RNA–Protein interactions for RNA: ENST00000581761.5

MKS1-211, Transcript of Meckel syndrome, type 1, humanhuman

TSL 3

Gene MKS1, Length 812 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-211ENST00000581761 A0A1W2PQ64 194 aa16.83■□□□□ 0.28
MKS1-211ENST00000581761 A0A1W2PQD8 194 aa16.83■□□□□ 0.28
MKS1-211ENST00000581761 SPDYE2BA6NHP3 402 aa16.83■□□□□ 0.28
MKS1-211ENST00000581761 NR1I2O75469 434 aa16.83■□□□□ 0.28
MKS1-211ENST00000581761 SPDYE6P0CI01 402 aa16.83■□□□□ 0.28
MKS1-211ENST00000581761 RPS12P25398 132 aaKnown RBP16.83■□□□□ 0.28
MKS1-211ENST00000581761 NR5A1Q13285 461 aa16.83■□□□□ 0.28
MKS1-211ENST00000581761 DLGAP5Q15398 846 aa16.83■□□□□ 0.28
MKS1-211ENST00000581761 MAP3K11Q16584 847 aa16.83■□□□□ 0.28
MKS1-211ENST00000581761 PPP4R3BQ5MIZ7 849 aa16.83■□□□□ 0.28
MKS1-211ENST00000581761 ADALQ6DHV7 355 aa16.83■□□□□ 0.28
MKS1-211ENST00000581761 SAMD7Q7Z3H4 446 aa16.83■□□□□ 0.28
MKS1-211ENST00000581761 DNAJC5GQ8N7S2 189 aa16.83■□□□□ 0.28
MKS1-211ENST00000581761 JMYQ8N9B5 988 aa16.83■□□□□ 0.28
MKS1-211ENST00000581761 AGBL3Q8NEM8 1001 aa16.83■□□□□ 0.28
MKS1-211ENST00000581761 TRPM4Q8TD43 1214 aa16.83■□□□□ 0.28
MKS1-211ENST00000581761 MRPS27Q92552 414 aaKnown RBP16.83■□□□□ 0.28
MKS1-211ENST00000581761 CCDC17Q96LX7 622 aa16.83■□□□□ 0.28
MKS1-211ENST00000581761 TNMDQ9H2S6 317 aa16.83■□□□□ 0.28
MKS1-211ENST00000581761 GOLPH3LQ9H4A5 285 aa16.83■□□□□ 0.28
MKS1-211ENST00000581761 CLEC11AQ9Y240 323 aa16.83■□□□□ 0.28
MKS1-211ENST00000581761 SIPA1L1O43166 1804 aa16.82■□□□□ 0.28
MKS1-211ENST00000581761 TTLL1O95922 423 aa16.82■□□□□ 0.28
MKS1-211ENST00000581761 GOLGA8HP0CJ92 632 aa16.82■□□□□ 0.28
MKS1-211ENST00000581761 NLRP5P59047 1200 aa16.82■□□□□ 0.28
MKS1-211ENST00000581761 RILPL1Q5EBL4 403 aa16.82■□□□□ 0.28
MKS1-211ENST00000581761 LDHDQ86WU2 507 aa16.82■□□□□ 0.28
MKS1-211ENST00000581761 FOXP4Q8IVH2 680 aaPredicted RBP16.82■□□□□ 0.28
MKS1-211ENST00000581761 LRRC47Q8N1G4 583 aaKnown RBP16.82■□□□□ 0.28
MKS1-211ENST00000581761 OGFOD1Q8N543 542 aa16.82■□□□□ 0.28
MKS1-211ENST00000581761 PANK2Q9BZ23 570 aa16.82■□□□□ 0.28
MKS1-211ENST00000581761 DNAJC18Q9H819 358 aa16.82■□□□□ 0.28
MKS1-211ENST00000581761 ADARB2Q9NS39 739 aaKnown RBP16.82■□□□□ 0.28
MKS1-211ENST00000581761 COL2A1P02458 1487 aaPredicted RBP16.81■□□□□ 0.28
MKS1-211ENST00000581761 FAM196BA6NMK8 535 aa16.81■□□□□ 0.28
MKS1-211ENST00000581761 USP17L5A8MUK1 530 aa16.81■□□□□ 0.28
MKS1-211ENST00000581761 KLRF2D3W0D1 207 aa16.81■□□□□ 0.28
MKS1-211ENST00000581761 PPP6R2O75170 966 aa16.81■□□□□ 0.28
MKS1-211ENST00000581761 SLURP2P0DP57 97 aa16.81■□□□□ 0.28
MKS1-211ENST00000581761 MARCKSP29966 332 aaPredicted RBP16.81■□□□□ 0.28
MKS1-211ENST00000581761 ZNF280AP59817 542 aaPredicted RBP16.81■□□□□ 0.28
MKS1-211ENST00000581761 PTPAQ15257 358 aa16.81■□□□□ 0.28
MKS1-211ENST00000581761 CAMK4Q16566 473 aa16.81■□□□□ 0.28
MKS1-211ENST00000581761 SLC35G1Q2M3R5 365 aa16.81■□□□□ 0.28
MKS1-211ENST00000581761 CERKLQ49MI3 558 aaPredicted RBP16.81■□□□□ 0.28
MKS1-211ENST00000581761 USP17L2Q6R6M4 530 aa16.81■□□□□ 0.28
MKS1-211ENST00000581761 RASGRP2Q7LDG7 609 aa16.81■□□□□ 0.28
MKS1-211ENST00000581761 PNMA8AQ86V59 439 aaPredicted RBP16.81■□□□□ 0.28
MKS1-211ENST00000581761 CLEC10AQ8IUN9 316 aa16.81■□□□□ 0.28
MKS1-211ENST00000581761 SPZ1Q9BXG8 430 aa16.81■□□□□ 0.28
MKS1-211ENST00000581761 CABP5Q9NP86 173 aa16.81■□□□□ 0.28
MKS1-211ENST00000581761 SH3GLB2Q9NR46 395 aa16.81■□□□□ 0.28
MKS1-211ENST00000581761 ZNF70Q9UC06 446 aaPredicted RBP16.81■□□□□ 0.28
MKS1-211ENST00000581761 CLIP2Q9UDT6 1046 aa16.81■□□□□ 0.28
MKS1-211ENST00000581761 ATRNL1Q5VV63 1379 aa16.8■□□□□ 0.28
MKS1-211ENST00000581761 CLRN2A0PK11 232 aa16.8■□□□□ 0.28
MKS1-211ENST00000581761 TCP10L2B9ZVM9 353 aa16.8■□□□□ 0.28
MKS1-211ENST00000581761 TOB1P50616 345 aaPredicted RBP16.8■□□□□ 0.28
MKS1-211ENST00000581761 ATP2B2Q01814 1243 aa16.8■□□□□ 0.28
MKS1-211ENST00000581761 FAM160A1Q05DH4 1040 aa16.8■□□□□ 0.28
MKS1-211ENST00000581761 USP50Q70EL3 339 aaPredicted RBP16.8■□□□□ 0.28
MKS1-211ENST00000581761 GPKOWQ92917 476 aaPredicted RBP eCLIP16.8■□□□□ 0.28
MKS1-211ENST00000581761 NOL7Q9UMY1 257 aaKnown RBP16.8■□□□□ 0.28
MKS1-211ENST00000581761 GREB1LQ9C091 1923 aaPredicted RBP16.8■□□□□ 0.28
MKS1-211ENST00000581761 H7C1D1 291 aa16.79■□□□□ 0.28
MKS1-211ENST00000581761 CYTH3O43739 400 aa16.79■□□□□ 0.28
MKS1-211ENST00000581761 KINO60870 393 aaKnown RBP16.79■□□□□ 0.28
MKS1-211ENST00000581761 PDHBP11177 359 aa16.79■□□□□ 0.28
MKS1-211ENST00000581761 ATP2B1P20020 1258 aa16.79■□□□□ 0.28
MKS1-211ENST00000581761 CALML3P27482 149 aa16.79■□□□□ 0.28
MKS1-211ENST00000581761 SMARCA1P28370 1054 aa16.79■□□□□ 0.28
MKS1-211ENST00000581761 SPDYE2Q495Y8 402 aa16.79■□□□□ 0.28
MKS1-211ENST00000581761 TBC1D10BQ4KMP7 808 aaPredicted RBP16.79■□□□□ 0.28
MKS1-211ENST00000581761 ASPRV1Q53RT3 343 aa16.79■□□□□ 0.28
MKS1-211ENST00000581761 AXDND1Q5T1B0 1012 aaPredicted RBP16.79■□□□□ 0.28
MKS1-211ENST00000581761 RBM26Q5T8P6 1007 aaKnown RBP16.79■□□□□ 0.28
MKS1-211ENST00000581761 HEATR3Q7Z4Q2 680 aa16.79■□□□□ 0.28
MKS1-211ENST00000581761 MTMR14Q8NCE2 650 aa16.79■□□□□ 0.28
MKS1-211ENST00000581761 CCDC148Q8NFR7 591 aa16.79■□□□□ 0.28
MKS1-211ENST00000581761 RRP36Q96EU6 259 aaKnown RBP16.79■□□□□ 0.28
MKS1-211ENST00000581761 FUCA2Q9BTY2 467 aa16.79■□□□□ 0.28
MKS1-211ENST00000581761 CEP131Q9UPN4 1083 aa16.79■□□□□ 0.28
MKS1-211ENST00000581761 FRMPD2Q68DX3 1309 aaPredicted RBP16.78■□□□□ 0.28
MKS1-211ENST00000581761 A0A1B0GVL5 298 aa16.78■□□□□ 0.28
MKS1-211ENST00000581761 FAM205CA6NFA0 338 aa16.78■□□□□ 0.28
MKS1-211ENST00000581761 CTAGE5O15320 804 aa16.78■□□□□ 0.28
MKS1-211ENST00000581761 CUTAO60888 179 aa16.78■□□□□ 0.28
MKS1-211ENST00000581761 NPY5RQ15761 445 aa16.78■□□□□ 0.28
MKS1-211ENST00000581761 MAP1SQ66K74 1059 aaPredicted RBP16.78■□□□□ 0.28
MKS1-211ENST00000581761 WWC2Q6AWC2 1192 aa16.78■□□□□ 0.28
MKS1-211ENST00000581761 TATDN1Q6P1N9 297 aa16.78■□□□□ 0.28
MKS1-211ENST00000581761 METTL16Q86W50 562 aaKnown RBP16.78■□□□□ 0.28
MKS1-211ENST00000581761 CKAP2LQ8IYA6 745 aa16.78■□□□□ 0.28
MKS1-211ENST00000581761 RNF214Q8ND24 703 aa16.78■□□□□ 0.28
MKS1-211ENST00000581761 ENGASEQ8NFI3 743 aa16.78■□□□□ 0.28
MKS1-211ENST00000581761 TNFRSF25Q93038 417 aa16.78■□□□□ 0.28
MKS1-211ENST00000581761 CSRNP1Q96S65 589 aa16.78■□□□□ 0.28
MKS1-211ENST00000581761 CPVLQ9H3G5 476 aa16.78■□□□□ 0.28
MKS1-211ENST00000581761 VEZTQ9HBM0 779 aa16.78■□□□□ 0.28
MKS1-211ENST00000581761 PGAP2Q9UHJ9 254 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms