RNA–Protein interactions for RNA: ENST00000586134.5

ZNF540-203, Transcript of zinc finger protein 540, humanhuman

TSL 5

Gene ZNF540, Length 2,038 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-203ENST00000586134 G2E3Q7L622 706 aa11.21□□□□□ -0.61
ZNF540-203ENST00000586134 CDC5LQ99459 802 aaKnown RBP11.21□□□□□ -0.61
ZNF540-203ENST00000586134 TSGA10Q9BZW7 698 aa11.21□□□□□ -0.61
ZNF540-203ENST00000586134 SRCIN1Q9C0H9 1055 aa11.21□□□□□ -0.61
ZNF540-203ENST00000586134 UTP6Q9NYH9 597 aaKnown RBP11.21□□□□□ -0.61
ZNF540-203ENST00000586134 CORO1CQ9ULV4 474 aaPredicted RBP11.21□□□□□ -0.61
ZNF540-203ENST00000586134 L1RE1Q9UN81 338 aa11.21□□□□□ -0.61
ZNF540-203ENST00000586134 TNNQ9UQP3 1299 aa11.21□□□□□ -0.61
ZNF540-203ENST00000586134 URI1O94763 535 aaPredicted RBP11.21□□□□□ -0.62
ZNF540-203ENST00000586134 SASH1O94885 1247 aa11.21□□□□□ -0.62
ZNF540-203ENST00000586134 CCT5P48643 541 aa11.21□□□□□ -0.62
ZNF540-203ENST00000586134 AARSP49588 968 aaKnown RBP eCLIP11.21□□□□□ -0.62
ZNF540-203ENST00000586134 IFFO1Q0D2I5 559 aa11.21□□□□□ -0.62
ZNF540-203ENST00000586134 GCKRQ14397 625 aa11.21□□□□□ -0.62
ZNF540-203ENST00000586134 WASHC4Q2M389 1173 aa11.21□□□□□ -0.62
ZNF540-203ENST00000586134 HOMER1Q86YM7 354 aa11.21□□□□□ -0.62
ZNF540-203ENST00000586134 NUP133Q8WUM0 1156 aa11.21□□□□□ -0.62
ZNF540-203ENST00000586134 DPF2Q92785 391 aa11.21□□□□□ -0.62
ZNF540-203ENST00000586134 ARPC5LQ9BPX5 153 aa11.21□□□□□ -0.62
ZNF540-203ENST00000586134 ADARB2Q9NS39 739 aaKnown RBP11.21□□□□□ -0.62
ZNF540-203ENST00000586134 GPRC5DQ9NZD1 345 aa11.21□□□□□ -0.62
ZNF540-203ENST00000586134 CNPY2Q9Y2B0 182 aa11.21□□□□□ -0.62
ZNF540-203ENST00000586134 A0A1B0GUL6 1792 aa11.2□□□□□ -0.62
ZNF540-203ENST00000586134 SCN9AQ15858 1988 aa11.2□□□□□ -0.62
ZNF540-203ENST00000586134 PPFIA3O75145 1194 aa11.2□□□□□ -0.62
ZNF540-203ENST00000586134 POTEIP0CG38 1075 aa11.2□□□□□ -0.62
ZNF540-203ENST00000586134 POTEJP0CG39 1038 aa11.2□□□□□ -0.62
ZNF540-203ENST00000586134 ZSCAN22P10073 491 aaPredicted RBP11.2□□□□□ -0.62
ZNF540-203ENST00000586134 RPS12P25398 132 aaKnown RBP11.2□□□□□ -0.62
ZNF540-203ENST00000586134 RANBP1P43487 201 aa11.2□□□□□ -0.62
ZNF540-203ENST00000586134 CASP7P55210 303 aa11.2□□□□□ -0.62
ZNF540-203ENST00000586134 ANO6Q4KMQ2 910 aa11.2□□□□□ -0.62
ZNF540-203ENST00000586134 CCDC38Q502W7 563 aa11.2□□□□□ -0.62
ZNF540-203ENST00000586134 LRRC23Q53EV4 343 aaPredicted RBP11.2□□□□□ -0.62
ZNF540-203ENST00000586134 MFSD4BQ5TF39 518 aa11.2□□□□□ -0.62
ZNF540-203ENST00000586134 TTLL11Q8NHH1 800 aa11.2□□□□□ -0.62
ZNF540-203ENST00000586134 ZC3H15Q8WU90 426 aaKnown RBP11.2□□□□□ -0.62
ZNF540-203ENST00000586134 PAGR1Q9BTK6 254 aa11.2□□□□□ -0.62
ZNF540-203ENST00000586134 NAT10Q9H0A0 1025 aaKnown RBP11.2□□□□□ -0.62
ZNF540-203ENST00000586134 INCENPQ9NQS7 918 aa11.2□□□□□ -0.62
ZNF540-203ENST00000586134 PGAP2Q9UHJ9 254 aa11.2□□□□□ -0.62
ZNF540-203ENST00000586134 GJA3Q9Y6H8 435 aa11.2□□□□□ -0.62
ZNF540-203ENST00000586134 XDHP47989 1333 aa11.2□□□□□ -0.62
ZNF540-203ENST00000586134 SPDYE3A6NKU9 549 aa11.19□□□□□ -0.62
ZNF540-203ENST00000586134 GOLGA6L19H0YKK7 550 aa11.19□□□□□ -0.62
ZNF540-203ENST00000586134 PAPOLAP51003 745 aaKnown RBP11.19□□□□□ -0.62
ZNF540-203ENST00000586134 GPSM2P81274 684 aa11.19□□□□□ -0.62
ZNF540-203ENST00000586134 GNL2Q13823 731 aaKnown RBP11.19□□□□□ -0.62
ZNF540-203ENST00000586134 GORABQ5T7V8 394 aa11.19□□□□□ -0.62
ZNF540-203ENST00000586134 SLC51AQ86UW1 340 aa11.19□□□□□ -0.62
ZNF540-203ENST00000586134 FCHSD1Q86WN1 690 aa11.19□□□□□ -0.62
ZNF540-203ENST00000586134 TBC1D16Q8TBP0 767 aa11.19□□□□□ -0.62
ZNF540-203ENST00000586134 CCDC114Q96M63 670 aa11.19□□□□□ -0.62
ZNF540-203ENST00000586134 POLLQ9UGP5 575 aa11.19□□□□□ -0.62
ZNF540-203ENST00000586134 TCHHQ07283 1943 aa11.19□□□□□ -0.62
ZNF540-203ENST00000586134 ZNF646O15015 1829 aaPredicted RBP11.19□□□□□ -0.62
ZNF540-203ENST00000586134 MEFVO15553 781 aaPredicted RBP11.19□□□□□ -0.62
ZNF540-203ENST00000586134 CSF1RP07333 972 aa11.19□□□□□ -0.62
ZNF540-203ENST00000586134 SYT1P21579 422 aa11.19□□□□□ -0.62
ZNF540-203ENST00000586134 ZNF165P49910 485 aa11.19□□□□□ -0.62
ZNF540-203ENST00000586134 PPP2R3AQ06190 1150 aa11.19□□□□□ -0.62
ZNF540-203ENST00000586134 FOXD4L6Q3SYB3 417 aaPredicted RBP11.19□□□□□ -0.62
ZNF540-203ENST00000586134 ARMC3Q5W041 872 aa11.19□□□□□ -0.62
ZNF540-203ENST00000586134 MIS18BP1Q6P0N0 1132 aa11.19□□□□□ -0.62
ZNF540-203ENST00000586134 MTHFD1LQ6UB35 978 aa11.19□□□□□ -0.62
ZNF540-203ENST00000586134 FOXD4L3Q6VB84 417 aaPredicted RBP11.19□□□□□ -0.62
ZNF540-203ENST00000586134 TRIM58Q8NG06 486 aa11.19□□□□□ -0.62
ZNF540-203ENST00000586134 ATL2Q8NHH9 583 aa11.19□□□□□ -0.62
ZNF540-203ENST00000586134 CCDC47Q96A33 483 aaKnown RBP11.19□□□□□ -0.62
ZNF540-203ENST00000586134 CLIC6Q96NY7 704 aa11.19□□□□□ -0.62
ZNF540-203ENST00000586134 EPAS1Q99814 870 aa11.19□□□□□ -0.62
ZNF540-203ENST00000586134 SEC31BQ9NQW1 1179 aa11.19□□□□□ -0.62
ZNF540-203ENST00000586134 DDX19AQ9NUU7 478 aaKnown RBP11.19□□□□□ -0.62
ZNF540-203ENST00000586134 GGA2Q9UJY4 613 aa11.19□□□□□ -0.62
ZNF540-203ENST00000586134 PCDHGC5Q9Y5F6 944 aa11.19□□□□□ -0.62
ZNF540-203ENST00000586134 GOLGA6L9A6NEM1 432 aa11.18□□□□□ -0.62
ZNF540-203ENST00000586134 ENO4A6NNW6 628 aa11.18□□□□□ -0.62
ZNF540-203ENST00000586134 YDJCA8MPS7 323 aa11.18□□□□□ -0.62
ZNF540-203ENST00000586134 MYO1FO00160 1098 aa11.18□□□□□ -0.62
ZNF540-203ENST00000586134 ATP2B4P23634 1241 aa11.18□□□□□ -0.62
ZNF540-203ENST00000586134 CWF19L2Q2TBE0 894 aaKnown RBP11.18□□□□□ -0.62
ZNF540-203ENST00000586134 CCDC40Q4G0X9 1142 aa11.18□□□□□ -0.62
ZNF540-203ENST00000586134 EAPPQ56P03 285 aaPredicted RBP11.18□□□□□ -0.62
ZNF540-203ENST00000586134 TAX1BP1Q86VP1 789 aa11.18□□□□□ -0.62
ZNF540-203ENST00000586134 ITPRIPQ8IWB1 547 aa11.18□□□□□ -0.62
ZNF540-203ENST00000586134 MSANTD4Q8NCY6 345 aa11.18□□□□□ -0.62
ZNF540-203ENST00000586134 CCDC102AQ96A19 550 aa11.18□□□□□ -0.62
ZNF540-203ENST00000586134 IL17RAQ96F46 866 aa11.18□□□□□ -0.62
ZNF540-203ENST00000586134 MMADHCQ9H3L0 296 aaPredicted RBP11.18□□□□□ -0.62
ZNF540-203ENST00000586134 VCPKMTQ9H867 229 aa11.18□□□□□ -0.62
ZNF540-203ENST00000586134 GGA1Q9UJY5 639 aa11.18□□□□□ -0.62
ZNF540-203ENST00000586134 TMEM88BA6NKF7 163 aa11.18□□□□□ -0.62
ZNF540-203ENST00000586134 C6orf229H3BNL8 230 aa11.18□□□□□ -0.62
ZNF540-203ENST00000586134 ALDH1L1O75891 902 aa11.18□□□□□ -0.62
ZNF540-203ENST00000586134 EPS15P42566 896 aa11.18□□□□□ -0.62
ZNF540-203ENST00000586134 TUBB2AQ13885 445 aa11.18□□□□□ -0.62
ZNF540-203ENST00000586134 CCDC57Q2TAC2 916 aa11.18□□□□□ -0.62
ZNF540-203ENST00000586134 BEND3Q5T5X7 828 aa11.18□□□□□ -0.62
ZNF540-203ENST00000586134 CNTROBQ8N137 903 aa11.18□□□□□ -0.62
ZNF540-203ENST00000586134 TUBB2BQ9BVA1 445 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms