RNA–Protein interactions for RNA: ENST00000583800.1

SMCHD1-210, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 5

Gene SMCHD1, Length 865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-210ENST00000583800 Q3C1V9 767 aa9.53□□□□□ -0.88
SMCHD1-210ENST00000583800 CCDC158Q5M9N0 1113 aa9.53□□□□□ -0.88
SMCHD1-210ENST00000583800 MAP3K21Q5TCX8 1036 aa9.53□□□□□ -0.88
SMCHD1-210ENST00000583800 METTL16Q86W50 562 aaKnown RBP9.53□□□□□ -0.88
SMCHD1-210ENST00000583800 TMEM57Q8N5G2 664 aa9.53□□□□□ -0.88
SMCHD1-210ENST00000583800 GPRC5AQ8NFJ5 357 aa9.53□□□□□ -0.88
SMCHD1-210ENST00000583800 SOCS4Q8WXH5 440 aa9.53□□□□□ -0.88
SMCHD1-210ENST00000583800 PAGR1Q9BTK6 254 aa9.53□□□□□ -0.88
SMCHD1-210ENST00000583800 PORCNQ9H237 461 aa9.53□□□□□ -0.88
SMCHD1-210ENST00000583800 GPR108Q9NPR9 543 aa9.53□□□□□ -0.88
SMCHD1-210ENST00000583800 PIH1D3Q9NQM4 214 aaKnown RBP9.53□□□□□ -0.88
SMCHD1-210ENST00000583800 TLR7Q9NYK1 1049 aaKnown RBP9.53□□□□□ -0.88
SMCHD1-210ENST00000583800 RBPJLQ9UBG7 517 aa9.53□□□□□ -0.88
SMCHD1-210ENST00000583800 OGDHLQ9ULD0 1010 aa9.53□□□□□ -0.88
SMCHD1-210ENST00000583800 COL6A3P12111 3177 aa9.53□□□□□ -0.88
SMCHD1-210ENST00000583800 HLA-DOAP06340 250 aa9.52□□□□□ -0.89
SMCHD1-210ENST00000583800 CCND3P30281 292 aaPredicted RBP9.52□□□□□ -0.89
SMCHD1-210ENST00000583800 BMP8BP34820 402 aa9.52□□□□□ -0.89
SMCHD1-210ENST00000583800 MAGEA10P43363 369 aaPredicted RBP9.52□□□□□ -0.89
SMCHD1-210ENST00000583800 CACNB2Q08289 660 aaPredicted RBP9.52□□□□□ -0.89
SMCHD1-210ENST00000583800 PDE3AQ14432 1141 aa9.52□□□□□ -0.89
SMCHD1-210ENST00000583800 ZYXQ15942 572 aaKnown RBP9.52□□□□□ -0.89
SMCHD1-210ENST00000583800 CCL14Q16627 93 aa9.52□□□□□ -0.89
SMCHD1-210ENST00000583800 ZNF787Q6DD87 383 aa9.52□□□□□ -0.89
SMCHD1-210ENST00000583800 GPR142Q7Z601 462 aa9.52□□□□□ -0.89
SMCHD1-210ENST00000583800 FOXP4Q8IVH2 680 aaPredicted RBP9.52□□□□□ -0.89
SMCHD1-210ENST00000583800 SLC17A8Q8NDX2 589 aa9.52□□□□□ -0.89
SMCHD1-210ENST00000583800 MTRQ99707 1265 aa9.52□□□□□ -0.89
SMCHD1-210ENST00000583800 GZF1Q9H116 711 aaPredicted RBP9.52□□□□□ -0.89
SMCHD1-210ENST00000583800 IL21Q9HBE4 155 aa9.52□□□□□ -0.89
SMCHD1-210ENST00000583800 DBNLQ9UJU6 430 aaKnown RBP9.52□□□□□ -0.89
SMCHD1-210ENST00000583800 NDUFB9Q9Y6M9 179 aa9.52□□□□□ -0.89
SMCHD1-210ENST00000583800 SURF6O75683 361 aaKnown RBP9.51□□□□□ -0.89
SMCHD1-210ENST00000583800 GH2P01242 217 aa9.51□□□□□ -0.89
SMCHD1-210ENST00000583800 XRCC5P13010 732 aaKnown RBP9.51□□□□□ -0.89
SMCHD1-210ENST00000583800 CYP7A1P22680 504 aa9.51□□□□□ -0.89
SMCHD1-210ENST00000583800 MAPK4P31152 587 aa9.51□□□□□ -0.89
SMCHD1-210ENST00000583800 RGS2P41220 211 aa9.51□□□□□ -0.89
SMCHD1-210ENST00000583800 MORN1Q5T089 497 aa9.51□□□□□ -0.89
SMCHD1-210ENST00000583800 USP17L2Q6R6M4 530 aa9.51□□□□□ -0.89
SMCHD1-210ENST00000583800 Q7L0L9 218 aa9.51□□□□□ -0.89
SMCHD1-210ENST00000583800 PLEKHH3Q7Z736 793 aa9.51□□□□□ -0.89
SMCHD1-210ENST00000583800 CCAR1Q8IX12 1150 aaKnown RBP9.51□□□□□ -0.89
SMCHD1-210ENST00000583800 MIGA1Q8NAN2 632 aa9.51□□□□□ -0.89
SMCHD1-210ENST00000583800 SSH3Q8TE77 659 aa9.51□□□□□ -0.89
SMCHD1-210ENST00000583800 USP6NLQ92738 828 aa9.51□□□□□ -0.89
SMCHD1-210ENST00000583800 FEZ1Q99689 392 aa9.51□□□□□ -0.89
SMCHD1-210ENST00000583800 APBA2Q99767 749 aa9.51□□□□□ -0.89
SMCHD1-210ENST00000583800 CCDC8Q9H0W5 538 aaPredicted RBP9.51□□□□□ -0.89
SMCHD1-210ENST00000583800 GINM1Q9NU53 330 aa9.51□□□□□ -0.89
SMCHD1-210ENST00000583800 LTBP2Q14767 1821 aa9.51□□□□□ -0.89
SMCHD1-210ENST00000583800 PARP14Q460N5 1801 aa9.51□□□□□ -0.89
SMCHD1-210ENST00000583800 A0A0G2JMZ2 1700 aa9.51□□□□□ -0.89
SMCHD1-210ENST00000583800 RLFQ13129 1914 aa9.5□□□□□ -0.89
SMCHD1-210ENST00000583800 DLL1O00548 723 aa9.5□□□□□ -0.89
SMCHD1-210ENST00000583800 CNMDO75829 334 aa9.5□□□□□ -0.89
SMCHD1-210ENST00000583800 IDH1O75874 414 aaKnown RBP9.5□□□□□ -0.89
SMCHD1-210ENST00000583800 COL6A1P12109 1028 aa9.5□□□□□ -0.89
SMCHD1-210ENST00000583800 USP5P45974 858 aa9.5□□□□□ -0.89
SMCHD1-210ENST00000583800 MFAP1P55081 439 aaKnown RBP9.5□□□□□ -0.89
SMCHD1-210ENST00000583800 ATP8B2P98198 1209 aa9.5□□□□□ -0.89
SMCHD1-210ENST00000583800 ZKSCAN2Q63HK3 967 aa9.5□□□□□ -0.89
SMCHD1-210ENST00000583800 TDHQ8IZJ6 230 aa9.5□□□□□ -0.89
SMCHD1-210ENST00000583800 GTF3C2Q8WUA4 911 aaPredicted RBP9.5□□□□□ -0.89
SMCHD1-210ENST00000583800 ZNF512BQ96KM6 892 aaPredicted RBP9.5□□□□□ -0.89
SMCHD1-210ENST00000583800 C12orf42Q96LP6 360 aa9.5□□□□□ -0.89
SMCHD1-210ENST00000583800 CWC22Q9HCG8 908 aaKnown RBP9.5□□□□□ -0.89
SMCHD1-210ENST00000583800 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.5□□□□□ -0.89
SMCHD1-210ENST00000583800 COG6Q9Y2V7 657 aa9.5□□□□□ -0.89
SMCHD1-210ENST00000583800 BAZ2AQ9UIF9 1905 aaKnown RBP9.5□□□□□ -0.89
SMCHD1-210ENST00000583800 COL11A1P12107 1806 aaPredicted RBP9.49□□□□□ -0.89
SMCHD1-210ENST00000583800 ZNF236Q9UL36 1845 aa9.49□□□□□ -0.89
SMCHD1-210ENST00000583800 ZNFX1Q9P2E3 1918 aaKnown RBP9.49□□□□□ -0.89
SMCHD1-210ENST00000583800 CCER2I3L3R5 266 aa9.49□□□□□ -0.89
SMCHD1-210ENST00000583800 VCAM1P19320 739 aa9.49□□□□□ -0.89
SMCHD1-210ENST00000583800 PTGDRQ13258 359 aa9.49□□□□□ -0.89
SMCHD1-210ENST00000583800 RAB3GAP1Q15042 981 aa9.49□□□□□ -0.89
SMCHD1-210ENST00000583800 LRRC26Q2I0M4 334 aa9.49□□□□□ -0.89
SMCHD1-210ENST00000583800 TSR1Q2NL82 804 aaKnown RBP9.49□□□□□ -0.89
SMCHD1-210ENST00000583800 LRIT3Q3SXY7 679 aa9.49□□□□□ -0.89
SMCHD1-210ENST00000583800 WDR78Q5VTH9 848 aa9.49□□□□□ -0.89
SMCHD1-210ENST00000583800 TATDN1Q6P1N9 297 aa9.49□□□□□ -0.89
SMCHD1-210ENST00000583800 TRMT44Q8IYL2 757 aaKnown RBP9.49□□□□□ -0.89
SMCHD1-210ENST00000583800 DEFB123Q8N688 67 aa9.49□□□□□ -0.89
SMCHD1-210ENST00000583800 MAGEB6Q8N7X4 407 aa9.49□□□□□ -0.89
SMCHD1-210ENST00000583800 EAF2Q96CJ1 260 aaPredicted RBP9.49□□□□□ -0.89
SMCHD1-210ENST00000583800 UBE2OQ9C0C9 1292 aaKnown RBP9.49□□□□□ -0.89
SMCHD1-210ENST00000583800 ANTXR1Q9H6X2 564 aa9.49□□□□□ -0.89
SMCHD1-210ENST00000583800 CDHR5Q9HBB8 845 aa9.49□□□□□ -0.89
SMCHD1-210ENST00000583800 FLRT1Q9NZU1 646 aa9.49□□□□□ -0.89
SMCHD1-210ENST00000583800 MYH7P12883 1935 aa9.48□□□□□ -0.89
SMCHD1-210ENST00000583800 USP17L15C9J2P7 530 aa9.48□□□□□ -0.89
SMCHD1-210ENST00000583800 USP17L13C9JLJ4 530 aa9.48□□□□□ -0.89
SMCHD1-210ENST00000583800 USP17L11C9JVI0 530 aa9.48□□□□□ -0.89
SMCHD1-210ENST00000583800 USP17L18D6R9N7 530 aa9.48□□□□□ -0.89
SMCHD1-210ENST00000583800 USP17L22D6RA61 530 aa9.48□□□□□ -0.89
SMCHD1-210ENST00000583800 USP17L17D6RBQ6 530 aa9.48□□□□□ -0.89
SMCHD1-210ENST00000583800 USP17L19D6RCP7 530 aa9.48□□□□□ -0.89
SMCHD1-210ENST00000583800 USP17L20D6RJB6 530 aa9.48□□□□□ -0.89
SMCHD1-210ENST00000583800 SMAPO00193 183 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms