RNA–Protein interactions for RNA: ENST00000580533.1

SNORD3C-201, Transcript of small nucleolar RNA, C/D box 3C, humanhuman

BASIC

Gene SNORD3C, Length 581 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD3C-201ENST00000580533 SIAH1Q8IUQ4 282 aa13.69□□□□□ -0.22
SNORD3C-201ENST00000580533 GTF3C2Q8WUA4 911 aaPredicted RBP13.69□□□□□ -0.22
SNORD3C-201ENST00000580533 SNX21Q969T3 373 aa13.69□□□□□ -0.22
SNORD3C-201ENST00000580533 ZCCHC17Q9NP64 241 aaKnown RBP13.69□□□□□ -0.22
SNORD3C-201ENST00000580533 RBM27Q9P2N5 1060 aaKnown RBP13.69□□□□□ -0.22
SNORD3C-201ENST00000580533 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.69□□□□□ -0.22
SNORD3C-201ENST00000580533 FEM1BQ9UK73 627 aa13.69□□□□□ -0.22
SNORD3C-201ENST00000580533 PNMA2Q9UL42 364 aa13.69□□□□□ -0.22
SNORD3C-201ENST00000580533 SLC45A1Q9Y2W3 748 aa13.69□□□□□ -0.22
SNORD3C-201ENST00000580533 MYH4Q9Y623 1939 aa13.68□□□□□ -0.22
SNORD3C-201ENST00000580533 CCL15-CCL14A0A0B4J2E2 113 aa13.68□□□□□ -0.22
SNORD3C-201ENST00000580533 USP17L15C9J2P7 530 aa13.68□□□□□ -0.22
SNORD3C-201ENST00000580533 USP17L13C9JLJ4 530 aa13.68□□□□□ -0.22
SNORD3C-201ENST00000580533 USP17L11C9JVI0 530 aa13.68□□□□□ -0.22
SNORD3C-201ENST00000580533 USP17L18D6R9N7 530 aa13.68□□□□□ -0.22
SNORD3C-201ENST00000580533 USP17L22D6RA61 530 aa13.68□□□□□ -0.22
SNORD3C-201ENST00000580533 USP17L17D6RBQ6 530 aa13.68□□□□□ -0.22
SNORD3C-201ENST00000580533 USP17L19D6RCP7 530 aa13.68□□□□□ -0.22
SNORD3C-201ENST00000580533 USP17L20D6RJB6 530 aa13.68□□□□□ -0.22
SNORD3C-201ENST00000580533 SNHG28P0DPA3 235 aa13.68□□□□□ -0.22
SNORD3C-201ENST00000580533 FDX1P10109 184 aa13.68□□□□□ -0.22
SNORD3C-201ENST00000580533 PDHBP11177 359 aa13.68□□□□□ -0.22
SNORD3C-201ENST00000580533 HSPA6P17066 643 aa13.68□□□□□ -0.22
SNORD3C-201ENST00000580533 VCAM1P19320 739 aa13.68□□□□□ -0.22
SNORD3C-201ENST00000580533 STAT2P52630 851 aa13.68□□□□□ -0.22
SNORD3C-201ENST00000580533 USP17L24Q0WX57 530 aa13.68□□□□□ -0.22
SNORD3C-201ENST00000580533 TROAPQ12815 778 aa13.68□□□□□ -0.22
SNORD3C-201ENST00000580533 TRAF1Q13077 416 aa13.68□□□□□ -0.22
SNORD3C-201ENST00000580533 GRM4Q14833 912 aa13.68□□□□□ -0.22
SNORD3C-201ENST00000580533 CCL15Q16663 113 aa13.68□□□□□ -0.22
SNORD3C-201ENST00000580533 RTN1Q16799 776 aa13.68□□□□□ -0.22
SNORD3C-201ENST00000580533 CCDC84Q86UT8 332 aaPredicted RBP13.68□□□□□ -0.22
SNORD3C-201ENST00000580533 FANCBQ8NB91 859 aa13.68□□□□□ -0.22
SNORD3C-201ENST00000580533 CAPNS2Q96L46 248 aa13.68□□□□□ -0.22
SNORD3C-201ENST00000580533 TANGO6Q9C0B7 1094 aa13.68□□□□□ -0.22
SNORD3C-201ENST00000580533 AGTPBP1Q9UPW5 1226 aa13.68□□□□□ -0.22
SNORD3C-201ENST00000580533 MTMR7Q9Y216 660 aa13.68□□□□□ -0.22
SNORD3C-201ENST00000580533 CTDP1Q9Y5B0 961 aaPredicted RBP13.68□□□□□ -0.22
SNORD3C-201ENST00000580533 NID2Q14112 1375 aa13.68□□□□□ -0.22
SNORD3C-201ENST00000580533 MYPNQ86TC9 1320 aa13.67□□□□□ -0.22
SNORD3C-201ENST00000580533 PLA2G6O60733 806 aa13.67□□□□□ -0.22
SNORD3C-201ENST00000580533 ALDH1A1P00352 501 aa13.67□□□□□ -0.22
SNORD3C-201ENST00000580533 SMARCA1P28370 1054 aa13.67□□□□□ -0.22
SNORD3C-201ENST00000580533 PDIA3P30101 505 aaKnown RBP13.67□□□□□ -0.22
SNORD3C-201ENST00000580533 IRX3P78415 501 aaPredicted RBP13.67□□□□□ -0.22
SNORD3C-201ENST00000580533 AKAP17AQ02040 695 aaKnown RBP13.67□□□□□ -0.22
SNORD3C-201ENST00000580533 ZNF543Q08ER8 600 aa13.67□□□□□ -0.22
SNORD3C-201ENST00000580533 ANKRD23Q86SG2 305 aa13.67□□□□□ -0.22
SNORD3C-201ENST00000580533 SPICE1Q8N0Z3 855 aa13.67□□□□□ -0.22
SNORD3C-201ENST00000580533 NKX2-3Q8TAU0 364 aa13.67□□□□□ -0.22
SNORD3C-201ENST00000580533 CNKSR2Q8WXI2 1034 aa13.67□□□□□ -0.22
SNORD3C-201ENST00000580533 RPAP3Q9H6T3 665 aaPredicted RBP13.67□□□□□ -0.22
SNORD3C-201ENST00000580533 EMILIN3Q9NT22 766 aa13.67□□□□□ -0.22
SNORD3C-201ENST00000580533 HOXC10Q9NYD6 342 aa13.67□□□□□ -0.22
SNORD3C-201ENST00000580533 PHIPQ8WWQ0 1821 aa13.67□□□□□ -0.22
SNORD3C-201ENST00000580533 TESPA1A2RU30 521 aaPredicted RBP13.66□□□□□ -0.22
SNORD3C-201ENST00000580533 PFKFB2O60825 505 aa13.66□□□□□ -0.22
SNORD3C-201ENST00000580533 HOXA7P31268 230 aaPredicted RBP13.66□□□□□ -0.22
SNORD3C-201ENST00000580533 MAP2K2P36507 400 aa13.66□□□□□ -0.22
SNORD3C-201ENST00000580533 MKRN3Q13064 507 aaKnown RBP13.66□□□□□ -0.22
SNORD3C-201ENST00000580533 GRM1Q13255 1194 aa13.66□□□□□ -0.22
SNORD3C-201ENST00000580533 FAM83BQ5T0W9 1011 aa13.66□□□□□ -0.22
SNORD3C-201ENST00000580533 NOL8Q76FK4 1167 aaKnown RBP13.66□□□□□ -0.22
SNORD3C-201ENST00000580533 TRIM22Q8IYM9 498 aa13.66□□□□□ -0.22
SNORD3C-201ENST00000580533 PARK7Q99497 189 aaKnown RBP13.66□□□□□ -0.22
SNORD3C-201ENST00000580533 GPHNQ9NQX3 736 aaPredicted RBP13.66□□□□□ -0.22
SNORD3C-201ENST00000580533 DAXXQ9UER7 740 aaPredicted RBP13.66□□□□□ -0.22
SNORD3C-201ENST00000580533 BRPF3Q9ULD4 1205 aa13.66□□□□□ -0.22
SNORD3C-201ENST00000580533 TPCN1Q9ULQ1 816 aa13.66□□□□□ -0.22
SNORD3C-201ENST00000580533 KIF3AQ9Y496 699 aa13.66□□□□□ -0.22
SNORD3C-201ENST00000580533 PALM3A6NDB9 673 aaPredicted RBP13.65□□□□□ -0.22
SNORD3C-201ENST00000580533 FAM155AB1AL88 458 aaPredicted RBP13.65□□□□□ -0.22
SNORD3C-201ENST00000580533 TMEM232C9JQI7 657 aa13.65□□□□□ -0.22
SNORD3C-201ENST00000580533 KLRF2D3W0D1 207 aa13.65□□□□□ -0.22
SNORD3C-201ENST00000580533 K7ELQ4 463 aaPredicted RBP13.65□□□□□ -0.22
SNORD3C-201ENST00000580533 FLOT1O75955 427 aa13.65□□□□□ -0.22
SNORD3C-201ENST00000580533 HSP90AA1P07900 732 aaKnown RBP13.65□□□□□ -0.22
SNORD3C-201ENST00000580533 GJA5P36382 358 aa13.65□□□□□ -0.22
SNORD3C-201ENST00000580533 COG2Q14746 738 aa13.65□□□□□ -0.22
SNORD3C-201ENST00000580533 CYP4F22Q6NT55 531 aa13.65□□□□□ -0.22
SNORD3C-201ENST00000580533 MB21D1Q8N884 522 aa13.65□□□□□ -0.22
SNORD3C-201ENST00000580533 PRPF38AQ8NAV1 312 aaKnown RBP13.65□□□□□ -0.22
SNORD3C-201ENST00000580533 GTF3C6Q969F1 213 aa13.65□□□□□ -0.22
SNORD3C-201ENST00000580533 MS4A4AQ96JQ5 239 aa13.65□□□□□ -0.22
SNORD3C-201ENST00000580533 SLF1Q9BQI6 1058 aa13.65□□□□□ -0.22
SNORD3C-201ENST00000580533 SENP2Q9HC62 589 aa13.65□□□□□ -0.22
SNORD3C-201ENST00000580533 SEC63Q9UGP8 760 aaKnown RBP13.65□□□□□ -0.22
SNORD3C-201ENST00000580533 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.65□□□□□ -0.22
SNORD3C-201ENST00000580533 LOC285556D6RIA3 1793 aa13.65□□□□□ -0.22
SNORD3C-201ENST00000580533 WDR33Q9C0J8 1336 aaKnown RBP13.64□□□□□ -0.23
SNORD3C-201ENST00000580533 ZBED4O75132 1171 aa13.64□□□□□ -0.23
SNORD3C-201ENST00000580533 STK3Q13188 491 aa13.64□□□□□ -0.23
SNORD3C-201ENST00000580533 COL9A3Q14050 684 aaPredicted RBP13.64□□□□□ -0.23
SNORD3C-201ENST00000580533 BTNL9Q6UXG8 535 aa13.64□□□□□ -0.23
SNORD3C-201ENST00000580533 CATSPERGQ6ZRH7 1159 aa13.64□□□□□ -0.23
SNORD3C-201ENST00000580533 TMTC3Q6ZXV5 915 aa13.64□□□□□ -0.23
SNORD3C-201ENST00000580533 KCTD1Q719H9 257 aa13.64□□□□□ -0.23
SNORD3C-201ENST00000580533 SMCR8Q8TEV9 937 aaPredicted RBP13.64□□□□□ -0.23
SNORD3C-201ENST00000580533 WASF1Q92558 559 aa13.64□□□□□ -0.23
SNORD3C-201ENST00000580533 LLPHQ9BRT6 129 aaKnown RBP13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms