■■□□□ 1.03
SAFB-213ENST00000592555 FEM1BQ9UK73 627 aa21.48■■□□□ 1.03
SAFB-213ENST00000592555 BRPF3Q9ULD4 1205 aa21.48■■□□□ 1.03
SAFB-213ENST00000592555 MYPNQ86TC9 1320 aa21.47■■□□□ 1.03
SAFB-213ENST00000592555 CCL15-CCL14A0A0B4J2E2 113 aa21.47■■□□□ 1.03
SAFB-213ENST00000592555 GOLGA8BA8MQT2 603 aa21.47■■□□□ 1.03
SAFB-213ENST00000592555 RAD21O60216 631 aa21.47■■□□□ 1.03
SAFB-213ENST00000592555 FDX1P10109 184 aa21.47■■□□□ 1.03
SAFB-213ENST00000592555 PDIA3P30101 505 aaKnown RBP21.47■■□□□ 1.03
SAFB-213ENST00000592555 ZNF543Q08ER8 600 aa21.47■■□□□ 1.03
SAFB-213ENST00000592555 ZYXQ15942 572 aaKnown RBP21.47■■□□□ 1.03
SAFB-213ENST00000592555 CCL15Q16663 113 aa21.47■■□□□ 1.03
SAFB-213ENST00000592555 FAM160B2Q86V87 743 aa21.47■■□□□ 1.03
SAFB-213ENST00000592555 NUP133Q8WUM0 1156 aa21.47■■□□□ 1.03
SAFB-213ENST00000592555 PNMA3Q9UL41 463 aa21.47■■□□□ 1.03
SAFB-213ENST00000592555 TM4SF4P48230 202 aa21.46■■□□□ 1.03
SAFB-213ENST00000592555 METAP2P50579 478 aaKnown RBP eCLIP21.46■■□□□ 1.03
SAFB-213ENST00000592555 CYP4F22Q6NT55 531 aa21.46■■□□□ 1.03
SAFB-213ENST00000592555 CPLX2Q6PUV4 134 aaKnown RBP21.46■■□□□ 1.03
SAFB-213ENST00000592555 GADL1Q6ZQY3 521 aa21.46■■□□□ 1.03
SAFB-213ENST00000592555 SLKQ9H2G2 1235 aaPredicted RBP21.46■■□□□ 1.03
SAFB-213ENST00000592555 HOXC10Q9NYD6 342 aa21.46■■□□□ 1.03
SAFB-213ENST00000592555 PALM3A6NDB9 673 aaPredicted RBP21.45■■□□□ 1.02
SAFB-213ENST00000592555 OSBPP22059 807 aa21.45■■□□□ 1.02
SAFB-213ENST00000592555 STAT2P52630 851 aa21.45■■□□□ 1.02
SAFB-213ENST00000592555 MOGSQ13724 837 aa21.45■■□□□ 1.02
SAFB-213ENST00000592555 RTN1Q16799 776 aa21.45■■□□□ 1.02
SAFB-213ENST00000592555 CCDC96Q2M329 555 aa21.45■■□□□ 1.02
SAFB-213ENST00000592555 BTNL9Q6UXG8 535 aa21.45■■□□□ 1.02
SAFB-213ENST00000592555 MICU3Q86XE3 530 aa21.45■■□□□ 1.02
SAFB-213ENST00000592555 SPICE1Q8N0Z3 855 aa21.45■■□□□ 1.02
SAFB-213ENST00000592555 GTF3C2Q8WUA4 911 aaPredicted RBP21.45■■□□□ 1.02
SAFB-213ENST00000592555 RPAP3Q9H6T3 665 aaPredicted RBP21.45■■□□□ 1.02
SAFB-213ENST00000592555 TPCN1Q9ULQ1 816 aa21.45■■□□□ 1.02
SAFB-213ENST00000592555 NAP1L2Q9ULW6 460 aaPredicted RBP21.45■■□□□ 1.02
SAFB-213ENST00000592555 WDR33Q9C0J8 1336 aaKnown RBP21.44■■□□□ 1.02
SAFB-213ENST00000592555 GOLGA8AA7E2F4 631 aa21.44■■□□□ 1.02
SAFB-213ENST00000592555 PFKFB2O60825 505 aa21.44■■□□□ 1.02
SAFB-213ENST00000592555 ALDH1A1P00352 501 aa21.44■■□□□ 1.02
SAFB-213ENST00000592555 CATSPERGQ6ZRH7 1159 aa21.44■■□□□ 1.02
SAFB-213ENST00000592555 MAD2L2Q9UI95 211 aa21.44■■□□□ 1.02
SAFB-213ENST00000592555 LOC285556D6RIA3 1793 aa21.43■■□□□ 1.02
SAFB-213ENST00000592555 KLRF2D3W0D1 207 aa21.43■■□□□ 1.02
SAFB-213ENST00000592555 COG2Q14746 738 aa21.43■■□□□ 1.02
SAFB-213ENST00000592555 KIAA1755Q5JYT7 1200 aa21.43■■□□□ 1.02
SAFB-213ENST00000592555 FAM83BQ5T0W9 1011 aa21.43■■□□□ 1.02
SAFB-213ENST00000592555 PRPF38AQ8NAV1 312 aaKnown RBP21.43■■□□□ 1.02
SAFB-213ENST00000592555 BRI3BPQ8WY22 251 aa21.43■■□□□ 1.02
SAFB-213ENST00000592555 TANGO6Q9C0B7 1094 aa21.43■■□□□ 1.02
SAFB-213ENST00000592555 PNMA2Q9UL42 364 aa21.43■■□□□ 1.02
SAFB-213ENST00000592555 HPS5Q9UPZ3 1129 aa21.43■■□□□ 1.02
SAFB-213ENST00000592555 CDKL5O76039 1030 aa21.42■■□□□ 1.02
SAFB-213ENST00000592555 KIF23Q02241 960 aaPredicted RBP21.42■■□□□ 1.02
SAFB-213ENST00000592555 MKRN3Q13064 507 aaKnown RBP21.42■■□□□ 1.02
SAFB-213ENST00000592555 GPAT2Q6NUI2 795 aa21.42■■□□□ 1.02
SAFB-213ENST00000592555 RBM27Q9P2N5 1060 aaKnown RBP21.42■■□□□ 1.02
SAFB-213ENST00000592555 MTMR7Q9Y216 660 aa21.42■■□□□ 1.02
SAFB-213ENST00000592555 PTPRFP10586 1907 aa21.42■■□□□ 1.02
SAFB-213ENST00000592555 TMEM232C9JQI7 657 aa21.41■■□□□ 1.02
SAFB-213ENST00000592555 IRX3P78415 501 aaPredicted RBP21.41■■□□□ 1.02
SAFB-213ENST00000592555 ME3Q16798 604 aa21.41■■□□□ 1.02
SAFB-213ENST00000592555 LBX2Q6XYB7 198 aa21.41■■□□□ 1.02
SAFB-213ENST00000592555 HSCBQ8IWL3 235 aa21.41■■□□□ 1.02
SAFB-213ENST00000592555 SLF1Q9BQI6 1058 aa21.41■■□□□ 1.02
SAFB-213ENST00000592555 MYL10Q9BUA6 226 aa21.41■■□□□ 1.02
SAFB-213ENST00000592555 SPZ1Q9BXG8 430 aa21.41■■□□□ 1.02
SAFB-213ENST00000592555 ISY1Q9ULR0 285 aaKnown RBP21.41■■□□□ 1.02
SAFB-213ENST00000592555 BTBD19C9JJ37 291 aa21.4■■□□□ 1.02
SAFB-213ENST00000592555 CPLX1O14810 134 aa21.4■■□□□ 1.02
SAFB-213ENST00000592555 FLOT1O75955 427 aa21.4■■□□□ 1.02
SAFB-213ENST00000592555 VEGFBP49765 207 aa21.4■■□□□ 1.02
SAFB-213ENST00000592555 TRAF1Q13077 416 aa21.4■■□□□ 1.02
SAFB-213ENST00000592555 IKQ13123 557 aaPredicted RBP21.4■■□□□ 1.02
SAFB-213ENST00000592555 TREML2Q5T2D2 321 aa21.4■■□□□ 1.02
SAFB-213ENST00000592555 TMTC3Q6ZXV5 915 aa21.4■■□□□ 1.02
SAFB-213ENST00000592555 KCTD1Q719H9 257 aa21.4■■□□□ 1.02
SAFB-213ENST00000592555 IFNL1Q8IU54 200 aa21.4■■□□□ 1.02
SAFB-213ENST00000592555 MB21D1Q8N884 522 aa21.4■■□□□ 1.02
SAFB-213ENST00000592555 GTF3C6Q969F1 213 aa21.4■■□□□ 1.02
SAFB-213ENST00000592555 PDHXO00330 501 aa21.39■■□□□ 1.02
SAFB-213ENST00000592555 GRM1Q13255 1194 aa21.39■■□□□ 1.02
SAFB-213ENST00000592555 BECN1Q14457 450 aa21.39■■□□□ 1.02
SAFB-213ENST00000592555 PARK7Q99497 189 aaKnown RBP21.39■■□□□ 1.02
SAFB-213ENST00000592555 NUP88Q99567 741 aaPredicted RBP21.39■■□□□ 1.02
SAFB-213ENST00000592555 LLPHQ9BRT6 129 aaKnown RBP21.39■■□□□ 1.02
SAFB-213ENST00000592555 RIOX1Q9H6W3 641 aa21.39■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms