RNA–Protein interactions for RNA: ENST00000579662.5

ITGB4-206, Transcript of integrin subunit beta 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ITGB4, Length 5,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-206ENST00000579662 NLRP10Q86W26 655 aa16.85■□□□□ 0.29
ITGB4-206ENST00000579662 ZNF713Q8N859 430 aaPredicted RBP16.85■□□□□ 0.29
ITGB4-206ENST00000579662 CTTNBP2NLQ9P2B4 639 aa16.85■□□□□ 0.29
ITGB4-206ENST00000579662 FAM76AQ8TAV0 307 aa16.84■□□□□ 0.29
ITGB4-206ENST00000579662 PCDHA12Q9UN75 941 aa16.84■□□□□ 0.29
ITGB4-206ENST00000579662 M0QZ92 97 aa16.84■□□□□ 0.29
ITGB4-206ENST00000579662 ADD2P35612 726 aa16.84■□□□□ 0.29
ITGB4-206ENST00000579662 GPATCH4Q5T3I0 446 aaKnown RBP16.84■□□□□ 0.29
ITGB4-206ENST00000579662 KIAA0825Q8IV33 1275 aa16.84■□□□□ 0.29
ITGB4-206ENST00000579662 IFT20Q8IY31 132 aa16.84■□□□□ 0.29
ITGB4-206ENST00000579662 UBLCP1Q8WVY7 318 aaPredicted RBP16.84■□□□□ 0.29
ITGB4-206ENST00000579662 RNF26Q9BY78 433 aaPredicted RBP16.84■□□□□ 0.29
ITGB4-206ENST00000579662 CLTCL1P53675 1640 aa16.84■□□□□ 0.29
ITGB4-206ENST00000579662 P4HA1P13674 534 aa16.84■□□□□ 0.29
ITGB4-206ENST00000579662 SCNN1DP51172 638 aa16.84■□□□□ 0.29
ITGB4-206ENST00000579662 SLFN13Q68D06 897 aa16.84■□□□□ 0.29
ITGB4-206ENST00000579662 LRRC47Q8N1G4 583 aaKnown RBP16.84■□□□□ 0.29
ITGB4-206ENST00000579662 FAM204AQ9H8W3 233 aa16.84■□□□□ 0.29
ITGB4-206ENST00000579662 DDX25Q9UHL0 483 aaKnown RBP16.84■□□□□ 0.29
ITGB4-206ENST00000579662 A0A1W2PQ27 194 aa16.84■□□□□ 0.29
ITGB4-206ENST00000579662 A0A1W2PQ64 194 aa16.84■□□□□ 0.29
ITGB4-206ENST00000579662 A0A1W2PQD8 194 aa16.84■□□□□ 0.29
ITGB4-206ENST00000579662 N4BP1O75113 896 aaKnown RBP16.84■□□□□ 0.29
ITGB4-206ENST00000579662 KRBA2Q6ZNG9 492 aa16.84■□□□□ 0.29
ITGB4-206ENST00000579662 A2ML1A8K2U0 1454 aa16.84■□□□□ 0.29
ITGB4-206ENST00000579662 CAPN2P17655 700 aa16.83■□□□□ 0.29
ITGB4-206ENST00000579662 MXRA7P84157 204 aa16.83■□□□□ 0.29
ITGB4-206ENST00000579662 SCRN1Q12765 414 aa16.83■□□□□ 0.29
ITGB4-206ENST00000579662 ABCB5Q2M3G0 1257 aa16.83■□□□□ 0.29
ITGB4-206ENST00000579662 TEKT3Q9BXF9 490 aa16.83■□□□□ 0.29
ITGB4-206ENST00000579662 FOXP1Q9H334 677 aaPredicted RBP16.83■□□□□ 0.29
ITGB4-206ENST00000579662 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.83■□□□□ 0.29
ITGB4-206ENST00000579662 TLR7Q9NYK1 1049 aaKnown RBP16.83■□□□□ 0.29
ITGB4-206ENST00000579662 TMEM63CQ9P1W3 806 aa16.83■□□□□ 0.29
ITGB4-206ENST00000579662 VPS18Q9P253 973 aa16.83■□□□□ 0.29
ITGB4-206ENST00000579662 TRPM1Q7Z4N2 1603 aa16.83■□□□□ 0.29
ITGB4-206ENST00000579662 STK10O94804 968 aaKnown RBP16.83■□□□□ 0.29
ITGB4-206ENST00000579662 FMNL1O95466 1100 aaPredicted RBP16.83■□□□□ 0.29
ITGB4-206ENST00000579662 RBM6P78332 1123 aaKnown RBP16.83■□□□□ 0.29
ITGB4-206ENST00000579662 PRKG1Q13976 671 aa16.83■□□□□ 0.29
ITGB4-206ENST00000579662 PRR16Q569H4 304 aa16.83■□□□□ 0.29
ITGB4-206ENST00000579662 ZNF365Q70YC5 407 aa16.83■□□□□ 0.29
ITGB4-206ENST00000579662 PSMD1Q99460 953 aa16.83■□□□□ 0.29
ITGB4-206ENST00000579662 BCS1LQ9Y276 419 aa16.83■□□□□ 0.29
ITGB4-206ENST00000579662 TCP10L2B9ZVM9 353 aa16.83■□□□□ 0.28
ITGB4-206ENST00000579662 SERPINB2P05120 415 aa16.83■□□□□ 0.28
ITGB4-206ENST00000579662 MTX1Q13505 466 aa16.83■□□□□ 0.28
ITGB4-206ENST00000579662 DEPTORQ8TB45 409 aa16.83■□□□□ 0.28
ITGB4-206ENST00000579662 MAIP1Q8WWC4 291 aa16.83■□□□□ 0.28
ITGB4-206ENST00000579662 KCNJ18B7U540 433 aa16.83■□□□□ 0.28
ITGB4-206ENST00000579662 KCNJ12Q14500 433 aa16.83■□□□□ 0.28
ITGB4-206ENST00000579662 HACE1Q8IYU2 909 aa16.83■□□□□ 0.28
ITGB4-206ENST00000579662 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.83■□□□□ 0.28
ITGB4-206ENST00000579662 CUEDC2Q9H467 287 aa16.83■□□□□ 0.28
ITGB4-206ENST00000579662 TECP42680 631 aa16.83■□□□□ 0.28
ITGB4-206ENST00000579662 MORC3Q14149 939 aa16.83■□□□□ 0.28
ITGB4-206ENST00000579662 FBXO18Q8NFZ0 1043 aa16.83■□□□□ 0.28
ITGB4-206ENST00000579662 SMCR8Q8TEV9 937 aaPredicted RBP16.83■□□□□ 0.28
ITGB4-206ENST00000579662 SMC6Q96SB8 1091 aa16.83■□□□□ 0.28
ITGB4-206ENST00000579662 M0R2C6 588 aa16.82■□□□□ 0.28
ITGB4-206ENST00000579662 XRCC5P13010 732 aaKnown RBP16.82■□□□□ 0.28
ITGB4-206ENST00000579662 ERFEQ4G0M1 354 aa16.82■□□□□ 0.28
ITGB4-206ENST00000579662 CCDC121Q6ZUS5 278 aa16.82■□□□□ 0.28
ITGB4-206ENST00000579662 TRMT44Q8IYL2 757 aaKnown RBP16.82■□□□□ 0.28
ITGB4-206ENST00000579662 RTEL1Q9NZ71 1219 aa16.82■□□□□ 0.28
ITGB4-206ENST00000579662 POLA2Q14181 598 aa16.82■□□□□ 0.28
ITGB4-206ENST00000579662 CMTR1Q8N1G2 835 aaKnown RBP16.82■□□□□ 0.28
ITGB4-206ENST00000579662 TLDC2A0PJX2 215 aa16.82■□□□□ 0.28
ITGB4-206ENST00000579662 ZBTB16Q05516 673 aa16.82■□□□□ 0.28
ITGB4-206ENST00000579662 OGFRQ9NZT2 677 aa16.82■□□□□ 0.28
ITGB4-206ENST00000579662 PPP6R2O75170 966 aa16.82■□□□□ 0.28
ITGB4-206ENST00000579662 CCDC94Q9BW85 323 aaPredicted RBP16.82■□□□□ 0.28
ITGB4-206ENST00000579662 XPO4Q9C0E2 1151 aaKnown RBP16.82■□□□□ 0.28
ITGB4-206ENST00000579662 NKIRAS1Q9NYS0 192 aa16.82■□□□□ 0.28
ITGB4-206ENST00000579662 RSPH14Q9UHP6 348 aa16.82■□□□□ 0.28
ITGB4-206ENST00000579662 ALAS1P13196 640 aa16.81■□□□□ 0.28
ITGB4-206ENST00000579662 RAD51AP2Q09MP3 1159 aa16.81■□□□□ 0.28
ITGB4-206ENST00000579662 STAMQ92783 540 aa16.81■□□□□ 0.28
ITGB4-206ENST00000579662 SAMD15Q9P1V8 674 aa16.81■□□□□ 0.28
ITGB4-206ENST00000579662 PCDHA7Q9UN72 937 aa16.81■□□□□ 0.28
ITGB4-206ENST00000579662 RPAP1Q9BWH6 1393 aaPredicted RBP16.81■□□□□ 0.28
ITGB4-206ENST00000579662 E7EVH7 732 aa16.81■□□□□ 0.28
ITGB4-206ENST00000579662 UTP14CQ5TAP6 766 aaKnown RBP16.81■□□□□ 0.28
ITGB4-206ENST00000579662 NR1I2O75469 434 aa16.81■□□□□ 0.28
ITGB4-206ENST00000579662 ARL1P40616 181 aaPredicted RBP16.81■□□□□ 0.28
ITGB4-206ENST00000579662 DPY19L2Q6NUT2 758 aa16.81■□□□□ 0.28
ITGB4-206ENST00000579662 CPLX4Q7Z7G2 160 aa16.81■□□□□ 0.28
ITGB4-206ENST00000579662 GPKOWQ92917 476 aaPredicted RBP eCLIP16.81■□□□□ 0.28
ITGB4-206ENST00000579662 GLI2P10070 1586 aa16.81■□□□□ 0.28
ITGB4-206ENST00000579662 BTBD18B2RXH4 712 aa16.81■□□□□ 0.28
ITGB4-206ENST00000579662 ECM2O94769 699 aaPredicted RBP16.81■□□□□ 0.28
ITGB4-206ENST00000579662 GABPB2Q8TAK5 448 aaPredicted RBP16.81■□□□□ 0.28
ITGB4-206ENST00000579662 GLG1Q92896 1179 aa16.81■□□□□ 0.28
ITGB4-206ENST00000579662 TIGD1Q96MW7 591 aa16.81■□□□□ 0.28
ITGB4-206ENST00000579662 KCNK9Q9NPC2 374 aa16.81■□□□□ 0.28
ITGB4-206ENST00000579662 PANK4Q9NVE7 773 aa16.81■□□□□ 0.28
ITGB4-206ENST00000579662 TESPA1A2RU30 521 aaPredicted RBP16.8■□□□□ 0.28
ITGB4-206ENST00000579662 SMIM23A6NLE4 172 aa16.8■□□□□ 0.28
ITGB4-206ENST00000579662 EBAG9O00559 213 aa16.8■□□□□ 0.28
ITGB4-206ENST00000579662 PRPF6O94906 941 aaKnown RBP16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms