RNA–Protein interactions for RNA: ENST00000579483.1

MSI2-209, Transcript of musashi RNA binding protein 2, humanhuman

TSL 1 (best)

Gene MSI2, Length 5,141 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI2-209ENST00000579483 FAM160A1Q05DH4 1040 aa11.38□□□□□ -0.59
MSI2-209ENST00000579483 IFFO1Q0D2I5 559 aa11.38□□□□□ -0.59
MSI2-209ENST00000579483 PRR16Q569H4 304 aa11.38□□□□□ -0.59
MSI2-209ENST00000579483 SYDE2Q5VT97 1194 aa11.38□□□□□ -0.59
MSI2-209ENST00000579483 GTF3C2Q8WUA4 911 aaPredicted RBP11.38□□□□□ -0.59
MSI2-209ENST00000579483 CCDC42Q96M95 316 aa11.38□□□□□ -0.59
MSI2-209ENST00000579483 TMEM106CQ9BVX2 250 aa11.38□□□□□ -0.59
MSI2-209ENST00000579483 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.38□□□□□ -0.59
MSI2-209ENST00000579483 ZMYM6O95789 1325 aa11.38□□□□□ -0.59
MSI2-209ENST00000579483 UTP14CQ5TAP6 766 aaKnown RBP11.38□□□□□ -0.59
MSI2-209ENST00000579483 GABPB2Q8TAK5 448 aaPredicted RBP11.38□□□□□ -0.59
MSI2-209ENST00000579483 PLIN2Q99541 437 aa11.38□□□□□ -0.59
MSI2-209ENST00000579483 MIS12Q9H081 205 aa11.38□□□□□ -0.59
MSI2-209ENST00000579483 STAP2Q9UGK3 403 aa11.38□□□□□ -0.59
MSI2-209ENST00000579483 KCNH3Q9ULD8 1083 aa11.38□□□□□ -0.59
MSI2-209ENST00000579483 NDUFB9Q9Y6M9 179 aa11.38□□□□□ -0.59
MSI2-209ENST00000579483 SASH1O94885 1247 aa11.38□□□□□ -0.59
MSI2-209ENST00000579483 KRT5P13647 590 aa11.38□□□□□ -0.59
MSI2-209ENST00000579483 POLGP54098 1239 aaPredicted RBP11.38□□□□□ -0.59
MSI2-209ENST00000579483 MFSD14CQ5VZR4 134 aa11.38□□□□□ -0.59
MSI2-209ENST00000579483 WRNIP1Q96S55 665 aa11.38□□□□□ -0.59
MSI2-209ENST00000579483 CWC15Q9P013 229 aaKnown RBP11.38□□□□□ -0.59
MSI2-209ENST00000579483 CKAP4Q07065 602 aaKnown RBP11.38□□□□□ -0.59
MSI2-209ENST00000579483 POLA2Q14181 598 aa11.38□□□□□ -0.59
MSI2-209ENST00000579483 USP17L2Q6R6M4 530 aa11.38□□□□□ -0.59
MSI2-209ENST00000579483 MARCH10Q8NA82 808 aaPredicted RBP11.38□□□□□ -0.59
MSI2-209ENST00000579483 GIMAP8Q8ND71 665 aaPredicted RBP11.38□□□□□ -0.59
MSI2-209ENST00000579483 OTUD7AQ8TE49 926 aaPredicted RBP11.38□□□□□ -0.59
MSI2-209ENST00000579483 MRPL44Q9H9J2 332 aaKnown RBP11.38□□□□□ -0.59
MSI2-209ENST00000579483 PRAMEF22A3QJZ6 481 aa11.37□□□□□ -0.59
MSI2-209ENST00000579483 LAD1O00515 517 aa11.37□□□□□ -0.59
MSI2-209ENST00000579483 GDF11O95390 407 aa11.37□□□□□ -0.59
MSI2-209ENST00000579483 GNA14O95837 355 aa11.37□□□□□ -0.59
MSI2-209ENST00000579483 SLC7A3Q8WY07 619 aa11.37□□□□□ -0.59
MSI2-209ENST00000579483 ISCA1Q9BUE6 129 aa11.37□□□□□ -0.59
MSI2-209ENST00000579483 KCNH4Q9UQ05 1017 aa11.37□□□□□ -0.59
MSI2-209ENST00000579483 TNNC2P02585 160 aa11.37□□□□□ -0.59
MSI2-209ENST00000579483 ZSCAN20P17040 1043 aaPredicted RBP11.37□□□□□ -0.59
MSI2-209ENST00000579483 MECOMQ03112 1051 aa11.37□□□□□ -0.59
MSI2-209ENST00000579483 PTPN12Q05209 780 aaKnown RBP11.37□□□□□ -0.59
MSI2-209ENST00000579483 RNF169Q8NCN4 708 aa11.37□□□□□ -0.59
MSI2-209ENST00000579483 DCAF4Q8WV16 495 aa11.37□□□□□ -0.59
MSI2-209ENST00000579483 MYL10Q9BUA6 226 aa11.37□□□□□ -0.59
MSI2-209ENST00000579483 MAK16Q9BXY0 300 aaKnown RBP11.37□□□□□ -0.59
MSI2-209ENST00000579483 HERC5Q9UII4 1024 aaKnown RBP11.37□□□□□ -0.59
MSI2-209ENST00000579483 SYT1P21579 422 aa11.37□□□□□ -0.59
MSI2-209ENST00000579483 ECE1P42892 770 aa11.37□□□□□ -0.59
MSI2-209ENST00000579483 EP400NLQ6ZTU2 488 aa11.37□□□□□ -0.59
MSI2-209ENST00000579483 NSMCE1Q8WV22 266 aa11.37□□□□□ -0.59
MSI2-209ENST00000579483 LIG4P49917 911 aa11.37□□□□□ -0.59
MSI2-209ENST00000579483 UBXN1Q04323 297 aa11.37□□□□□ -0.59
MSI2-209ENST00000579483 TRIM14Q14142 442 aa11.37□□□□□ -0.59
MSI2-209ENST00000579483 NACC1Q96RE7 527 aa11.37□□□□□ -0.59
MSI2-209ENST00000579483 VPS54Q9P1Q0 977 aa11.37□□□□□ -0.59
MSI2-209ENST00000579483 PALD1Q9ULE6 856 aa11.37□□□□□ -0.59
MSI2-209ENST00000579483 GCNT3O95395 438 aa11.36□□□□□ -0.59
MSI2-209ENST00000579483 TUBB4AP04350 444 aa11.36□□□□□ -0.59
MSI2-209ENST00000579483 DNA2P51530 1060 aa11.36□□□□□ -0.59
MSI2-209ENST00000579483 KIF5AQ12840 1032 aa11.36□□□□□ -0.59
MSI2-209ENST00000579483 RBM46Q8TBY0 533 aaKnown RBP11.36□□□□□ -0.59
MSI2-209ENST00000579483 IQCDQ96DY2 449 aa11.36□□□□□ -0.59
MSI2-209ENST00000579483 DDX25Q9UHL0 483 aaKnown RBP11.36□□□□□ -0.59
MSI2-209ENST00000579483 CEP152O94986 1710 aa11.36□□□□□ -0.59
MSI2-209ENST00000579483 KRT86O43790 486 aa11.36□□□□□ -0.59
MSI2-209ENST00000579483 STAMBPO95630 424 aa11.36□□□□□ -0.59
MSI2-209ENST00000579483 BCRP11274 1271 aa11.36□□□□□ -0.59
MSI2-209ENST00000579483 TRAPPC10P48553 1259 aa11.36□□□□□ -0.59
MSI2-209ENST00000579483 DMP1Q13316 513 aaPredicted RBP11.36□□□□□ -0.59
MSI2-209ENST00000579483 FAM102BQ5T8I3 360 aa11.36□□□□□ -0.59
MSI2-209ENST00000579483 RGS22Q8NE09 1264 aa11.36□□□□□ -0.59
MSI2-209ENST00000579483 PHKBQ93100 1093 aa11.36□□□□□ -0.59
MSI2-209ENST00000579483 MTIF3Q9H2K0 278 aaKnown RBP11.36□□□□□ -0.59
MSI2-209ENST00000579483 LUC7L2Q9Y383 392 aaKnown RBP11.36□□□□□ -0.59
MSI2-209ENST00000579483 ATP6V0A2Q9Y487 856 aa11.36□□□□□ -0.59
MSI2-209ENST00000579483 COL4A3BPQ9Y5P4 624 aa11.36□□□□□ -0.59
MSI2-209ENST00000579483 N4BP1O75113 896 aaKnown RBP11.36□□□□□ -0.59
MSI2-209ENST00000579483 OR52Z1P0C646 297 aa11.36□□□□□ -0.59
MSI2-209ENST00000579483 STRIP1Q5VSL9 837 aa11.36□□□□□ -0.59
MSI2-209ENST00000579483 SPICE1Q8N0Z3 855 aa11.36□□□□□ -0.59
MSI2-209ENST00000579483 RIOK1Q9BRS2 568 aaKnown RBP11.36□□□□□ -0.59
MSI2-209ENST00000579483 CSRNP2Q9H175 543 aa11.36□□□□□ -0.59
MSI2-209ENST00000579483 SUGCTQ9HAC7 445 aa11.36□□□□□ -0.59
MSI2-209ENST00000579483 NCOA5Q9HCD5 579 aaKnown RBP11.36□□□□□ -0.59
MSI2-209ENST00000579483 PHLPP2Q6ZVD8 1323 aa11.36□□□□□ -0.59
MSI2-209ENST00000579483 USP17L10C9JJH3 530 aa11.36□□□□□ -0.59
MSI2-209ENST00000579483 KRT19P08727 400 aa11.36□□□□□ -0.59
MSI2-209ENST00000579483 MIGA2Q7L4E1 593 aa11.36□□□□□ -0.59
MSI2-209ENST00000579483 DYDC1Q8WWB3 177 aa11.36□□□□□ -0.59
MSI2-209ENST00000579483 RNF26Q9BY78 433 aaPredicted RBP11.36□□□□□ -0.59
MSI2-209ENST00000579483 FEM1BQ9UK73 627 aa11.36□□□□□ -0.59
MSI2-209ENST00000579483 ZHX2Q9Y6X8 837 aa11.36□□□□□ -0.59
MSI2-209ENST00000579483 ADAMTS13Q76LX8 1427 aa11.36□□□□□ -0.59
MSI2-209ENST00000579483 URI1O94763 535 aaPredicted RBP11.35□□□□□ -0.59
MSI2-209ENST00000579483 TGFB2P61812 414 aa11.35□□□□□ -0.59
MSI2-209ENST00000579483 POSTNQ15063 836 aa11.35□□□□□ -0.59
MSI2-209ENST00000579483 ZNF771Q7L3S4 317 aaPredicted RBP11.35□□□□□ -0.59
MSI2-209ENST00000579483 MLKLQ8NB16 471 aa11.35□□□□□ -0.59
MSI2-209ENST00000579483 CCDC77Q9BR77 488 aa11.35□□□□□ -0.59
MSI2-209ENST00000579483 JADE2Q9NQC1 790 aa11.35□□□□□ -0.59
MSI2-209ENST00000579483 CPDO75976 1380 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms