RNA–Protein interactions for RNA: ENST00000588507.5

TPM4-210, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-210ENST00000588507 SCLYQ96I15 445 aa8.86□□□□□ -0.99
TPM4-210ENST00000588507 RTKNQ9BST9 563 aa8.86□□□□□ -0.99
TPM4-210ENST00000588507 NOC4LQ9BVI4 516 aaKnown RBP8.86□□□□□ -0.99
TPM4-210ENST00000588507 USP40Q9NVE5 1235 aa8.86□□□□□ -0.99
TPM4-210ENST00000588507 ANGPTL2Q9UKU9 493 aa8.86□□□□□ -0.99
TPM4-210ENST00000588507 DOCK2Q92608 1830 aa8.85□□□□□ -0.99
TPM4-210ENST00000588507 C19orf81C9J6K1 198 aa8.85□□□□□ -0.99
TPM4-210ENST00000588507 ENTPD3O75355 529 aa8.85□□□□□ -0.99
TPM4-210ENST00000588507 FRAT2O75474 233 aaPredicted RBP8.85□□□□□ -0.99
TPM4-210ENST00000588507 PROS1P07225 676 aa8.85□□□□□ -0.99
TPM4-210ENST00000588507 AKR1A1P14550 325 aa8.85□□□□□ -0.99
TPM4-210ENST00000588507 HDGFL1Q5TGJ6 251 aa8.85□□□□□ -0.99
TPM4-210ENST00000588507 DEFB128Q7Z7B8 93 aa8.85□□□□□ -0.99
TPM4-210ENST00000588507 RPAINQ86UA6 219 aa8.85□□□□□ -0.99
TPM4-210ENST00000588507 PCSK9Q8NBP7 692 aaKnown RBP8.85□□□□□ -0.99
TPM4-210ENST00000588507 WDR18Q9BV38 432 aa8.85□□□□□ -0.99
TPM4-210ENST00000588507 BABAM1Q9NWV8 329 aa8.85□□□□□ -0.99
TPM4-210ENST00000588507 CDV3Q9UKY7 258 aaKnown RBP8.85□□□□□ -0.99
TPM4-210ENST00000588507 IQSEC3Q9UPP2 1182 aaPredicted RBP8.85□□□□□ -0.99
TPM4-210ENST00000588507 SYNRGQ9UMZ2 1314 aa8.84□□□□□ -0.99
TPM4-210ENST00000588507 ANKRD18BA2A2Z9 1011 aa8.84□□□□□ -0.99
TPM4-210ENST00000588507 DDTLA6NHG4 134 aaPredicted RBP8.84□□□□□ -0.99
TPM4-210ENST00000588507 PRR5-ARHGAP8B1AHC4 643 aa8.84□□□□□ -0.99
TPM4-210ENST00000588507 TBC1D12O60347 775 aa8.84□□□□□ -0.99
TPM4-210ENST00000588507 COBLO75128 1261 aa8.84□□□□□ -0.99
TPM4-210ENST00000588507 NEFMP07197 916 aa8.84□□□□□ -0.99
TPM4-210ENST00000588507 ASGR1P07306 291 aa8.84□□□□□ -0.99
TPM4-210ENST00000588507 ICAM3P32942 547 aa8.84□□□□□ -0.99
TPM4-210ENST00000588507 RGS3P49796 1198 aa8.84□□□□□ -0.99
TPM4-210ENST00000588507 ARHGAP8P85298 464 aa8.84□□□□□ -0.99
TPM4-210ENST00000588507 PTPN21Q16825 1174 aa8.84□□□□□ -0.99
TPM4-210ENST00000588507 ASTLQ6HA08 431 aaPredicted RBP8.84□□□□□ -0.99
TPM4-210ENST00000588507 PRR23BQ6ZRT6 265 aa8.84□□□□□ -0.99
TPM4-210ENST00000588507 FBXO22Q8NEZ5 403 aa8.84□□□□□ -0.99
TPM4-210ENST00000588507 LENG1Q96BZ8 264 aaPredicted RBP8.84□□□□□ -0.99
TPM4-210ENST00000588507 ZBED2Q9BTP6 218 aa8.84□□□□□ -0.99
TPM4-210ENST00000588507 NSUN3Q9H649 340 aaKnown RBP8.84□□□□□ -0.99
TPM4-210ENST00000588507 ROBO3Q96MS0 1386 aa8.84□□□□□ -0.99
TPM4-210ENST00000588507 ASPMQ8IZT6 3477 aa8.84□□□□□ -1
TPM4-210ENST00000588507 CSF1RP07333 972 aa8.83□□□□□ -1
TPM4-210ENST00000588507 CST5P28325 142 aaPredicted RBP8.83□□□□□ -1
TPM4-210ENST00000588507 CAP2P40123 477 aa8.83□□□□□ -1
TPM4-210ENST00000588507 UBE4AQ14139 1066 aa8.83□□□□□ -1
TPM4-210ENST00000588507 ANGPT1Q15389 498 aa8.83□□□□□ -1
TPM4-210ENST00000588507 VPS37DQ86XT2 251 aa8.83□□□□□ -1
TPM4-210ENST00000588507 CRACR2BQ8N4Y2 399 aaPredicted RBP8.83□□□□□ -1
TPM4-210ENST00000588507 MAML3Q96JK9 1138 aa8.83□□□□□ -1
TPM4-210ENST00000588507 CFAP53Q96M91 514 aa8.83□□□□□ -1
TPM4-210ENST00000588507 AGBL1Q96MI9 1066 aa8.83□□□□□ -1
TPM4-210ENST00000588507 METTL22Q9BUU2 404 aaPredicted RBP8.83□□□□□ -1
TPM4-210ENST00000588507 IDI2Q9BXS1 227 aa8.83□□□□□ -1
TPM4-210ENST00000588507 CD207Q9UJ71 328 aa8.83□□□□□ -1
TPM4-210ENST00000588507 ZMIZ1Q9ULJ6 1067 aa8.83□□□□□ -1
TPM4-210ENST00000588507 LHX6Q9UPM6 363 aa8.83□□□□□ -1
TPM4-210ENST00000588507 LINC01553A4QN01 128 aa8.82□□□□□ -1
TPM4-210ENST00000588507 KCNJ6P48051 423 aa8.82□□□□□ -1
TPM4-210ENST00000588507 DLX2Q07687 328 aaPredicted RBP8.82□□□□□ -1
TPM4-210ENST00000588507 CTC1Q2NKJ3 1217 aa8.82□□□□□ -1
TPM4-210ENST00000588507 PPM1JQ5JR12 505 aa8.82□□□□□ -1
TPM4-210ENST00000588507 GPR161Q8N6U8 529 aaKnown RBP8.82□□□□□ -1
TPM4-210ENST00000588507 BTBD7Q9P203 1132 aa8.82□□□□□ -1
TPM4-210ENST00000588507 MYADML2A6NDP7 307 aa8.81□□□□□ -1
TPM4-210ENST00000588507 USP17L10C9JJH3 530 aa8.81□□□□□ -1
TPM4-210ENST00000588507 TAF4O00268 1085 aa8.81□□□□□ -1
TPM4-210ENST00000588507 ZNF865P0CJ78 1059 aaPredicted RBP8.81□□□□□ -1
TPM4-210ENST00000588507 TAL1P17542 331 aaPredicted RBP8.81□□□□□ -1
TPM4-210ENST00000588507 CLCN5P51795 746 aa8.81□□□□□ -1
TPM4-210ENST00000588507 KRT24Q2M2I5 525 aa8.81□□□□□ -1
TPM4-210ENST00000588507 CC2D1BQ5T0F9 858 aaKnown RBP8.81□□□□□ -1
TPM4-210ENST00000588507 FBXO33Q7Z6M2 555 aa8.81□□□□□ -1
TPM4-210ENST00000588507 ZBTB33Q86T24 672 aa8.81□□□□□ -1
TPM4-210ENST00000588507 SLC43A3Q8NBI5 491 aa8.81□□□□□ -1
TPM4-210ENST00000588507 CRBNQ96SW2 442 aa8.81□□□□□ -1
TPM4-210ENST00000588507 RAD9AQ99638 391 aa8.81□□□□□ -1
TPM4-210ENST00000588507 PLA2G12BQ9BX93 195 aa8.81□□□□□ -1
TPM4-210ENST00000588507 ANKFY1Q9P2R3 1169 aa8.81□□□□□ -1
TPM4-210ENST00000588507 SIP14410 1827 aa8.8□□□□□ -1
TPM4-210ENST00000588507 ZNF236Q9UL36 1845 aa8.8□□□□□ -1
TPM4-210ENST00000588507 DLG5Q8TDM6 1919 aa8.8□□□□□ -1
TPM4-210ENST00000588507 FAM196BA6NMK8 535 aa8.8□□□□□ -1
TPM4-210ENST00000588507 USP17L15C9J2P7 530 aa8.8□□□□□ -1
TPM4-210ENST00000588507 USP17L13C9JLJ4 530 aa8.8□□□□□ -1
TPM4-210ENST00000588507 USP17L11C9JVI0 530 aa8.8□□□□□ -1
TPM4-210ENST00000588507 USP17L18D6R9N7 530 aa8.8□□□□□ -1
TPM4-210ENST00000588507 USP17L22D6RA61 530 aa8.8□□□□□ -1
TPM4-210ENST00000588507 USP17L17D6RBQ6 530 aa8.8□□□□□ -1
TPM4-210ENST00000588507 USP17L19D6RCP7 530 aa8.8□□□□□ -1
TPM4-210ENST00000588507 USP17L20D6RJB6 530 aa8.8□□□□□ -1
TPM4-210ENST00000588507 BAIAP3O94812 1187 aa8.8□□□□□ -1
TPM4-210ENST00000588507 C6orf222P0C671 652 aaPredicted RBP8.8□□□□□ -1
TPM4-210ENST00000588507 RFC2P35250 354 aa8.8□□□□□ -1
TPM4-210ENST00000588507 RING1Q06587 406 aa8.8□□□□□ -1
TPM4-210ENST00000588507 USP17L24Q0WX57 530 aa8.8□□□□□ -1
TPM4-210ENST00000588507 CRIPAKQ8N1N5 446 aa8.8□□□□□ -1
TPM4-210ENST00000588507 SHCBP1Q8NEM2 672 aa8.8□□□□□ -1
TPM4-210ENST00000588507 HNRNPABQ99729 332 aaKnown RBP8.8□□□□□ -1
TPM4-210ENST00000588507 FTOQ9C0B1 505 aaKnown RBP eCLIP8.8□□□□□ -1
TPM4-210ENST00000588507 SPC25Q9HBM1 224 aa8.8□□□□□ -1
TPM4-210ENST00000588507 FAM184BQ9ULE4 1060 aa8.8□□□□□ -1
TPM4-210ENST00000588507 R4GN57 208 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms