RNA–Protein interactions for RNA: ENST00000583577.1

MKS1-212, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-212ENST00000583577 PBX2P40425 430 aa11.62□□□□□ -0.55
MKS1-212ENST00000583577 ZAP70P43403 619 aa11.62□□□□□ -0.55
MKS1-212ENST00000583577 SPP2Q13103 211 aa11.62□□□□□ -0.55
MKS1-212ENST00000583577 CSPP1Q1MSJ5 1256 aa11.62□□□□□ -0.55
MKS1-212ENST00000583577 MFSD14CQ5VZR4 134 aa11.62□□□□□ -0.55
MKS1-212ENST00000583577 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.62□□□□□ -0.55
MKS1-212ENST00000583577 USP6NLQ92738 828 aa11.62□□□□□ -0.55
MKS1-212ENST00000583577 PDLIM2Q96JY6 352 aa11.62□□□□□ -0.55
MKS1-212ENST00000583577 C11orf16Q9NQ32 467 aa11.62□□□□□ -0.55
MKS1-212ENST00000583577 RAI14Q9P0K7 980 aa11.62□□□□□ -0.55
MKS1-212ENST00000583577 LRP2BPQ9P2M1 347 aa11.62□□□□□ -0.55
MKS1-212ENST00000583577 ATP6V1DQ9Y5K8 247 aa11.62□□□□□ -0.55
MKS1-212ENST00000583577 ATRNL1Q5VV63 1379 aa11.62□□□□□ -0.55
MKS1-212ENST00000583577 LRRC37A2A6NM11 1700 aa11.61□□□□□ -0.55
MKS1-212ENST00000583577 GRXCR1A8MXD5 290 aa11.61□□□□□ -0.55
MKS1-212ENST00000583577 KBTBD13C9JR72 458 aa11.61□□□□□ -0.55
MKS1-212ENST00000583577 BRD1O95696 1058 aa11.61□□□□□ -0.55
MKS1-212ENST00000583577 ATP5JP18859 108 aa11.61□□□□□ -0.55
MKS1-212ENST00000583577 MSNP26038 577 aaKnown RBP11.61□□□□□ -0.55
MKS1-212ENST00000583577 IRX3P78415 501 aaPredicted RBP11.61□□□□□ -0.55
MKS1-212ENST00000583577 FPGSQ05932 587 aa11.61□□□□□ -0.55
MKS1-212ENST00000583577 TTF1Q15361 905 aaPredicted RBP11.61□□□□□ -0.55
MKS1-212ENST00000583577 DIXDC1Q155Q3 683 aa11.61□□□□□ -0.55
MKS1-212ENST00000583577 AAK1Q2M2I8 961 aa11.61□□□□□ -0.55
MKS1-212ENST00000583577 UVSSAQ2YD98 709 aa11.61□□□□□ -0.55
MKS1-212ENST00000583577 ZSCAN23Q3MJ62 389 aa11.61□□□□□ -0.55
MKS1-212ENST00000583577 MCTP1Q6DN14 999 aa11.61□□□□□ -0.55
MKS1-212ENST00000583577 LRSAM1Q6UWE0 723 aa11.61□□□□□ -0.55
MKS1-212ENST00000583577 GAS2L3Q86XJ1 694 aa11.61□□□□□ -0.55
MKS1-212ENST00000583577 GPRC5AQ8NFJ5 357 aa11.61□□□□□ -0.55
MKS1-212ENST00000583577 FERMT2Q96AC1 680 aa11.61□□□□□ -0.55
MKS1-212ENST00000583577 APBA2Q99767 749 aa11.61□□□□□ -0.55
MKS1-212ENST00000583577 PBX4Q9BYU1 374 aa11.61□□□□□ -0.55
MKS1-212ENST00000583577 TXNRD2Q9NNW7 524 aa11.61□□□□□ -0.55
MKS1-212ENST00000583577 ECHDC1Q9NTX5 307 aa11.61□□□□□ -0.55
MKS1-212ENST00000583577 TTC41PQ6P2S7 1318 aa11.6□□□□□ -0.55
MKS1-212ENST00000583577 FOCADQ5VW36 1801 aa11.6□□□□□ -0.55
MKS1-212ENST00000583577 PTPRZ1P23471 2315 aaPredicted RBP11.6□□□□□ -0.55
MKS1-212ENST00000583577 SMIM22K7EJ46 135 aa11.6□□□□□ -0.55
MKS1-212ENST00000583577 MSCO60682 206 aa11.6□□□□□ -0.55
MKS1-212ENST00000583577 IGSF3O75054 1194 aa11.6□□□□□ -0.55
MKS1-212ENST00000583577 LDHCP07864 332 aa11.6□□□□□ -0.55
MKS1-212ENST00000583577 RAG1P15918 1043 aa11.6□□□□□ -0.55
MKS1-212ENST00000583577 CHMLP26374 656 aa11.6□□□□□ -0.55
MKS1-212ENST00000583577 MAPK4P31152 587 aa11.6□□□□□ -0.55
MKS1-212ENST00000583577 GSTO1P78417 241 aa11.6□□□□□ -0.55
MKS1-212ENST00000583577 TLE2Q04725 743 aa11.6□□□□□ -0.55
MKS1-212ENST00000583577 SKIV2LQ15477 1246 aaKnown RBP11.6□□□□□ -0.55
MKS1-212ENST00000583577 MORN1Q5T089 497 aa11.6□□□□□ -0.55
MKS1-212ENST00000583577 ANO1Q5XXA6 986 aa11.6□□□□□ -0.55
MKS1-212ENST00000583577 GPR142Q7Z601 462 aa11.6□□□□□ -0.55
MKS1-212ENST00000583577 PLEKHH3Q7Z736 793 aa11.6□□□□□ -0.55
MKS1-212ENST00000583577 TMEM87AQ8NBN3 555 aa11.6□□□□□ -0.55
MKS1-212ENST00000583577 ARRDC4Q8NCT1 418 aa11.6□□□□□ -0.55
MKS1-212ENST00000583577 RUFY2Q8WXA3 655 aa11.6□□□□□ -0.55
MKS1-212ENST00000583577 KHSRPQ92945 711 aaKnown RBP eCLIP11.6□□□□□ -0.55
MKS1-212ENST00000583577 DNAJC2Q99543 621 aaKnown RBP11.6□□□□□ -0.55
MKS1-212ENST00000583577 PORCNQ9H237 461 aa11.6□□□□□ -0.55
MKS1-212ENST00000583577 BOLA2Q9H3K6 86 aa11.6□□□□□ -0.55
MKS1-212ENST00000583577 FLRT1Q9NZU1 646 aa11.6□□□□□ -0.55
MKS1-212ENST00000583577 CACNA1BQ00975 2339 aa11.59□□□□□ -0.55
MKS1-212ENST00000583577 MYH1P12882 1939 aa11.59□□□□□ -0.55
MKS1-212ENST00000583577 ZNF500O60304 480 aaPredicted RBP11.59□□□□□ -0.55
MKS1-212ENST00000583577 HSPA4P34932 840 aa11.59□□□□□ -0.55
MKS1-212ENST00000583577 ADCYAP1R1P41586 468 aa11.59□□□□□ -0.55
MKS1-212ENST00000583577 NEK4P51957 841 aa11.59□□□□□ -0.55
MKS1-212ENST00000583577 MECOMQ03112 1051 aa11.59□□□□□ -0.55
MKS1-212ENST00000583577 SH3BP5LQ7L8J4 393 aa11.59□□□□□ -0.55
MKS1-212ENST00000583577 ZNF280CQ8ND82 737 aa11.59□□□□□ -0.55
MKS1-212ENST00000583577 TMX3Q96JJ7 454 aa11.59□□□□□ -0.55
MKS1-212ENST00000583577 NOL10Q9BSC4 688 aaKnown RBP11.59□□□□□ -0.55
MKS1-212ENST00000583577 PAGR1Q9BTK6 254 aa11.59□□□□□ -0.55
MKS1-212ENST00000583577 NOL7Q9UMY1 257 aaKnown RBP11.59□□□□□ -0.55
MKS1-212ENST00000583577 TACC3Q9Y6A5 838 aa11.59□□□□□ -0.55
MKS1-212ENST00000583577 NDUFB9Q9Y6M9 179 aa11.59□□□□□ -0.55
MKS1-212ENST00000583577 ZFHX2Q9C0A1 2572 aaPredicted RBP11.59□□□□□ -0.55
MKS1-212ENST00000583577 ZNF318Q5VUA4 2279 aa11.58□□□□□ -0.55
MKS1-212ENST00000583577 DDTLA6NHG4 134 aaPredicted RBP11.58□□□□□ -0.56
MKS1-212ENST00000583577 HIP1O00291 1037 aa11.58□□□□□ -0.56
MKS1-212ENST00000583577 GOLIM4O00461 696 aa11.58□□□□□ -0.56
MKS1-212ENST00000583577 IDH1O75874 414 aaKnown RBP11.58□□□□□ -0.56
MKS1-212ENST00000583577 CLTBP09497 229 aa11.58□□□□□ -0.56
MKS1-212ENST00000583577 CYP2C19P33261 490 aa11.58□□□□□ -0.56
MKS1-212ENST00000583577 ATP2B2Q01814 1243 aa11.58□□□□□ -0.56
MKS1-212ENST00000583577 NHLH1Q02575 133 aa11.58□□□□□ -0.56
MKS1-212ENST00000583577 MAP2K5Q13163 448 aa11.58□□□□□ -0.56
MKS1-212ENST00000583577 SNX17Q15036 470 aa11.58□□□□□ -0.56
MKS1-212ENST00000583577 Q3C1V9 767 aa11.58□□□□□ -0.56
MKS1-212ENST00000583577 NAA16Q6N069 864 aaPredicted RBP11.58□□□□□ -0.56
MKS1-212ENST00000583577 TICAM2Q86XR7 235 aa11.58□□□□□ -0.56
MKS1-212ENST00000583577 TRPV1Q8NER1 839 aa11.58□□□□□ -0.56
MKS1-212ENST00000583577 NSUN4Q96CB9 384 aaKnown RBP11.58□□□□□ -0.56
MKS1-212ENST00000583577 EDC3Q96F86 508 aaKnown RBP11.58□□□□□ -0.56
MKS1-212ENST00000583577 NAP1L5Q96NT1 182 aaPredicted RBP11.58□□□□□ -0.56
MKS1-212ENST00000583577 UIMC1Q96RL1 719 aa11.58□□□□□ -0.56
MKS1-212ENST00000583577 MAP7D2Q96T17 732 aa11.58□□□□□ -0.56
MKS1-212ENST00000583577 HAUS7Q99871 368 aa11.58□□□□□ -0.56
MKS1-212ENST00000583577 PIH1D3Q9NQM4 214 aaKnown RBP11.58□□□□□ -0.56
MKS1-212ENST00000583577 PAG1Q9NWQ8 432 aa11.58□□□□□ -0.56
MKS1-212ENST00000583577 CCDC39Q9UFE4 941 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms