RNA–Protein interactions for RNA: ENST00000589219.1

VPS25-202, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 914 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-202ENST00000589219 C11orf57Q6ZUT1 292 aaPredicted RBP11.43□□□□□ -0.58
VPS25-202ENST00000589219 STK11IPQ8N1F8 1099 aa11.43□□□□□ -0.58
VPS25-202ENST00000589219 TRPM4Q8TD43 1214 aa11.43□□□□□ -0.58
VPS25-202ENST00000589219 ZNF287Q9HBT7 754 aa11.43□□□□□ -0.58
VPS25-202ENST00000589219 CD209Q9NNX6 404 aa11.43□□□□□ -0.58
VPS25-202ENST00000589219 MCM9Q9NXL9 1143 aa11.43□□□□□ -0.58
VPS25-202ENST00000589219 KIAA1468Q9P260 1216 aa11.43□□□□□ -0.58
VPS25-202ENST00000589219 TSPY2A6NKD2 308 aa11.42□□□□□ -0.58
VPS25-202ENST00000589219 WDHD1O75717 1129 aaPredicted RBP11.42□□□□□ -0.58
VPS25-202ENST00000589219 ZNF202O95125 648 aa11.42□□□□□ -0.58
VPS25-202ENST00000589219 VIL1P09327 827 aaKnown RBP11.42□□□□□ -0.58
VPS25-202ENST00000589219 GUCY1A2P33402 732 aa11.42□□□□□ -0.58
VPS25-202ENST00000589219 LBX1P52954 281 aa11.42□□□□□ -0.58
VPS25-202ENST00000589219 TERF1P54274 439 aa11.42□□□□□ -0.58
VPS25-202ENST00000589219 NLRP12P59046 1061 aa11.42□□□□□ -0.58
VPS25-202ENST00000589219 TPM4P67936 248 aa11.42□□□□□ -0.58
VPS25-202ENST00000589219 GRM1Q13255 1194 aa11.42□□□□□ -0.58
VPS25-202ENST00000589219 CYP4F22Q6NT55 531 aa11.42□□□□□ -0.58
VPS25-202ENST00000589219 SAMD7Q7Z3H4 446 aa11.42□□□□□ -0.58
VPS25-202ENST00000589219 SAPCD2Q86UD0 394 aa11.42□□□□□ -0.58
VPS25-202ENST00000589219 FAM177A1Q8N128 213 aaPredicted RBP11.42□□□□□ -0.58
VPS25-202ENST00000589219 ZNF579Q8NAF0 562 aaKnown RBP11.42□□□□□ -0.58
VPS25-202ENST00000589219 PIBF1Q8WXW3 757 aa11.42□□□□□ -0.58
VPS25-202ENST00000589219 ANKS1AQ92625 1134 aa11.42□□□□□ -0.58
VPS25-202ENST00000589219 DCPSQ96C86 337 aaKnown RBP11.42□□□□□ -0.58
VPS25-202ENST00000589219 PHF20Q9BVI0 1012 aa11.42□□□□□ -0.58
VPS25-202ENST00000589219 ZNF408Q9H9D4 720 aa11.42□□□□□ -0.58
VPS25-202ENST00000589219 TCP11L1Q9NUJ3 509 aa11.42□□□□□ -0.58
VPS25-202ENST00000589219 FAM13BQ9NYF5 915 aa11.42□□□□□ -0.58
VPS25-202ENST00000589219 HOOK1Q9UJC3 728 aaKnown RBP11.42□□□□□ -0.58
VPS25-202ENST00000589219 SUGT1Q9Y2Z0 365 aa11.42□□□□□ -0.58
VPS25-202ENST00000589219 PSME4Q14997 1843 aa11.42□□□□□ -0.58
VPS25-202ENST00000589219 GAKO14976 1311 aa11.41□□□□□ -0.58
VPS25-202ENST00000589219 FAM205AQ6ZU69 1335 aa11.41□□□□□ -0.58
VPS25-202ENST00000589219 BTBD18B2RXH4 712 aa11.41□□□□□ -0.58
VPS25-202ENST00000589219 AP5Z1O43299 807 aa11.41□□□□□ -0.58
VPS25-202ENST00000589219 PRDM1O75626 825 aa11.41□□□□□ -0.58
VPS25-202ENST00000589219 CYP2D6P10635 497 aa11.41□□□□□ -0.58
VPS25-202ENST00000589219 MARCKSP29966 332 aaPredicted RBP11.41□□□□□ -0.58
VPS25-202ENST00000589219 GNAQP50148 359 aa11.41□□□□□ -0.58
VPS25-202ENST00000589219 TBC1D10BQ4KMP7 808 aaPredicted RBP11.41□□□□□ -0.58
VPS25-202ENST00000589219 SHC4Q6S5L8 630 aa11.41□□□□□ -0.58
VPS25-202ENST00000589219 KRT26Q7Z3Y9 468 aa11.41□□□□□ -0.58
VPS25-202ENST00000589219 DGKHQ86XP1 1220 aa11.41□□□□□ -0.58
VPS25-202ENST00000589219 MRFAP1L1Q96HT8 127 aa11.41□□□□□ -0.58
VPS25-202ENST00000589219 NAP1L5Q96NT1 182 aaPredicted RBP11.41□□□□□ -0.58
VPS25-202ENST00000589219 TRIM5Q9C035 493 aa11.41□□□□□ -0.58
VPS25-202ENST00000589219 KAT14Q9H8E8 782 aa11.41□□□□□ -0.58
VPS25-202ENST00000589219 KCNJ14Q9UNX9 436 aa11.41□□□□□ -0.58
VPS25-202ENST00000589219 SCN9AQ15858 1988 aa11.41□□□□□ -0.58
VPS25-202ENST00000589219 GPR75-ASB3A0A0A6YYF3 556 aa11.4□□□□□ -0.58
VPS25-202ENST00000589219 SHTN1A0MZ66 631 aa11.4□□□□□ -0.58
VPS25-202ENST00000589219 TRIM75PA6NK02 468 aa11.4□□□□□ -0.58
VPS25-202ENST00000589219 CA12O43570 354 aa11.4□□□□□ -0.58
VPS25-202ENST00000589219 PLEKHA8P1O95397 391 aa11.4□□□□□ -0.58
VPS25-202ENST00000589219 HSPA8P11142 646 aaKnown RBP11.4□□□□□ -0.58
VPS25-202ENST00000589219 PTPREP23469 700 aa11.4□□□□□ -0.58
VPS25-202ENST00000589219 TRAPPC10P48553 1259 aa11.4□□□□□ -0.58
VPS25-202ENST00000589219 PKN1Q16512 942 aa11.4□□□□□ -0.58
VPS25-202ENST00000589219 PODNQ7Z5L7 613 aa11.4□□□□□ -0.58
VPS25-202ENST00000589219 DHX40Q8IX18 779 aaKnown RBP11.4□□□□□ -0.58
VPS25-202ENST00000589219 AGBL3Q8NEM8 1001 aa11.4□□□□□ -0.58
VPS25-202ENST00000589219 SH3RF3Q8TEJ3 882 aaPredicted RBP11.4□□□□□ -0.58
VPS25-202ENST00000589219 FAM163AQ96GL9 167 aaPredicted RBP11.4□□□□□ -0.58
VPS25-202ENST00000589219 CCDC34Q96HJ3 373 aa11.4□□□□□ -0.58
VPS25-202ENST00000589219 KCNQ5Q9NR82 932 aa11.4□□□□□ -0.58
VPS25-202ENST00000589219 TUBE1Q9UJT0 475 aa11.4□□□□□ -0.58
VPS25-202ENST00000589219 FBXO2Q9UK22 296 aaPredicted RBP11.4□□□□□ -0.58
VPS25-202ENST00000589219 JAG2Q9Y219 1238 aa11.4□□□□□ -0.58
VPS25-202ENST00000589219 SMTNL1A8MU46 457 aa11.39□□□□□ -0.59
VPS25-202ENST00000589219 UBE2Q2LH0YL09 131 aa11.39□□□□□ -0.59
VPS25-202ENST00000589219 SMIM22K7EJ46 135 aa11.39□□□□□ -0.59
VPS25-202ENST00000589219 IKBKBO14920 756 aa11.39□□□□□ -0.59
VPS25-202ENST00000589219 MYO1BO43795 1136 aa11.39□□□□□ -0.59
VPS25-202ENST00000589219 NEMFO60524 1076 aa11.39□□□□□ -0.59
VPS25-202ENST00000589219 TPM2P07951 284 aa11.39□□□□□ -0.59
VPS25-202ENST00000589219 USP17L8P0C7I0 530 aa11.39□□□□□ -0.59
VPS25-202ENST00000589219 CALML3P27482 149 aa11.39□□□□□ -0.59
VPS25-202ENST00000589219 BTDP43251 543 aa11.39□□□□□ -0.59
VPS25-202ENST00000589219 TOB1P50616 345 aaPredicted RBP11.39□□□□□ -0.59
VPS25-202ENST00000589219 DHX8Q14562 1220 aaKnown RBP11.39□□□□□ -0.59
VPS25-202ENST00000589219 GRM4Q14833 912 aa11.39□□□□□ -0.59
VPS25-202ENST00000589219 KIF4BQ2VIQ3 1234 aa11.39□□□□□ -0.59
VPS25-202ENST00000589219 RBM26Q5T8P6 1007 aaKnown RBP11.39□□□□□ -0.59
VPS25-202ENST00000589219 RSBN1LQ6PCB5 846 aaPredicted RBP11.39□□□□□ -0.59
VPS25-202ENST00000589219 KRBA2Q6ZNG9 492 aa11.39□□□□□ -0.59
VPS25-202ENST00000589219 SULF1Q8IWU6 871 aa11.39□□□□□ -0.59
VPS25-202ENST00000589219 AOPEPQ8N6M6 819 aa11.39□□□□□ -0.59
VPS25-202ENST00000589219 C2orf69Q8N8R5 385 aa11.39□□□□□ -0.59
VPS25-202ENST00000589219 LZTS2Q9BRK4 669 aa11.39□□□□□ -0.59
VPS25-202ENST00000589219 COA1Q9GZY4 146 aa11.39□□□□□ -0.59
VPS25-202ENST00000589219 SH3GLB2Q9NR46 395 aa11.39□□□□□ -0.59
VPS25-202ENST00000589219 VPS54Q9P1Q0 977 aa11.39□□□□□ -0.59
VPS25-202ENST00000589219 SRPRBQ9Y5M8 271 aaKnown RBP11.39□□□□□ -0.59
VPS25-202ENST00000589219 PLIN4Q96Q06 1357 aa11.39□□□□□ -0.59
VPS25-202ENST00000589219 USP17L3A6NCW0 530 aa11.38□□□□□ -0.59
VPS25-202ENST00000589219 USP17L4A6NCW7 530 aa11.38□□□□□ -0.59
VPS25-202ENST00000589219 AOC2O75106 756 aa11.38□□□□□ -0.59
VPS25-202ENST00000589219 SCG2P13521 617 aa11.38□□□□□ -0.59
VPS25-202ENST00000589219 HUNKP57058 714 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms