RNA–Protein interactions for RNA: ENST00000581394.1

TTC39C-207, Transcript of tetratricopeptide repeat domain 39C, humanhuman

TSL 3

Gene TTC39C, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-207ENST00000581394 ASCC2Q9H1I8 757 aaPredicted RBP6.93□□□□□ -1.3
TTC39C-207ENST00000581394 SIRT5Q9NXA8 310 aa6.93□□□□□ -1.3
TTC39C-207ENST00000581394 USP2O75604 605 aaPredicted RBP6.92□□□□□ -1.3
TTC39C-207ENST00000581394 SASH1O94885 1247 aa6.92□□□□□ -1.3
TTC39C-207ENST00000581394 HTR3BO95264 441 aa6.92□□□□□ -1.3
TTC39C-207ENST00000581394 F13A1P00488 732 aa6.92□□□□□ -1.3
TTC39C-207ENST00000581394 AFF3P51826 1226 aaKnown RBP6.92□□□□□ -1.3
TTC39C-207ENST00000581394 YBX1P67809 324 aaKnown RBP6.92□□□□□ -1.3
TTC39C-207ENST00000581394 NMIQ13287 307 aaPredicted RBP6.92□□□□□ -1.3
TTC39C-207ENST00000581394 DAGLBQ8NCG7 672 aa6.92□□□□□ -1.3
TTC39C-207ENST00000581394 KLHL3Q9UH77 587 aa6.92□□□□□ -1.3
TTC39C-207ENST00000581394 POLR3KQ9Y2Y1 108 aaPredicted RBP6.92□□□□□ -1.3
TTC39C-207ENST00000581394 USP31Q70CQ4 1352 aa6.92□□□□□ -1.3
TTC39C-207ENST00000581394 IRS4O14654 1257 aaPredicted RBP6.91□□□□□ -1.3
TTC39C-207ENST00000581394 PF4P02776 101 aa6.91□□□□□ -1.3
TTC39C-207ENST00000581394 RPL10P27635 214 aaKnown RBP6.91□□□□□ -1.3
TTC39C-207ENST00000581394 VIPR1P32241 457 aa6.91□□□□□ -1.3
TTC39C-207ENST00000581394 SLC14A2Q15849 920 aa6.91□□□□□ -1.3
TTC39C-207ENST00000581394 EAPPQ56P03 285 aaPredicted RBP6.91□□□□□ -1.3
TTC39C-207ENST00000581394 WAPLQ7Z5K2 1190 aa6.91□□□□□ -1.3
TTC39C-207ENST00000581394 PHACTR4Q8IZ21 702 aa6.91□□□□□ -1.3
TTC39C-207ENST00000581394 RHOVQ96L33 236 aa6.91□□□□□ -1.3
TTC39C-207ENST00000581394 KIF2CQ99661 725 aa6.91□□□□□ -1.3
TTC39C-207ENST00000581394 CNTD2Q9H8S5 307 aa6.91□□□□□ -1.3
TTC39C-207ENST00000581394 EPB41L4AQ9HCS5 686 aaPredicted RBP6.91□□□□□ -1.3
TTC39C-207ENST00000581394 ZMYM5Q9UJ78 669 aa6.91□□□□□ -1.3
TTC39C-207ENST00000581394 ADAMTS20P59510 1910 aa6.9□□□□□ -1.3
TTC39C-207ENST00000581394 OTOL1A6NHN0 477 aaPredicted RBP6.9□□□□□ -1.3
TTC39C-207ENST00000581394 SLC22A31A6NKX4 558 aa6.9□□□□□ -1.3
TTC39C-207ENST00000581394 DNAJA2O60884 412 aa6.9□□□□□ -1.3
TTC39C-207ENST00000581394 PNLIPP16233 465 aa6.9□□□□□ -1.3
TTC39C-207ENST00000581394 EPHB3P54753 998 aa6.9□□□□□ -1.3
TTC39C-207ENST00000581394 DAB2P98082 770 aa6.9□□□□□ -1.3
TTC39C-207ENST00000581394 ZNF655Q8N720 491 aaPredicted RBP6.9□□□□□ -1.3
TTC39C-207ENST00000581394 LINC00116Q8NCU8 138 aa6.9□□□□□ -1.3
TTC39C-207ENST00000581394 TCTN2Q96GX1 697 aa6.9□□□□□ -1.3
TTC39C-207ENST00000581394 FOXP3Q9BZS1 431 aa6.9□□□□□ -1.3
TTC39C-207ENST00000581394 TMEM82A0PJX8 343 aa6.89□□□□□ -1.31
TTC39C-207ENST00000581394 SUPT5HO00267 1087 aaKnown RBP6.89□□□□□ -1.31
TTC39C-207ENST00000581394 ABLIM1O14639 778 aa6.89□□□□□ -1.31
TTC39C-207ENST00000581394 RGS13O14921 159 aa6.89□□□□□ -1.31
TTC39C-207ENST00000581394 CTSHP09668 335 aa6.89□□□□□ -1.31
TTC39C-207ENST00000581394 GBP1P32455 592 aa6.89□□□□□ -1.31
TTC39C-207ENST00000581394 KRTAP10-2P60368 255 aa6.89□□□□□ -1.31
TTC39C-207ENST00000581394 ERVFRD-1P60508 538 aa6.89□□□□□ -1.31
TTC39C-207ENST00000581394 RNF4P78317 190 aa6.89□□□□□ -1.31
TTC39C-207ENST00000581394 SKOR2Q2VWA4 1001 aaPredicted RBP6.89□□□□□ -1.31
TTC39C-207ENST00000581394 OLFML2BQ68BL8 750 aa6.89□□□□□ -1.31
TTC39C-207ENST00000581394 CEP128Q6ZU80 1094 aa6.89□□□□□ -1.31
TTC39C-207ENST00000581394 HHIPL1Q96JK4 782 aa6.89□□□□□ -1.31
TTC39C-207ENST00000581394 PARP2Q9UGN5 583 aa6.89□□□□□ -1.31
TTC39C-207ENST00000581394 GRIN3BO60391 1043 aa6.88□□□□□ -1.31
TTC39C-207ENST00000581394 PCBP3P57721 371 aaKnown RBP6.88□□□□□ -1.31
TTC39C-207ENST00000581394 CHMP4BP1P59074 171 aa6.88□□□□□ -1.31
TTC39C-207ENST00000581394 MPP2Q14168 576 aa6.88□□□□□ -1.31
TTC39C-207ENST00000581394 TMEFF1Q8IYR6 380 aa6.88□□□□□ -1.31
TTC39C-207ENST00000581394 TCFL5Q9UL49 500 aa6.88□□□□□ -1.31
TTC39C-207ENST00000581394 CDR1P51861 262 aa6.87□□□□□ -1.31
TTC39C-207ENST00000581394 NFKB2Q00653 900 aa6.87□□□□□ -1.31
TTC39C-207ENST00000581394 PSMD2Q13200 908 aa6.87□□□□□ -1.31
TTC39C-207ENST00000581394 NBPF9Q3BBW0 867 aa6.87□□□□□ -1.31
TTC39C-207ENST00000581394 BBS9Q3SYG4 887 aa6.87□□□□□ -1.31
TTC39C-207ENST00000581394 SP8Q8IXZ3 490 aa6.87□□□□□ -1.31
TTC39C-207ENST00000581394 MZB1Q8WU39 189 aa6.87□□□□□ -1.31
TTC39C-207ENST00000581394 TMEM74Q96NL1 305 aa6.87□□□□□ -1.31
TTC39C-207ENST00000581394 PLCD4Q9BRC7 762 aa6.87□□□□□ -1.31
TTC39C-207ENST00000581394 RSRP1Q9BUV0 290 aa6.87□□□□□ -1.31
TTC39C-207ENST00000581394 SSU72P8A0A1W2PR75 194 aa6.86□□□□□ -1.31
TTC39C-207ENST00000581394 ANKRD33BA6NCL7 494 aa6.86□□□□□ -1.31
TTC39C-207ENST00000581394 F6X3S4 739 aa6.86□□□□□ -1.31
TTC39C-207ENST00000581394 UBOX5O94941 541 aa6.86□□□□□ -1.31
TTC39C-207ENST00000581394 CELA3BP08861 270 aa6.86□□□□□ -1.31
TTC39C-207ENST00000581394 ERICH6BQ5W0A0 696 aa6.86□□□□□ -1.31
TTC39C-207ENST00000581394 REC114Q7Z4M0 266 aa6.86□□□□□ -1.31
TTC39C-207ENST00000581394 FEZF2Q8TBJ5 459 aa6.86□□□□□ -1.31
TTC39C-207ENST00000581394 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.86□□□□□ -1.31
TTC39C-207ENST00000581394 RTP1P59025 263 aa6.85□□□□□ -1.31
TTC39C-207ENST00000581394 PWP1Q13610 501 aa6.85□□□□□ -1.31
TTC39C-207ENST00000581394 NBPF12Q5TAG4 269 aaPredicted RBP6.85□□□□□ -1.31
TTC39C-207ENST00000581394 CNKSR3Q6P9H4 555 aa6.85□□□□□ -1.31
TTC39C-207ENST00000581394 TMC4Q7Z404 712 aa6.85□□□□□ -1.31
TTC39C-207ENST00000581394 TMC3Q7Z5M5 1100 aa6.85□□□□□ -1.31
TTC39C-207ENST00000581394 PRRT2Q7Z6L0 340 aaPredicted RBP6.85□□□□□ -1.31
TTC39C-207ENST00000581394 FAM129CQ86XR2 697 aa6.85□□□□□ -1.31
TTC39C-207ENST00000581394 RELL1Q8IUW5 271 aa6.85□□□□□ -1.31
TTC39C-207ENST00000581394 FCRL2Q96LA5 508 aaPredicted RBP6.85□□□□□ -1.31
TTC39C-207ENST00000581394 KRTAP17-1Q9BYP8 105 aa6.85□□□□□ -1.31
TTC39C-207ENST00000581394 LUC7LQ9NQ29 371 aaKnown RBP6.85□□□□□ -1.31
TTC39C-207ENST00000581394 KLHL14Q9P2G3 628 aa6.85□□□□□ -1.31
TTC39C-207ENST00000581394 TNFRSF10DQ9UBN6 386 aa6.85□□□□□ -1.31
TTC39C-207ENST00000581394 FADS2P1A8MWK0 482 aa6.84□□□□□ -1.31
TTC39C-207ENST00000581394 SYPP08247 313 aa6.84□□□□□ -1.31
TTC39C-207ENST00000581394 SDHBP21912 280 aa6.84□□□□□ -1.31
TTC39C-207ENST00000581394 GBP2P32456 591 aaPredicted RBP6.84□□□□□ -1.31
TTC39C-207ENST00000581394 MLECQ14165 292 aa6.84□□□□□ -1.31
TTC39C-207ENST00000581394 GALNT18Q6P9A2 607 aa6.84□□□□□ -1.31
TTC39C-207ENST00000581394 TEPSINQ96N21 525 aa6.84□□□□□ -1.31
TTC39C-207ENST00000581394 MPOP05164 745 aa6.83□□□□□ -1.32
TTC39C-207ENST00000581394 ADRB1P08588 477 aa6.83□□□□□ -1.32
TTC39C-207ENST00000581394 GARTP22102 1010 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms