RNA–Protein interactions for RNA: ENST00000583160.5

COPS3-217, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 365 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-217ENST00000583160 DDX41Q9UJV9 622 aaKnown RBP6.97□□□□□ -1.29
COPS3-217ENST00000583160 FZD5Q13467 585 aa6.96□□□□□ -1.3
COPS3-217ENST00000583160 INTS3Q68E01 1043 aaKnown RBP6.96□□□□□ -1.3
COPS3-217ENST00000583160 RNF111Q6ZNA4 994 aa6.96□□□□□ -1.3
COPS3-217ENST00000583160 ZNF655Q8N720 491 aaPredicted RBP6.96□□□□□ -1.3
COPS3-217ENST00000583160 TCTN2Q96GX1 697 aa6.96□□□□□ -1.3
COPS3-217ENST00000583160 FERD3LQ96RJ6 166 aa6.96□□□□□ -1.3
COPS3-217ENST00000583160 PRDM14Q9GZV8 571 aa6.96□□□□□ -1.3
COPS3-217ENST00000583160 MKRN2Q9H000 416 aaKnown RBP6.96□□□□□ -1.3
COPS3-217ENST00000583160 EBF1Q9UH73 591 aa6.96□□□□□ -1.3
COPS3-217ENST00000583160 ZNRF3Q9ULT6 936 aa6.96□□□□□ -1.3
COPS3-217ENST00000583160 ZNF281Q9Y2X9 895 aa6.96□□□□□ -1.3
COPS3-217ENST00000583160 SSU72P8A0A1W2PR75 194 aa6.95□□□□□ -1.3
COPS3-217ENST00000583160 FITM1A5D6W6 292 aa6.95□□□□□ -1.3
COPS3-217ENST00000583160 FAM86C2PA6NEL3 165 aa6.95□□□□□ -1.3
COPS3-217ENST00000583160 BTBD11A6QL63 1104 aa6.95□□□□□ -1.3
COPS3-217ENST00000583160 PRAMEF1O95521 474 aa6.95□□□□□ -1.3
COPS3-217ENST00000583160 IMPDH2P12268 514 aa6.95□□□□□ -1.3
COPS3-217ENST00000583160 RPL10P27635 214 aaKnown RBP6.95□□□□□ -1.3
COPS3-217ENST00000583160 DUSP4Q13115 394 aa6.95□□□□□ -1.3
COPS3-217ENST00000583160 SPPL2CQ8IUH8 684 aa6.95□□□□□ -1.3
COPS3-217ENST00000583160 LILRA2Q8N149 483 aa6.95□□□□□ -1.3
COPS3-217ENST00000583160 FOXP3Q9BZS1 431 aa6.95□□□□□ -1.3
COPS3-217ENST00000583160 RNF32Q9H0A6 362 aa6.95□□□□□ -1.3
COPS3-217ENST00000583160 NSUN3Q9H649 340 aaKnown RBP6.95□□□□□ -1.3
COPS3-217ENST00000583160 SIGLEC6O43699 453 aa6.94□□□□□ -1.3
COPS3-217ENST00000583160 ACRP10323 421 aa6.94□□□□□ -1.3
COPS3-217ENST00000583160 PCBP3P57721 371 aaKnown RBP6.94□□□□□ -1.3
COPS3-217ENST00000583160 JAG1P78504 1218 aa6.94□□□□□ -1.3
COPS3-217ENST00000583160 NR0B2Q15466 257 aa6.94□□□□□ -1.3
COPS3-217ENST00000583160 TIGD5Q53EQ6 642 aa6.94□□□□□ -1.3
COPS3-217ENST00000583160 FBXW10Q5XX13 1052 aa6.94□□□□□ -1.3
COPS3-217ENST00000583160 SYDE1Q6ZW31 735 aaPredicted RBP6.94□□□□□ -1.3
COPS3-217ENST00000583160 ZNF654Q8IZM8 581 aa6.94□□□□□ -1.3
COPS3-217ENST00000583160 ANKS4BQ8N8V4 417 aa6.94□□□□□ -1.3
COPS3-217ENST00000583160 LINC01599Q8WXQ3 324 aa6.94□□□□□ -1.3
COPS3-217ENST00000583160 MRRFQ96E11 262 aaKnown RBP6.94□□□□□ -1.3
COPS3-217ENST00000583160 FBXL21Q9UKT6 434 aa6.94□□□□□ -1.3
COPS3-217ENST00000583160 TCFL5Q9UL49 500 aa6.94□□□□□ -1.3
COPS3-217ENST00000583160 MINPP1Q9UNW1 487 aa6.94□□□□□ -1.3
COPS3-217ENST00000583160 DBX1A6NMT0 343 aa6.93□□□□□ -1.3
COPS3-217ENST00000583160 CHRNEQ04844 493 aa6.93□□□□□ -1.3
COPS3-217ENST00000583160 PAK2Q13177 524 aa6.93□□□□□ -1.3
COPS3-217ENST00000583160 WAPLQ7Z5K2 1190 aa6.93□□□□□ -1.3
COPS3-217ENST00000583160 METTL16Q86W50 562 aaKnown RBP6.93□□□□□ -1.3
COPS3-217ENST00000583160 FBXO15Q8NCQ5 510 aaPredicted RBP6.93□□□□□ -1.3
COPS3-217ENST00000583160 LINC00116Q8NCU8 138 aa6.93□□□□□ -1.3
COPS3-217ENST00000583160 BHLHE22Q8NFJ8 381 aaPredicted RBP6.93□□□□□ -1.3
COPS3-217ENST00000583160 DHRS1Q96LJ7 313 aa6.93□□□□□ -1.3
COPS3-217ENST00000583160 G6PC3Q9BUM1 346 aa6.93□□□□□ -1.3
COPS3-217ENST00000583160 KRTAP9-9Q9BYP9 154 aa6.93□□□□□ -1.3
COPS3-217ENST00000583160 KRTAP9-4Q9BYQ2 154 aa6.93□□□□□ -1.3
COPS3-217ENST00000583160 KCNK12Q9HB15 430 aa6.93□□□□□ -1.3
COPS3-217ENST00000583160 DCP1AQ9NPI6 582 aaPredicted RBP6.93□□□□□ -1.3
COPS3-217ENST00000583160 CHST7Q9NS84 486 aa6.93□□□□□ -1.3
COPS3-217ENST00000583160 ZMYM5Q9UJ78 669 aa6.93□□□□□ -1.3
COPS3-217ENST00000583160 PPT2Q9UMR5 302 aa6.93□□□□□ -1.3
COPS3-217ENST00000583160 PCDHB12Q9Y5F1 795 aa6.93□□□□□ -1.3
COPS3-217ENST00000583160 SYPP08247 313 aa6.92□□□□□ -1.3
COPS3-217ENST00000583160 AUHQ13825 339 aaKnown RBP6.92□□□□□ -1.3
COPS3-217ENST00000583160 TM9SF2Q99805 663 aa6.92□□□□□ -1.3
COPS3-217ENST00000583160 EPB41L4BQ9H329 900 aa6.92□□□□□ -1.3
COPS3-217ENST00000583160 GFOD1Q9NXC2 390 aa6.92□□□□□ -1.3
COPS3-217ENST00000583160 SUCOQ9UBS9 1254 aaKnown RBP6.92□□□□□ -1.3
COPS3-217ENST00000583160 GPR160Q9UJ42 338 aa6.92□□□□□ -1.3
COPS3-217ENST00000583160 TMEM82A0PJX8 343 aa6.91□□□□□ -1.3
COPS3-217ENST00000583160 C9IYK1 514 aa6.91□□□□□ -1.3
COPS3-217ENST00000583160 MEIS1O00470 390 aa6.91□□□□□ -1.3
COPS3-217ENST00000583160 PSPNO60542 156 aa6.91□□□□□ -1.3
COPS3-217ENST00000583160 FKTNO75072 461 aa6.91□□□□□ -1.3
COPS3-217ENST00000583160 SNX17Q15036 470 aa6.91□□□□□ -1.3
COPS3-217ENST00000583160 BBS9Q3SYG4 887 aa6.91□□□□□ -1.3
COPS3-217ENST00000583160 ZPBP2Q6X784 338 aa6.91□□□□□ -1.3
COPS3-217ENST00000583160 TAB3Q8N5C8 712 aaPredicted RBP6.91□□□□□ -1.3
COPS3-217ENST00000583160 RBBP8NLQ8NC74 664 aaPredicted RBP6.91□□□□□ -1.3
COPS3-217ENST00000583160 PPP1R16BQ96T49 567 aa6.91□□□□□ -1.3
COPS3-217ENST00000583160 CWC22Q9HCG8 908 aaKnown RBP6.91□□□□□ -1.3
COPS3-217ENST00000583160 GINM1Q9NU53 330 aa6.91□□□□□ -1.3
COPS3-217ENST00000583160 RAP1GAPP47736 663 aa6.9□□□□□ -1.3
COPS3-217ENST00000583160 HDLBPQ00341 1268 aaKnown RBP6.9□□□□□ -1.3
COPS3-217ENST00000583160 COL9A2Q14055 689 aaPredicted RBP6.9□□□□□ -1.3
COPS3-217ENST00000583160 C9orf131Q5VYM1 1079 aa6.9□□□□□ -1.3
COPS3-217ENST00000583160 RUFY4Q6ZNE9 571 aa6.9□□□□□ -1.3
COPS3-217ENST00000583160 CCDC144CPQ8IYA2 1237 aa6.9□□□□□ -1.3
COPS3-217ENST00000583160 SLC6A17Q9H1V8 727 aa6.9□□□□□ -1.3
COPS3-217ENST00000583160 YBX2Q9Y2T7 364 aaKnown RBP6.9□□□□□ -1.3
COPS3-217ENST00000583160 NOTOA8MTQ0 251 aa6.89□□□□□ -1.31
COPS3-217ENST00000583160 USP2O75604 605 aaPredicted RBP6.89□□□□□ -1.31
COPS3-217ENST00000583160 TSPAN15O95858 294 aa6.89□□□□□ -1.31
COPS3-217ENST00000583160 GUCY2CP25092 1073 aa6.89□□□□□ -1.31
COPS3-217ENST00000583160 GALK1P51570 392 aa6.89□□□□□ -1.31
COPS3-217ENST00000583160 PMS1P54277 932 aaKnown RBP6.89□□□□□ -1.31
COPS3-217ENST00000583160 ZYXQ15942 572 aaKnown RBP6.89□□□□□ -1.31
COPS3-217ENST00000583160 TDRD10Q5VZ19 366 aaKnown RBP6.89□□□□□ -1.31
COPS3-217ENST00000583160 UNC5AQ6ZN44 842 aa6.89□□□□□ -1.31
COPS3-217ENST00000583160 CCDC81Q6ZN84 652 aa6.89□□□□□ -1.31
COPS3-217ENST00000583160 LSRQ86X29 649 aaPredicted RBP6.89□□□□□ -1.31
COPS3-217ENST00000583160 NT5DC4Q86YG4 428 aa6.89□□□□□ -1.31
COPS3-217ENST00000583160 C7orf61Q8IZ16 206 aa6.89□□□□□ -1.31
COPS3-217ENST00000583160 SHISA4Q96DD7 197 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms