RNA–Protein interactions for RNA: ENST00000583902.1

CASC3-209, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 557 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-209ENST00000583902 CHURC1Q8WUH1 139 aa10.68□□□□□ -0.7
CASC3-209ENST00000583902 KIF12Q96FN5 646 aa10.68□□□□□ -0.7
CASC3-209ENST00000583902 C12orf42Q96LP6 360 aa10.68□□□□□ -0.7
CASC3-209ENST00000583902 MAF1Q9H063 256 aa10.68□□□□□ -0.7
CASC3-209ENST00000583902 VCPKMTQ9H867 229 aa10.68□□□□□ -0.7
CASC3-209ENST00000583902 GPHNQ9NQX3 736 aaPredicted RBP10.68□□□□□ -0.7
CASC3-209ENST00000583902 FAM217BQ9NTX9 383 aaPredicted RBP10.68□□□□□ -0.7
CASC3-209ENST00000583902 MAD2L2Q9UI95 211 aa10.68□□□□□ -0.7
CASC3-209ENST00000583902 GOLGB1Q14789 3259 aaKnown RBP10.67□□□□□ -0.7
CASC3-209ENST00000583902 F5H6K3 240 aa10.67□□□□□ -0.7
CASC3-209ENST00000583902 CXCL11O14625 94 aa10.67□□□□□ -0.7
CASC3-209ENST00000583902 WDR46O15213 610 aaKnown RBP10.67□□□□□ -0.7
CASC3-209ENST00000583902 GDF11O95390 407 aa10.67□□□□□ -0.7
CASC3-209ENST00000583902 POTEIP0CG38 1075 aa10.67□□□□□ -0.7
CASC3-209ENST00000583902 PTPRAP18433 802 aa10.67□□□□□ -0.7
CASC3-209ENST00000583902 BACE1P56817 501 aa10.67□□□□□ -0.7
CASC3-209ENST00000583902 KLRC3Q07444 240 aa10.67□□□□□ -0.7
CASC3-209ENST00000583902 TRIM29Q14134 588 aa10.67□□□□□ -0.7
CASC3-209ENST00000583902 USP17L2Q6R6M4 530 aa10.67□□□□□ -0.7
CASC3-209ENST00000583902 C2orf69Q8N8R5 385 aa10.67□□□□□ -0.7
CASC3-209ENST00000583902 NECAB1Q8N987 351 aa10.67□□□□□ -0.7
CASC3-209ENST00000583902 ZNF280CQ8ND82 737 aa10.67□□□□□ -0.7
CASC3-209ENST00000583902 NKX2-3Q8TAU0 364 aa10.67□□□□□ -0.7
CASC3-209ENST00000583902 MS4A3Q96HJ5 214 aa10.67□□□□□ -0.7
CASC3-209ENST00000583902 ZSCAN16Q9H4T2 348 aaPredicted RBP10.67□□□□□ -0.7
CASC3-209ENST00000583902 RIOX1Q9H6W3 641 aa10.67□□□□□ -0.7
CASC3-209ENST00000583902 GPBP1L1Q9HC44 474 aaPredicted RBP10.67□□□□□ -0.7
CASC3-209ENST00000583902 SENP2Q9HC62 589 aa10.67□□□□□ -0.7
CASC3-209ENST00000583902 ORC3Q9UBD5 711 aaPredicted RBP10.67□□□□□ -0.7
CASC3-209ENST00000583902 FEM1BQ9UK73 627 aa10.67□□□□□ -0.7
CASC3-209ENST00000583902 MYPNQ86TC9 1320 aa10.66□□□□□ -0.7
CASC3-209ENST00000583902 SSC5DA1L4H1 1573 aa10.66□□□□□ -0.7
CASC3-209ENST00000583902 FAM196BA6NMK8 535 aa10.66□□□□□ -0.7
CASC3-209ENST00000583902 ADM5C9JUS6 153 aa10.66□□□□□ -0.7
CASC3-209ENST00000583902 KLRF2D3W0D1 207 aa10.66□□□□□ -0.7
CASC3-209ENST00000583902 STX6O43752 255 aa10.66□□□□□ -0.7
CASC3-209ENST00000583902 CTDNEP1O95476 244 aa10.66□□□□□ -0.7
CASC3-209ENST00000583902 BMP3P12645 472 aa10.66□□□□□ -0.7
CASC3-209ENST00000583902 CALML3P27482 149 aa10.66□□□□□ -0.7
CASC3-209ENST00000583902 CDC27P30260 824 aa10.66□□□□□ -0.7
CASC3-209ENST00000583902 ADD1P35611 737 aaKnown RBP10.66□□□□□ -0.7
CASC3-209ENST00000583902 ATP2B2Q01814 1243 aa10.66□□□□□ -0.7
CASC3-209ENST00000583902 ST3GAL1Q11201 340 aa10.66□□□□□ -0.7
CASC3-209ENST00000583902 SH3D19Q5HYK7 790 aa10.66□□□□□ -0.7
CASC3-209ENST00000583902 LDLRAD1Q5T700 205 aa10.66□□□□□ -0.7
CASC3-209ENST00000583902 ATL3Q6DD88 541 aa10.66□□□□□ -0.7
CASC3-209ENST00000583902 MCTP2Q6DN12 878 aa10.66□□□□□ -0.7
CASC3-209ENST00000583902 SIAH1Q8IUQ4 282 aa10.66□□□□□ -0.7
CASC3-209ENST00000583902 SMC1BQ8NDV3 1235 aa10.66□□□□□ -0.7
CASC3-209ENST00000583902 CCDC148Q8NFR7 591 aa10.66□□□□□ -0.7
CASC3-209ENST00000583902 RRP36Q96EU6 259 aaKnown RBP10.66□□□□□ -0.7
CASC3-209ENST00000583902 FEZ1Q99689 392 aa10.66□□□□□ -0.7
CASC3-209ENST00000583902 LARP6Q9BRS8 491 aaKnown RBP10.66□□□□□ -0.7
CASC3-209ENST00000583902 SEC63Q9UGP8 760 aaKnown RBP10.66□□□□□ -0.7
CASC3-209ENST00000583902 PHIPQ8WWQ0 1821 aa10.65□□□□□ -0.7
CASC3-209ENST00000583902 SPDYE5A6NIY4 337 aa10.65□□□□□ -0.7
CASC3-209ENST00000583902 H3BQV1 296 aa10.65□□□□□ -0.7
CASC3-209ENST00000583902 NDUFB10O96000 172 aa10.65□□□□□ -0.7
CASC3-209ENST00000583902 SYT1P21579 422 aa10.65□□□□□ -0.7
CASC3-209ENST00000583902 INPP5BP32019 993 aa10.65□□□□□ -0.7
CASC3-209ENST00000583902 STAT2P52630 851 aa10.65□□□□□ -0.7
CASC3-209ENST00000583902 FUT2Q10981 343 aa10.65□□□□□ -0.7
CASC3-209ENST00000583902 PPIL2Q13356 520 aa10.65□□□□□ -0.7
CASC3-209ENST00000583902 TTLL12Q14166 644 aaPredicted RBP10.65□□□□□ -0.7
CASC3-209ENST00000583902 RRP1BQ14684 758 aaKnown RBP10.65□□□□□ -0.7
CASC3-209ENST00000583902 SAFBQ15424 915 aaKnown RBP eCLIP10.65□□□□□ -0.7
CASC3-209ENST00000583902 PFKFB3Q16875 520 aaPredicted RBP10.65□□□□□ -0.7
CASC3-209ENST00000583902 IFFO2Q5TF58 517 aa10.65□□□□□ -0.7
CASC3-209ENST00000583902 PPP1R18Q6NYC8 613 aa10.65□□□□□ -0.7
CASC3-209ENST00000583902 CLEC17AQ6ZS10 378 aa10.65□□□□□ -0.7
CASC3-209ENST00000583902 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.65□□□□□ -0.7
CASC3-209ENST00000583902 NBPF11Q86T75 865 aa10.65□□□□□ -0.7
CASC3-209ENST00000583902 CDAN1Q8IWY9 1227 aa10.65□□□□□ -0.7
CASC3-209ENST00000583902 SAMD3Q8N6K7 520 aa10.65□□□□□ -0.7
CASC3-209ENST00000583902 PROCA1Q8NCQ7 364 aaPredicted RBP10.65□□□□□ -0.7
CASC3-209ENST00000583902 FBXO18Q8NFZ0 1043 aa10.65□□□□□ -0.7
CASC3-209ENST00000583902 C8orf76Q96K31 380 aa10.65□□□□□ -0.7
CASC3-209ENST00000583902 MYL10Q9BUA6 226 aa10.65□□□□□ -0.7
CASC3-209ENST00000583902 GLIS2Q9BZE0 524 aaPredicted RBP10.65□□□□□ -0.7
CASC3-209ENST00000583902 NCOA5Q9HCD5 579 aaKnown RBP10.65□□□□□ -0.7
CASC3-209ENST00000583902 GBA2Q9HCG7 927 aaPredicted RBP10.65□□□□□ -0.7
CASC3-209ENST00000583902 BRMS1Q9HCU9 246 aa10.65□□□□□ -0.7
CASC3-209ENST00000583902 TMOD4Q9NZQ9 345 aa10.65□□□□□ -0.7
CASC3-209ENST00000583902 CNTNAP5Q8WYK1 1306 aa10.64□□□□□ -0.71
CASC3-209ENST00000583902 PNMA6FA0A0J9YX94 578 aa10.64□□□□□ -0.71
CASC3-209ENST00000583902 ESYT2A0FGR8 921 aa10.64□□□□□ -0.71
CASC3-209ENST00000583902 BRD1O95696 1058 aa10.64□□□□□ -0.71
CASC3-209ENST00000583902 SCG2P13521 617 aa10.64□□□□□ -0.71
CASC3-209ENST00000583902 PTMSP20962 102 aa10.64□□□□□ -0.71
CASC3-209ENST00000583902 GNA11P29992 359 aa10.64□□□□□ -0.71
CASC3-209ENST00000583902 SLC4A3P48751 1232 aa10.64□□□□□ -0.71
CASC3-209ENST00000583902 FSTL1Q12841 308 aa10.64□□□□□ -0.71
CASC3-209ENST00000583902 PABPC4Q13310 644 aaKnown RBP eCLIP10.64□□□□□ -0.712e-6■■□□□ 11.4
CASC3-209ENST00000583902 CCDC96Q2M329 555 aa10.64□□□□□ -0.71
CASC3-209ENST00000583902 FASTKD5Q7L8L6 764 aaKnown RBP10.64□□□□□ -0.71
CASC3-209ENST00000583902 BRAPQ7Z569 592 aa10.64□□□□□ -0.71
CASC3-209ENST00000583902 LRRC47Q8N1G4 583 aaKnown RBP10.64□□□□□ -0.71
CASC3-209ENST00000583902 BICD2Q8TD16 824 aa10.64□□□□□ -0.71
CASC3-209ENST00000583902 GTF3C2Q8WUA4 911 aaPredicted RBP10.64□□□□□ -0.71
CASC3-209ENST00000583902 MTMR8Q96EF0 704 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms