RNA–Protein interactions for RNA: ENST00000585026.1

CSNK1D-226, Transcript of casein kinase 1 delta, humanhuman

TSL 5

Gene CSNK1D, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-226ENST00000585026 GOPCQ9HD26 462 aa12.9□□□□□ -0.34
CSNK1D-226ENST00000585026 PDLIM7Q9NR12 457 aa12.9□□□□□ -0.34
CSNK1D-226ENST00000585026 CDK5RAP2Q96SN8 1893 aa12.89□□□□□ -0.35
CSNK1D-226ENST00000585026 TMEM265A0A087WTH1 108 aa12.89□□□□□ -0.35
CSNK1D-226ENST00000585026 TCRBV5S4A2TA0A5A2 114 aa12.89□□□□□ -0.35
CSNK1D-226ENST00000585026 AKR1B1P15121 316 aa12.89□□□□□ -0.35
CSNK1D-226ENST00000585026 STAT3P40763 770 aa12.89□□□□□ -0.35
CSNK1D-226ENST00000585026 FAM47AQ5JRC9 791 aa12.89□□□□□ -0.35
CSNK1D-226ENST00000585026 PRAMEF19Q5SWL8 479 aa12.89□□□□□ -0.35
CSNK1D-226ENST00000585026 RIOX2Q8IUF8 465 aa12.89□□□□□ -0.35
CSNK1D-226ENST00000585026 SLC44A5Q8NCS7 719 aa12.89□□□□□ -0.35
CSNK1D-226ENST00000585026 CDX2Q99626 313 aaPredicted RBP12.89□□□□□ -0.35
CSNK1D-226ENST00000585026 TINF2Q9BSI4 451 aa12.89□□□□□ -0.35
CSNK1D-226ENST00000585026 SEMA6BQ9H3T3 888 aa12.89□□□□□ -0.35
CSNK1D-226ENST00000585026 ARMT1Q9H993 441 aa12.89□□□□□ -0.35
CSNK1D-226ENST00000585026 ZBTB40Q9NUA8 1239 aa12.89□□□□□ -0.35
CSNK1D-226ENST00000585026 PHF24Q9UPV7 400 aa12.89□□□□□ -0.35
CSNK1D-226ENST00000585026 CNPY2Q9Y2B0 182 aa12.89□□□□□ -0.35
CSNK1D-226ENST00000585026 APBB1O00213 710 aa12.88□□□□□ -0.35
CSNK1D-226ENST00000585026 MBD4O95243 580 aa12.88□□□□□ -0.35
CSNK1D-226ENST00000585026 CLTBP09497 229 aa12.88□□□□□ -0.35
CSNK1D-226ENST00000585026 CYP2D6P10635 497 aa12.88□□□□□ -0.35
CSNK1D-226ENST00000585026 AKR1A1P14550 325 aa12.88□□□□□ -0.35
CSNK1D-226ENST00000585026 RAG1P15918 1043 aa12.88□□□□□ -0.35
CSNK1D-226ENST00000585026 CDK8P49336 464 aa12.88□□□□□ -0.35
CSNK1D-226ENST00000585026 TLE2Q04725 743 aa12.88□□□□□ -0.35
CSNK1D-226ENST00000585026 TMEM132BQ14DG7 1078 aa12.88□□□□□ -0.35
CSNK1D-226ENST00000585026 C9orf50Q5SZB4 431 aa12.88□□□□□ -0.35
CSNK1D-226ENST00000585026 C12orf60Q5U649 245 aa12.88□□□□□ -0.35
CSNK1D-226ENST00000585026 ZSCAN25Q6NSZ9 544 aa12.88□□□□□ -0.35
CSNK1D-226ENST00000585026 MAFAQ8NHW3 353 aaPredicted RBP12.88□□□□□ -0.35
CSNK1D-226ENST00000585026 DYNLL2Q96FJ2 89 aa12.88□□□□□ -0.35
CSNK1D-226ENST00000585026 TSEN34Q9BSV6 310 aaKnown RBP12.88□□□□□ -0.35
CSNK1D-226ENST00000585026 PAG1Q9NWQ8 432 aa12.88□□□□□ -0.35
CSNK1D-226ENST00000585026 DDX19BQ9UMR2 479 aa12.88□□□□□ -0.35
CSNK1D-226ENST00000585026 COG6Q9Y2V7 657 aa12.88□□□□□ -0.35
CSNK1D-226ENST00000585026 COL6A3P12111 3177 aa12.87□□□□□ -0.35
CSNK1D-226ENST00000585026 TRIM43BA6NCK2 446 aa12.87□□□□□ -0.35
CSNK1D-226ENST00000585026 DCDC2CA8MYV0 355 aa12.87□□□□□ -0.35
CSNK1D-226ENST00000585026 USP17L12C9JPN9 530 aa12.87□□□□□ -0.35
CSNK1D-226ENST00000585026 USP17L21D6R901 530 aa12.87□□□□□ -0.35
CSNK1D-226ENST00000585026 RAD21O60216 631 aa12.87□□□□□ -0.35
CSNK1D-226ENST00000585026 ADD2P35612 726 aa12.87□□□□□ -0.35
CSNK1D-226ENST00000585026 KIAA1755Q5JYT7 1200 aa12.87□□□□□ -0.35
CSNK1D-226ENST00000585026 CCDC174Q6PII3 467 aa12.87□□□□□ -0.35
CSNK1D-226ENST00000585026 C16orf86Q6ZW13 317 aa12.87□□□□□ -0.35
CSNK1D-226ENST00000585026 SIAH1Q8IUQ4 282 aa12.87□□□□□ -0.35
CSNK1D-226ENST00000585026 MSL3Q8N5Y2 521 aaKnown RBP12.87□□□□□ -0.35
CSNK1D-226ENST00000585026 NUP133Q8WUM0 1156 aa12.87□□□□□ -0.35
CSNK1D-226ENST00000585026 TRIM43Q96BQ3 446 aaPredicted RBP12.87□□□□□ -0.35
CSNK1D-226ENST00000585026 RNPC3Q96LT9 517 aaKnown RBP12.87□□□□□ -0.35
CSNK1D-226ENST00000585026 BCL11AQ9H165 835 aa12.87□□□□□ -0.35
CSNK1D-226ENST00000585026 PPP1R9AQ9ULJ8 1098 aa12.87□□□□□ -0.35
CSNK1D-226ENST00000585026 ADAMTS5Q9UNA0 930 aa12.87□□□□□ -0.35
CSNK1D-226ENST00000585026 CTDP1Q9Y5B0 961 aaPredicted RBP12.87□□□□□ -0.35
CSNK1D-226ENST00000585026 ZNF236Q9UL36 1845 aa12.87□□□□□ -0.35
CSNK1D-226ENST00000585026 VWA5AO00534 786 aa12.86□□□□□ -0.35
CSNK1D-226ENST00000585026 KIAA0355O15063 1070 aa12.86□□□□□ -0.35
CSNK1D-226ENST00000585026 EEF2P13639 858 aaKnown RBP12.86□□□□□ -0.35
CSNK1D-226ENST00000585026 FOSL2P15408 326 aa12.86□□□□□ -0.35
CSNK1D-226ENST00000585026 ATP5JP18859 108 aa12.86□□□□□ -0.35
CSNK1D-226ENST00000585026 FPGSQ05932 587 aa12.86□□□□□ -0.35
CSNK1D-226ENST00000585026 UBE3CQ15386 1083 aa12.86□□□□□ -0.35
CSNK1D-226ENST00000585026 ZNF792Q3KQV3 632 aa12.86□□□□□ -0.35
CSNK1D-226ENST00000585026 SYMPKQ92797 1274 aaKnown RBP12.86□□□□□ -0.35
CSNK1D-226ENST00000585026 DDX11Q96FC9 970 aa12.86□□□□□ -0.35
CSNK1D-226ENST00000585026 CCDC136Q96JN2 1154 aa12.86□□□□□ -0.35
CSNK1D-226ENST00000585026 BOLA2Q9H3K6 86 aa12.86□□□□□ -0.35
CSNK1D-226ENST00000585026 TMEM39AQ9NV64 488 aa12.86□□□□□ -0.35
CSNK1D-226ENST00000585026 FAM184BQ9ULE4 1060 aa12.86□□□□□ -0.35
CSNK1D-226ENST00000585026 MYO5AQ9Y4I1 1855 aaKnown RBP12.86□□□□□ -0.35
CSNK1D-226ENST00000585026 ROBO3Q96MS0 1386 aa12.85□□□□□ -0.35
CSNK1D-226ENST00000585026 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.85□□□□□ -0.35
CSNK1D-226ENST00000585026 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.85□□□□□ -0.35
CSNK1D-226ENST00000585026 A0A1W2PQ45 241 aaPredicted RBP12.85□□□□□ -0.35
CSNK1D-226ENST00000585026 A0A1W2PQY0 241 aa12.85□□□□□ -0.35
CSNK1D-226ENST00000585026 MOXD2PA6NHM9 499 aa12.85□□□□□ -0.35
CSNK1D-226ENST00000585026 PRKAB2O43741 272 aa12.85□□□□□ -0.35
CSNK1D-226ENST00000585026 PQBP1O60828 265 aaKnown RBP12.85□□□□□ -0.35
CSNK1D-226ENST00000585026 PGK1P00558 417 aa12.85□□□□□ -0.35
CSNK1D-226ENST00000585026 PGK2P07205 417 aa12.85□□□□□ -0.35
CSNK1D-226ENST00000585026 EVX2Q03828 476 aa12.85□□□□□ -0.35
CSNK1D-226ENST00000585026 SH3RF1Q7Z6J0 888 aa12.85□□□□□ -0.35
CSNK1D-226ENST00000585026 CLEC10AQ8IUN9 316 aa12.85□□□□□ -0.35
CSNK1D-226ENST00000585026 TOX2Q96NM4 488 aa12.85□□□□□ -0.35
CSNK1D-226ENST00000585026 TEX13BQ9BXU2 312 aa12.85□□□□□ -0.35
CSNK1D-226ENST00000585026 SPC25Q9HBM1 224 aa12.85□□□□□ -0.35
CSNK1D-226ENST00000585026 STARD7Q9NQZ5 370 aa12.85□□□□□ -0.35
CSNK1D-226ENST00000585026 ARPP21Q9UBL0 812 aaPredicted RBP12.85□□□□□ -0.35
CSNK1D-226ENST00000585026 SLC4A4Q9Y6R1 1079 aa12.85□□□□□ -0.35
CSNK1D-226ENST00000585026 A0A0C4DFX4 3053 aa12.84□□□□□ -0.35
CSNK1D-226ENST00000585026 FAM83BQ5T0W9 1011 aa12.84□□□□□ -0.35
CSNK1D-226ENST00000585026 B4GALNT3Q6L9W6 998 aa12.84□□□□□ -0.35
CSNK1D-226ENST00000585026 SIRT2Q8IXJ6 389 aa12.84□□□□□ -0.35
CSNK1D-226ENST00000585026 MYLIPQ8WY64 445 aa12.84□□□□□ -0.35
CSNK1D-226ENST00000585026 HAUS7Q99871 368 aa12.84□□□□□ -0.35
CSNK1D-226ENST00000585026 SLF1Q9BQI6 1058 aa12.84□□□□□ -0.35
CSNK1D-226ENST00000585026 MKNK2Q9HBH9 465 aa12.84□□□□□ -0.35
CSNK1D-226ENST00000585026 ZNF287Q9HBT7 754 aa12.84□□□□□ -0.35
CSNK1D-226ENST00000585026 FBXO28Q9NVF7 368 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms