RNA–Protein interactions for RNA: ENST00000587718.5

CAPNS1-204, Transcript of calpain small subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CAPNS1, Length 1,558 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-204ENST00000587718 LDHCP07864 332 aa29.39■■■□□ 2.3
CAPNS1-204ENST00000587718 GSTO1P78417 241 aa29.39■■■□□ 2.3
CAPNS1-204ENST00000587718 MOGSQ13724 837 aa29.39■■■□□ 2.3
CAPNS1-204ENST00000587718 EFCC1Q9HA90 598 aa29.39■■■□□ 2.3
CAPNS1-204ENST00000587718 POLR3EQ9NVU0 708 aa29.39■■■□□ 2.3
CAPNS1-204ENST00000587718 SLURP2P0DP57 97 aa29.39■■■□□ 2.29
CAPNS1-204ENST00000587718 NT5C2P49902 561 aa29.39■■■□□ 2.29
CAPNS1-204ENST00000587718 SART3Q15020 963 aaKnown RBP29.39■■■□□ 2.29
CAPNS1-204ENST00000587718 ARMT1Q9H993 441 aa29.39■■■□□ 2.29
CAPNS1-204ENST00000587718 ZKSCAN5Q9Y2L8 839 aa29.39■■■□□ 2.29
CAPNS1-204ENST00000587718 ZBTB43O43298 467 aa29.38■■■□□ 2.29
CAPNS1-204ENST00000587718 ZNF500O60304 480 aaPredicted RBP29.38■■■□□ 2.29
CAPNS1-204ENST00000587718 PICALMQ13492 652 aa29.38■■■□□ 2.29
CAPNS1-204ENST00000587718 PPP2R5BQ15173 497 aa29.38■■■□□ 2.29
CAPNS1-204ENST00000587718 MFSD6Q6ZSS7 791 aa29.38■■■□□ 2.29
CAPNS1-204ENST00000587718 KCNG4Q8TDN1 519 aa29.38■■■□□ 2.29
CAPNS1-204ENST00000587718 USP28Q96RU2 1077 aa29.38■■■□□ 2.29
CAPNS1-204ENST00000587718 LY9Q9HBG7 655 aa29.38■■■□□ 2.29
CAPNS1-204ENST00000587718 RAI14Q9P0K7 980 aa29.38■■■□□ 2.29
CAPNS1-204ENST00000587718 B4E1Z4 1266 aa29.37■■■□□ 2.29
CAPNS1-204ENST00000587718 TYRO3Q06418 890 aa29.37■■■□□ 2.29
CAPNS1-204ENST00000587718 ZSCAN29Q8IWY8 852 aaPredicted RBP29.37■■■□□ 2.29
CAPNS1-204ENST00000587718 SLC4A4Q9Y6R1 1079 aa29.37■■■□□ 2.29
CAPNS1-204ENST00000587718 NEDD4P46934 1319 aa29.37■■■□□ 2.29
CAPNS1-204ENST00000587718 TNRC18O15417 2968 aaPredicted RBP29.36■■■□□ 2.29
CAPNS1-204ENST00000587718 TMEM67Q5HYA8 995 aa29.36■■■□□ 2.29
CAPNS1-204ENST00000587718 ANKRD23Q86SG2 305 aa29.36■■■□□ 2.29
CAPNS1-204ENST00000587718 WASF1Q92558 559 aa29.36■■■□□ 2.29
CAPNS1-204ENST00000587718 TDO2P48775 406 aa29.35■■■□□ 2.29
CAPNS1-204ENST00000587718 SYNE3Q6ZMZ3 975 aa29.35■■■□□ 2.29
CAPNS1-204ENST00000587718 CCDC73Q6ZRK6 1079 aa29.35■■■□□ 2.29
CAPNS1-204ENST00000587718 SCYL3Q8IZE3 742 aa29.35■■■□□ 2.29
CAPNS1-204ENST00000587718 LCORLQ8N3X6 602 aa29.35■■■□□ 2.29
CAPNS1-204ENST00000587718 TPM3P06753 285 aa29.35■■■□□ 2.29
CAPNS1-204ENST00000587718 CYP7A1P22680 504 aa29.35■■■□□ 2.29
CAPNS1-204ENST00000587718 ADALQ6DHV7 355 aa29.35■■■□□ 2.29
CAPNS1-204ENST00000587718 MAGEB6P1A0A0J9YX57 407 aa29.34■■■□□ 2.29
CAPNS1-204ENST00000587718 CXCL11O14625 94 aa29.34■■■□□ 2.29
CAPNS1-204ENST00000587718 TBC1D12O60347 775 aa29.34■■■□□ 2.29
CAPNS1-204ENST00000587718 USP25Q9UHP3 1055 aa29.34■■■□□ 2.29
CAPNS1-204ENST00000587718 NR1I2O75469 434 aa29.33■■■□□ 2.29
CAPNS1-204ENST00000587718 PTPRAP18433 802 aa29.33■■■□□ 2.29
CAPNS1-204ENST00000587718 FAM160A1Q05DH4 1040 aa29.33■■■□□ 2.29
CAPNS1-204ENST00000587718 SASS6Q6UVJ0 657 aa29.33■■■□□ 2.29
CAPNS1-204ENST00000587718 C17orf99Q6UX52 265 aa29.33■■■□□ 2.29
CAPNS1-204ENST00000587718 MRVI1Q9Y6F6 885 aa29.33■■■□□ 2.29
CAPNS1-204ENST00000587718 CCDC196A0A1B0GTZ2 297 aa29.32■■■□□ 2.28
CAPNS1-204ENST00000587718 IFIT3O14879 490 aaKnown RBP29.32■■■□□ 2.28
CAPNS1-204ENST00000587718 CTNND1O60716 968 aaKnown RBP29.32■■■□□ 2.28
CAPNS1-204ENST00000587718 MYSM1Q5VVJ2 828 aa29.32■■■□□ 2.28
CAPNS1-204ENST00000587718 CCAR1Q8IX12 1150 aaKnown RBP29.32■■■□□ 2.28
CAPNS1-204ENST00000587718 ZSWIM5Q9P217 1185 aa29.32■■■□□ 2.28
CAPNS1-204ENST00000587718 SLC12A7Q9Y666 1083 aa29.32■■■□□ 2.28
CAPNS1-204ENST00000587718 ZHX2Q9Y6X8 837 aa29.32■■■□□ 2.28
CAPNS1-204ENST00000587718 MAST2Q6P0Q8 1798 aa29.32■■■□□ 2.28
CAPNS1-204ENST00000587718 CCDC69A6NI79 296 aa29.31■■■□□ 2.28
CAPNS1-204ENST00000587718 GOLGA8AA7E2F4 631 aa29.31■■■□□ 2.28
CAPNS1-204ENST00000587718 PDHXO00330 501 aa29.31■■■□□ 2.28
CAPNS1-204ENST00000587718 COL2A1P02458 1487 aaPredicted RBP29.31■■■□□ 2.28
CAPNS1-204ENST00000587718 IFNAR1P17181 557 aa29.31■■■□□ 2.28
CAPNS1-204ENST00000587718 NTRK3Q16288 839 aa29.31■■■□□ 2.28
CAPNS1-204ENST00000587718 GPAT2Q6NUI2 795 aa29.31■■■□□ 2.28
CAPNS1-204ENST00000587718 LINC00301Q8NCQ3 95 aa29.31■■■□□ 2.28
CAPNS1-204ENST00000587718 ENGASEQ8NFI3 743 aa29.31■■■□□ 2.28
CAPNS1-204ENST00000587718 ARMC5Q96C12 935 aa29.31■■■□□ 2.28
CAPNS1-204ENST00000587718 AFG3L2Q9Y4W6 797 aa29.31■■■□□ 2.28
CAPNS1-204ENST00000587718 ADGRA2Q96PE1 1338 aa29.31■■■□□ 2.28
CAPNS1-204ENST00000587718 ERICH2A1L162 156 aa29.3■■■□□ 2.28
CAPNS1-204ENST00000587718 ARHGEF6Q15052 776 aa29.3■■■□□ 2.28
CAPNS1-204ENST00000587718 NFXL1Q6ZNB6 911 aa29.3■■■□□ 2.28
CAPNS1-204ENST00000587718 RIOK1Q9BRS2 568 aaKnown RBP29.3■■■□□ 2.28
CAPNS1-204ENST00000587718 OSBPL5Q9H0X9 879 aaPredicted RBP29.3■■■□□ 2.28
CAPNS1-204ENST00000587718 PPP4CP60510 307 aa29.3■■■□□ 2.28
CAPNS1-204ENST00000587718 LACTBP83111 547 aaPredicted RBP29.3■■■□□ 2.28
CAPNS1-204ENST00000587718 PPARAQ07869 468 aa29.3■■■□□ 2.28
CAPNS1-204ENST00000587718 ALG1Q9BT22 464 aa29.3■■■□□ 2.28
CAPNS1-204ENST00000587718 PICK1Q9NRD5 415 aa29.3■■■□□ 2.28
CAPNS1-204ENST00000587718 ADCY5O95622 1261 aa29.29■■■□□ 2.28
CAPNS1-204ENST00000587718 FGRP09769 529 aa29.29■■■□□ 2.28
CAPNS1-204ENST00000587718 ADGRA1Q86SQ6 560 aa29.29■■■□□ 2.28
CAPNS1-204ENST00000587718 SH3RF3Q8TEJ3 882 aaPredicted RBP29.29■■■□□ 2.28
CAPNS1-204ENST00000587718 MRPS27Q92552 414 aaKnown RBP29.29■■■□□ 2.28
CAPNS1-204ENST00000587718 ARHGAP39Q9C0H5 1083 aa29.29■■■□□ 2.28
CAPNS1-204ENST00000587718 A0A0G2JLL6 359 aaPredicted RBP29.28■■■□□ 2.28
CAPNS1-204ENST00000587718 KINO60870 393 aaKnown RBP29.28■■■□□ 2.28
CAPNS1-204ENST00000587718 FMNL1O95466 1100 aaPredicted RBP29.28■■■□□ 2.28
CAPNS1-204ENST00000587718 PRRT2Q7Z6L0 340 aaPredicted RBP29.28■■■□□ 2.28
CAPNS1-204ENST00000587718 PTMAP06454 111 aaKnown RBP29.27■■■□□ 2.28
CAPNS1-204ENST00000587718 ME1P48163 572 aa29.27■■■□□ 2.28
CAPNS1-204ENST00000587718 GUCY1B3Q02153 619 aa29.27■■■□□ 2.28
CAPNS1-204ENST00000587718 CTDSPL2Q05D32 466 aa29.27■■■□□ 2.28
CAPNS1-204ENST00000587718 TRIM29Q14134 588 aa29.27■■■□□ 2.28
CAPNS1-204ENST00000587718 WTAPQ15007 396 aa29.27■■■□□ 2.28
CAPNS1-204ENST00000587718 STK38Q15208 465 aa29.27■■■□□ 2.28
CAPNS1-204ENST00000587718 TEX11Q8IYF3 940 aa29.27■■■□□ 2.28
CAPNS1-204ENST00000587718 ESR2Q92731 530 aa29.27■■■□□ 2.28
CAPNS1-204ENST00000587718 FAM217BQ9NTX9 383 aaPredicted RBP29.27■■■□□ 2.28
CAPNS1-204ENST00000587718 FAM196BA6NMK8 535 aa29.26■■■□□ 2.28
CAPNS1-204ENST00000587718 SSRP1Q08945 709 aaKnown RBP29.26■■■□□ 2.28
CAPNS1-204ENST00000587718 SNW1Q13573 536 aaKnown RBP29.26■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms