RNA–Protein interactions for RNA: ENST00000592533.5

ZNF540-210, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 2 BASIC

Gene ZNF540, Length 3,147 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-210ENST00000592533 CYP2D7A0A087X1C5 515 aa13.14□□□□□ -0.31
ZNF540-210ENST00000592533 KIF5CO60282 957 aa13.14□□□□□ -0.31
ZNF540-210ENST00000592533 SASH3O75995 380 aa13.14□□□□□ -0.31
ZNF540-210ENST00000592533 CASP1P29466 404 aa13.14□□□□□ -0.31
ZNF540-210ENST00000592533 LONP1P36776 959 aaKnown RBP13.14□□□□□ -0.31
ZNF540-210ENST00000592533 KARSQ15046 597 aaKnown RBP13.14□□□□□ -0.31
ZNF540-210ENST00000592533 KRT31Q15323 416 aa13.14□□□□□ -0.31
ZNF540-210ENST00000592533 IL17AQ16552 155 aa13.14□□□□□ -0.31
ZNF540-210ENST00000592533 ZNF658Q5TYW1 1059 aaPredicted RBP13.14□□□□□ -0.31
ZNF540-210ENST00000592533 KLHL10Q6JEL2 608 aa13.14□□□□□ -0.31
ZNF540-210ENST00000592533 C4orf32Q8N8J7 132 aa13.14□□□□□ -0.31
ZNF540-210ENST00000592533 PARD6BQ9BYG5 372 aa13.14□□□□□ -0.31
ZNF540-210ENST00000592533 CDC23Q9UJX2 597 aa13.14□□□□□ -0.31
ZNF540-210ENST00000592533 CTNND2Q9UQB3 1225 aa13.14□□□□□ -0.31
ZNF540-210ENST00000592533 CDK5RAP2Q96SN8 1893 aa13.14□□□□□ -0.31
ZNF540-210ENST00000592533 CCDC66A2RUB6 948 aa13.13□□□□□ -0.31
ZNF540-210ENST00000592533 CASP14P31944 242 aa13.13□□□□□ -0.31
ZNF540-210ENST00000592533 STX17P56962 302 aa13.13□□□□□ -0.31
ZNF540-210ENST00000592533 SLC10A5Q5PT55 438 aa13.13□□□□□ -0.31
ZNF540-210ENST00000592533 CEP112Q8N8E3 955 aa13.13□□□□□ -0.31
ZNF540-210ENST00000592533 ARFGAP3Q9NP61 516 aa13.13□□□□□ -0.31
ZNF540-210ENST00000592533 ARPP21Q9UBL0 812 aaPredicted RBP13.13□□□□□ -0.31
ZNF540-210ENST00000592533 hCG_1642624A0A1W2PR95 340 aa13.13□□□□□ -0.31
ZNF540-210ENST00000592533 POTEB2H3BUK9 544 aa13.13□□□□□ -0.31
ZNF540-210ENST00000592533 CALML3P27482 149 aa13.13□□□□□ -0.31
ZNF540-210ENST00000592533 USP5P45974 858 aa13.13□□□□□ -0.31
ZNF540-210ENST00000592533 FXR1P51114 621 aaKnown RBP eCLIP13.13□□□□□ -0.31
ZNF540-210ENST00000592533 PAK1Q13153 545 aa13.13□□□□□ -0.31
ZNF540-210ENST00000592533 SMYD4Q8IYR2 804 aaPredicted RBP13.13□□□□□ -0.31
ZNF540-210ENST00000592533 MSANTD4Q8NCY6 345 aa13.13□□□□□ -0.31
ZNF540-210ENST00000592533 DCP1AQ9NPI6 582 aaPredicted RBP13.13□□□□□ -0.31
ZNF540-210ENST00000592533 ABHD10Q9NUJ1 306 aa13.13□□□□□ -0.31
ZNF540-210ENST00000592533 RAB21Q9UL25 225 aa13.13□□□□□ -0.31
ZNF540-210ENST00000592533 SPATA31A1Q5TZJ5 1347 aa13.13□□□□□ -0.31
ZNF540-210ENST00000592533 USP17L12C9JPN9 530 aa13.13□□□□□ -0.31
ZNF540-210ENST00000592533 USP17L21D6R901 530 aa13.13□□□□□ -0.31
ZNF540-210ENST00000592533 SEC31AO94979 1220 aaKnown RBP13.13□□□□□ -0.31
ZNF540-210ENST00000592533 TEX35Q5T0J7 233 aa13.13□□□□□ -0.31
ZNF540-210ENST00000592533 ANKS1AQ92625 1134 aa13.13□□□□□ -0.31
ZNF540-210ENST00000592533 FUT8Q9BYC5 575 aa13.13□□□□□ -0.31
ZNF540-210ENST00000592533 COPB1P53618 953 aaKnown RBP13.12□□□□□ -0.31
ZNF540-210ENST00000592533 CHMP4BP1P59074 171 aa13.12□□□□□ -0.31
ZNF540-210ENST00000592533 TCP11X2Q5H9J9 407 aa13.12□□□□□ -0.31
ZNF540-210ENST00000592533 C3orf67Q6ZVT6 689 aa13.12□□□□□ -0.31
ZNF540-210ENST00000592533 CRNKL1Q9BZJ0 848 aaKnown RBP13.12□□□□□ -0.31
ZNF540-210ENST00000592533 ROBO3Q96MS0 1386 aa13.12□□□□□ -0.31
ZNF540-210ENST00000592533 M0R2N6 131 aa13.12□□□□□ -0.31
ZNF540-210ENST00000592533 MAP2K7O14733 419 aa13.12□□□□□ -0.31
ZNF540-210ENST00000592533 ADAMTS2O95450 1211 aa13.12□□□□□ -0.31
ZNF540-210ENST00000592533 MYL1P05976 194 aa13.12□□□□□ -0.31
ZNF540-210ENST00000592533 ERFEQ4G0M1 354 aa13.12□□□□□ -0.31
ZNF540-210ENST00000592533 RCSD1Q6JBY9 416 aa13.12□□□□□ -0.31
ZNF540-210ENST00000592533 IRX2Q9BZI1 471 aaPredicted RBP13.12□□□□□ -0.31
ZNF540-210ENST00000592533 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.12□□□□□ -0.31
ZNF540-210ENST00000592533 DDX60LQ5H9U9 1706 aaKnown RBP13.12□□□□□ -0.31
ZNF540-210ENST00000592533 KIF5BP33176 963 aa13.11□□□□□ -0.31
ZNF540-210ENST00000592533 ERVK-24P63145 666 aa13.11□□□□□ -0.31
ZNF540-210ENST00000592533 MECOMQ03112 1051 aa13.11□□□□□ -0.31
ZNF540-210ENST00000592533 CYP26C1Q6V0L0 522 aa13.11□□□□□ -0.31
ZNF540-210ENST00000592533 PIK3AP1Q6ZUJ8 805 aa13.11□□□□□ -0.31
ZNF540-210ENST00000592533 LZTFL1Q9NQ48 299 aa13.11□□□□□ -0.31
ZNF540-210ENST00000592533 RPN1P04843 607 aaKnown RBP13.11□□□□□ -0.31
ZNF540-210ENST00000592533 NLRP5P59047 1200 aa13.11□□□□□ -0.31
ZNF540-210ENST00000592533 KCNB1Q14721 858 aa13.11□□□□□ -0.31
ZNF540-210ENST00000592533 DDB1Q16531 1140 aa13.11□□□□□ -0.31
ZNF540-210ENST00000592533 RRAGBQ5VZM2 374 aa13.11□□□□□ -0.31
ZNF540-210ENST00000592533 DAGLBQ8NCG7 672 aa13.11□□□□□ -0.31
ZNF540-210ENST00000592533 WTIPA6NIX2 430 aaPredicted RBP13.11□□□□□ -0.31
ZNF540-210ENST00000592533 KCNJ18B7U540 433 aa13.11□□□□□ -0.31
ZNF540-210ENST00000592533 H7C1D1 291 aa13.11□□□□□ -0.31
ZNF540-210ENST00000592533 GTF2E1P29083 439 aaPredicted RBP13.11□□□□□ -0.31
ZNF540-210ENST00000592533 ARHGAP25P42331 645 aa13.11□□□□□ -0.31
ZNF540-210ENST00000592533 KCNJ12Q14500 433 aa13.11□□□□□ -0.31
ZNF540-210ENST00000592533 ANKRD20A12PQ8NF67 263 aa13.11□□□□□ -0.31
ZNF540-210ENST00000592533 NELFBQ8WX92 580 aa13.11□□□□□ -0.31
ZNF540-210ENST00000592533 SMARCC1Q92922 1105 aaPredicted RBP13.11□□□□□ -0.31
ZNF540-210ENST00000592533 EPC1Q9H2F5 836 aa13.11□□□□□ -0.31
ZNF540-210ENST00000592533 ANKZF1Q9H8Y5 726 aa13.11□□□□□ -0.31
ZNF540-210ENST00000592533 A0A1W2PQC6 194 aa13.1□□□□□ -0.31
ZNF540-210ENST00000592533 CTAGE9A4FU28 777 aa13.1□□□□□ -0.31
ZNF540-210ENST00000592533 N4BP3O15049 544 aa13.1□□□□□ -0.31
ZNF540-210ENST00000592533 MARCH10Q8NA82 808 aaPredicted RBP13.1□□□□□ -0.31
ZNF540-210ENST00000592533 IRS2Q9Y4H2 1338 aa13.1□□□□□ -0.31
ZNF540-210ENST00000592533 A0A0U1RQJ8 604 aa13.1□□□□□ -0.31
ZNF540-210ENST00000592533 NMT2O60551 498 aa13.1□□□□□ -0.31
ZNF540-210ENST00000592533 WHAMMP3Q1A5X7 153 aa13.1□□□□□ -0.31
ZNF540-210ENST00000592533 ZNF662Q6ZS27 426 aa13.1□□□□□ -0.31
ZNF540-210ENST00000592533 DGKHQ86XP1 1220 aa13.1□□□□□ -0.31
ZNF540-210ENST00000592533 BLIDQ8IZY5 108 aa13.1□□□□□ -0.31
ZNF540-210ENST00000592533 ADSSL1Q8N142 457 aa13.1□□□□□ -0.31
ZNF540-210ENST00000592533 ATRIPQ8WXE1 791 aa13.1□□□□□ -0.31
ZNF540-210ENST00000592533 BLZF1Q9H2G9 400 aa13.1□□□□□ -0.31
ZNF540-210ENST00000592533 PCDHA4Q9UN74 947 aa13.1□□□□□ -0.31
ZNF540-210ENST00000592533 MCM7P33993 719 aa13.09□□□□□ -0.31
ZNF540-210ENST00000592533 CCT6AP40227 531 aaKnown RBP13.09□□□□□ -0.31
ZNF540-210ENST00000592533 SMC1AQ14683 1233 aaKnown RBP13.09□□□□□ -0.31
ZNF540-210ENST00000592533 LONRF2Q1L5Z9 754 aa13.09□□□□□ -0.31
ZNF540-210ENST00000592533 GALNT17Q6IS24 598 aa13.09□□□□□ -0.31
ZNF540-210ENST00000592533 CPLX3Q8WVH0 158 aa13.09□□□□□ -0.31
ZNF540-210ENST00000592533 DISC1Q9NRI5 854 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms