RNA–Protein interactions for RNA: ENST00000582821.5

GGA3-215, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 1,018 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-215ENST00000582821 CTNNA3Q9UI47 895 aa16.54■□□□□ 0.24
GGA3-215ENST00000582821 PPP1R9AQ9ULJ8 1098 aa16.54■□□□□ 0.24
GGA3-215ENST00000582821 A0A0G2JMZ2 1700 aa16.53■□□□□ 0.24
GGA3-215ENST00000582821 PDE4DIPQ5VU43 2346 aa16.53■□□□□ 0.24
GGA3-215ENST00000582821 ZNF213O14771 459 aa16.53■□□□□ 0.24
GGA3-215ENST00000582821 UBXN2AP68543 259 aa16.53■□□□□ 0.24
GGA3-215ENST00000582821 MLLT1Q03111 559 aaPredicted RBP16.53■□□□□ 0.24
GGA3-215ENST00000582821 FAM83BQ5T0W9 1011 aa16.53■□□□□ 0.24
GGA3-215ENST00000582821 MFSD6Q6ZSS7 791 aa16.53■□□□□ 0.24
GGA3-215ENST00000582821 SOCS4Q8WXH5 440 aa16.53■□□□□ 0.24
GGA3-215ENST00000582821 ATG4CQ96DT6 458 aa16.53■□□□□ 0.24
GGA3-215ENST00000582821 SPATC1LQ9H0A9 340 aa16.53■□□□□ 0.24
GGA3-215ENST00000582821 IL25Q9H293 177 aa16.53■□□□□ 0.24
GGA3-215ENST00000582821 RNF41Q9H4P4 317 aaPredicted RBP16.53■□□□□ 0.24
GGA3-215ENST00000582821 POTEFA5A3E0 1075 aa16.52■□□□□ 0.24
GGA3-215ENST00000582821 HAND2P61296 217 aa16.52■□□□□ 0.24
GGA3-215ENST00000582821 MOV10L1Q9BXT6 1211 aaKnown RBP16.52■□□□□ 0.24
GGA3-215ENST00000582821 FBXO28Q9NVF7 368 aa16.52■□□□□ 0.24
GGA3-215ENST00000582821 COL11A1P12107 1806 aaPredicted RBP16.52■□□□□ 0.23
GGA3-215ENST00000582821 ZNFX1Q9P2E3 1918 aaKnown RBP16.51■□□□□ 0.23
GGA3-215ENST00000582821 SLC15A5A6NIM6 579 aa16.51■□□□□ 0.23
GGA3-215ENST00000582821 VWA5AO00534 786 aa16.51■□□□□ 0.23
GGA3-215ENST00000582821 STRNO43815 780 aa16.51■□□□□ 0.23
GGA3-215ENST00000582821 RAD21O60216 631 aa16.51■□□□□ 0.23
GGA3-215ENST00000582821 PTPREP23469 700 aa16.51■□□□□ 0.23
GGA3-215ENST00000582821 MTFR1Q15390 333 aa16.51■□□□□ 0.23
GGA3-215ENST00000582821 SLFN13Q68D06 897 aa16.51■□□□□ 0.23
GGA3-215ENST00000582821 TBC1D10CQ8IV04 446 aa16.51■□□□□ 0.23
GGA3-215ENST00000582821 TRMT44Q8IYL2 757 aaKnown RBP16.51■□□□□ 0.23
GGA3-215ENST00000582821 PRPF38AQ8NAV1 312 aaKnown RBP16.51■□□□□ 0.23
GGA3-215ENST00000582821 TTC14Q96N46 770 aa16.51■□□□□ 0.23
GGA3-215ENST00000582821 SLF1Q9BQI6 1058 aa16.51■□□□□ 0.23
GGA3-215ENST00000582821 BIN2Q9UBW5 565 aaPredicted RBP16.51■□□□□ 0.23
GGA3-215ENST00000582821 LAMA4Q16363 1823 aa16.51■□□□□ 0.23
GGA3-215ENST00000582821 MKI67P46013 3256 aaKnown RBP16.5■□□□□ 0.23
GGA3-215ENST00000582821 TNRC18O15417 2968 aaPredicted RBP16.5■□□□□ 0.23
GGA3-215ENST00000582821 SGSM2O43147 1006 aa16.5■□□□□ 0.23
GGA3-215ENST00000582821 NMT2O60551 498 aa16.5■□□□□ 0.23
GGA3-215ENST00000582821 PLA2G6O60733 806 aa16.5■□□□□ 0.23
GGA3-215ENST00000582821 SLC25A27O95847 323 aa16.5■□□□□ 0.23
GGA3-215ENST00000582821 INHAP05111 366 aa16.5■□□□□ 0.23
GGA3-215ENST00000582821 ELNP15502 786 aa16.5■□□□□ 0.23
GGA3-215ENST00000582821 RGS2P41220 211 aa16.5■□□□□ 0.23
GGA3-215ENST00000582821 TMEM132BQ14DG7 1078 aa16.5■□□□□ 0.23
GGA3-215ENST00000582821 IMMTQ16891 758 aaKnown RBP16.5■□□□□ 0.23
GGA3-215ENST00000582821 LRRC47Q8N1G4 583 aaKnown RBP16.5■□□□□ 0.23
GGA3-215ENST00000582821 REPS2Q8NFH8 660 aa16.5■□□□□ 0.23
GGA3-215ENST00000582821 GMCL1Q96IK5 515 aa16.5■□□□□ 0.23
GGA3-215ENST00000582821 NUP88Q99567 741 aaPredicted RBP16.5■□□□□ 0.23
GGA3-215ENST00000582821 MROH8Q9H579 483 aa16.5■□□□□ 0.23
GGA3-215ENST00000582821 TOMM22Q9NS69 142 aa16.5■□□□□ 0.23
GGA3-215ENST00000582821 FEM1BQ9UK73 627 aa16.5■□□□□ 0.23
GGA3-215ENST00000582821 STX8Q9UNK0 236 aa16.5■□□□□ 0.23
GGA3-215ENST00000582821 HMGCRP04035 888 aa16.49■□□□□ 0.23
GGA3-215ENST00000582821 GJB1P08034 283 aa16.49■□□□□ 0.23
GGA3-215ENST00000582821 HOXC6P09630 235 aa16.49■□□□□ 0.23
GGA3-215ENST00000582821 FDX1P10109 184 aa16.49■□□□□ 0.23
GGA3-215ENST00000582821 BMP3P12645 472 aa16.49■□□□□ 0.23
GGA3-215ENST00000582821 CCL5P13501 91 aa16.49■□□□□ 0.23
GGA3-215ENST00000582821 CAPN2P17655 700 aa16.49■□□□□ 0.23
GGA3-215ENST00000582821 ERCC3P19447 782 aa16.49■□□□□ 0.23
GGA3-215ENST00000582821 CYP2B6P20813 491 aa16.49■□□□□ 0.23
GGA3-215ENST00000582821 MAP2K5Q13163 448 aa16.49■□□□□ 0.23
GGA3-215ENST00000582821 GRB14Q14449 540 aa16.49■□□□□ 0.23
GGA3-215ENST00000582821 RRP12Q5JTH9 1297 aaKnown RBP16.49■□□□□ 0.23
GGA3-215ENST00000582821 RIOX2Q8IUF8 465 aa16.49■□□□□ 0.23
GGA3-215ENST00000582821 ABRAQ8N0Z2 381 aa16.49■□□□□ 0.23
GGA3-215ENST00000582821 ESR2Q92731 530 aa16.49■□□□□ 0.23
GGA3-215ENST00000582821 CCDC136Q96JN2 1154 aa16.49■□□□□ 0.23
GGA3-215ENST00000582821 CWC22Q9HCG8 908 aaKnown RBP16.49■□□□□ 0.23
GGA3-215ENST00000582821 IVNS1ABPQ9Y6Y0 642 aa16.49■□□□□ 0.23
GGA3-215ENST00000582821 ATP2A1O14983 1001 aa16.48■□□□□ 0.23
GGA3-215ENST00000582821 NEFLP07196 543 aa16.48■□□□□ 0.23
GGA3-215ENST00000582821 TOP1P11387 765 aaKnown RBP16.48■□□□□ 0.23
GGA3-215ENST00000582821 EN2P19622 333 aaPredicted RBP16.48■□□□□ 0.23
GGA3-215ENST00000582821 COPB2P35606 906 aa16.48■□□□□ 0.23
GGA3-215ENST00000582821 STAT3P40763 770 aa16.48■□□□□ 0.23
GGA3-215ENST00000582821 CCDC178Q5BJE1 867 aa16.48■□□□□ 0.23
GGA3-215ENST00000582821 BMP2KLQ5H9B9 411 aa16.48■□□□□ 0.23
GGA3-215ENST00000582821 RCSD1Q6JBY9 416 aa16.48■□□□□ 0.23
GGA3-215ENST00000582821 NKX2-3Q8TAU0 364 aa16.48■□□□□ 0.23
GGA3-215ENST00000582821 RNF208Q9H0X6 261 aa16.48■□□□□ 0.23
GGA3-215ENST00000582821 ZNF214Q9UL59 606 aaPredicted RBP16.48■□□□□ 0.23
GGA3-215ENST00000582821 MYCP01106 439 aaPredicted RBP16.47■□□□□ 0.23
GGA3-215ENST00000582821 MCCP23508 829 aa16.47■□□□□ 0.23
GGA3-215ENST00000582821 SLC1A4P43007 532 aa16.47■□□□□ 0.23
GGA3-215ENST00000582821 GJA8P48165 433 aa16.47■□□□□ 0.23
GGA3-215ENST00000582821 PTH1RQ03431 593 aa16.47■□□□□ 0.23
GGA3-215ENST00000582821 PLS1Q14651 629 aa16.47■□□□□ 0.23
GGA3-215ENST00000582821 WDR78Q5VTH9 848 aa16.47■□□□□ 0.23
GGA3-215ENST00000582821 ERICH6BQ5W0A0 696 aa16.47■□□□□ 0.23
GGA3-215ENST00000582821 FAM160B2Q86V87 743 aa16.47■□□□□ 0.23
GGA3-215ENST00000582821 DGKHQ86XP1 1220 aa16.47■□□□□ 0.23
GGA3-215ENST00000582821 CHURC1Q8WUH1 139 aa16.47■□□□□ 0.23
GGA3-215ENST00000582821 TRIB2Q92519 343 aa16.47■□□□□ 0.23
GGA3-215ENST00000582821 ANKS1AQ92625 1134 aa16.47■□□□□ 0.23
GGA3-215ENST00000582821 APBA2Q99767 749 aa16.47■□□□□ 0.23
GGA3-215ENST00000582821 TMEM47Q9BQJ4 181 aa16.47■□□□□ 0.23
GGA3-215ENST00000582821 UNC93B1Q9H1C4 597 aa16.47■□□□□ 0.23
GGA3-215ENST00000582821 CNNM2Q9H8M5 875 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms