RNA–Protein interactions for RNA: ENST00000578904.1

CSNK1D-209, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 1,269 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-209ENST00000578904 FOXD4L1Q9NU39 408 aa16.21■□□□□ 0.19
CSNK1D-209ENST00000578904 NYAP2Q9P242 653 aa16.21■□□□□ 0.19
CSNK1D-209ENST00000578904 KCNH4Q9UQ05 1017 aa16.21■□□□□ 0.19
CSNK1D-209ENST00000578904 NID2Q14112 1375 aa16.21■□□□□ 0.19
CSNK1D-209ENST00000578904 USP17L10C9JJH3 530 aa16.2■□□□□ 0.18
CSNK1D-209ENST00000578904 CXCL11O14625 94 aa16.2■□□□□ 0.18
CSNK1D-209ENST00000578904 GTF2A2P52657 109 aa16.2■□□□□ 0.18
CSNK1D-209ENST00000578904 NOGQ13253 232 aa16.2■□□□□ 0.18
CSNK1D-209ENST00000578904 ZYXQ15942 572 aaKnown RBP16.2■□□□□ 0.18
CSNK1D-209ENST00000578904 TRIM22Q8IYM9 498 aa16.2■□□□□ 0.18
CSNK1D-209ENST00000578904 LRRC47Q8N1G4 583 aaKnown RBP16.2■□□□□ 0.18
CSNK1D-209ENST00000578904 FANCBQ8NB91 859 aa16.2■□□□□ 0.18
CSNK1D-209ENST00000578904 PNMA1Q8ND90 353 aa16.2■□□□□ 0.18
CSNK1D-209ENST00000578904 CLIP2Q9UDT6 1046 aa16.2■□□□□ 0.18
CSNK1D-209ENST00000578904 SYNPO2Q9UMS6 1093 aa16.2■□□□□ 0.18
CSNK1D-209ENST00000578904 WDR33Q9C0J8 1336 aaKnown RBP16.19■□□□□ 0.18
CSNK1D-209ENST00000578904 A0A1W2PRG0 241 aa16.19■□□□□ 0.18
CSNK1D-209ENST00000578904 NOVP48745 357 aa16.19■□□□□ 0.18
CSNK1D-209ENST00000578904 VEGFBP49765 207 aa16.19■□□□□ 0.18
CSNK1D-209ENST00000578904 USP14P54578 494 aa16.19■□□□□ 0.18
CSNK1D-209ENST00000578904 HMGCS2P54868 508 aa16.19■□□□□ 0.18
CSNK1D-209ENST00000578904 BACE1P56817 501 aa16.19■□□□□ 0.18
CSNK1D-209ENST00000578904 AKAP17AQ02040 695 aaKnown RBP16.19■□□□□ 0.18
CSNK1D-209ENST00000578904 WASF1Q92558 559 aa16.19■□□□□ 0.18
CSNK1D-209ENST00000578904 LZTS2Q9BRK4 669 aa16.19■□□□□ 0.18
CSNK1D-209ENST00000578904 KIAA1683Q9H0B3 1180 aa16.19■□□□□ 0.18
CSNK1D-209ENST00000578904 TMOD4Q9NZQ9 345 aa16.19■□□□□ 0.18
CSNK1D-209ENST00000578904 RBM27Q9P2N5 1060 aaKnown RBP16.19■□□□□ 0.18
CSNK1D-209ENST00000578904 PTPRFP10586 1907 aa16.18■□□□□ 0.18
CSNK1D-209ENST00000578904 CCL15-CCL14A0A0B4J2E2 113 aa16.18■□□□□ 0.18
CSNK1D-209ENST00000578904 A0A0G2JLL6 359 aaPredicted RBP16.18■□□□□ 0.18
CSNK1D-209ENST00000578904 MANSC4A6NHS7 340 aaPredicted RBP16.18■□□□□ 0.18
CSNK1D-209ENST00000578904 C19orf81C9J6K1 198 aa16.18■□□□□ 0.18
CSNK1D-209ENST00000578904 RAD21O60216 631 aa16.18■□□□□ 0.18
CSNK1D-209ENST00000578904 AOC2O75106 756 aa16.18■□□□□ 0.18
CSNK1D-209ENST00000578904 CETPP11597 493 aa16.18■□□□□ 0.18
CSNK1D-209ENST00000578904 GJB2P29033 226 aa16.18■□□□□ 0.18
CSNK1D-209ENST00000578904 CCL15Q16663 113 aa16.18■□□□□ 0.18
CSNK1D-209ENST00000578904 RCSD1Q6JBY9 416 aa16.18■□□□□ 0.18
CSNK1D-209ENST00000578904 USP17L2Q6R6M4 530 aa16.18■□□□□ 0.18
CSNK1D-209ENST00000578904 GADL1Q6ZQY3 521 aa16.18■□□□□ 0.18
CSNK1D-209ENST00000578904 PRRT2Q7Z6L0 340 aaPredicted RBP16.18■□□□□ 0.18
CSNK1D-209ENST00000578904 SIAH1Q8IUQ4 282 aa16.18■□□□□ 0.18
CSNK1D-209ENST00000578904 TMEM47Q9BQJ4 181 aa16.18■□□□□ 0.18
CSNK1D-209ENST00000578904 GOPCQ9HD26 462 aa16.18■□□□□ 0.18
CSNK1D-209ENST00000578904 HPS5Q9UPZ3 1129 aa16.18■□□□□ 0.18
CSNK1D-209ENST00000578904 TMX2Q9Y320 296 aa16.18■□□□□ 0.18
CSNK1D-209ENST00000578904 THSD7BQ9C0I4 1608 aa16.17■□□□□ 0.18
CSNK1D-209ENST00000578904 SSRP1Q08945 709 aaKnown RBP16.17■□□□□ 0.18
CSNK1D-209ENST00000578904 SREBF2Q12772 1141 aa16.17■□□□□ 0.18
CSNK1D-209ENST00000578904 TROAPQ12815 778 aa16.17■□□□□ 0.18
CSNK1D-209ENST00000578904 DGKZQ13574 1117 aa16.17■□□□□ 0.18
CSNK1D-209ENST00000578904 SH3D19Q5HYK7 790 aa16.17■□□□□ 0.18
CSNK1D-209ENST00000578904 MKL1Q969V6 931 aa16.17■□□□□ 0.18
CSNK1D-209ENST00000578904 MS4A4AQ96JQ5 239 aa16.17■□□□□ 0.18
CSNK1D-209ENST00000578904 VCPKMTQ9H867 229 aa16.17■□□□□ 0.18
CSNK1D-209ENST00000578904 SENP2Q9HC62 589 aa16.17■□□□□ 0.18
CSNK1D-209ENST00000578904 LOC285556D6RIA3 1793 aa16.17■□□□□ 0.18
CSNK1D-209ENST00000578904 PARP1P09874 1014 aaKnown RBP16.16■□□□□ 0.18
CSNK1D-209ENST00000578904 IFNAR1P17181 557 aa16.16■□□□□ 0.18
CSNK1D-209ENST00000578904 KIF23Q02241 960 aaPredicted RBP16.16■□□□□ 0.18
CSNK1D-209ENST00000578904 FASTKD5Q7L8L6 764 aaKnown RBP16.16■□□□□ 0.18
CSNK1D-209ENST00000578904 PROCA1Q8NCQ7 364 aaPredicted RBP16.16■□□□□ 0.18
CSNK1D-209ENST00000578904 RGS22Q8NE09 1264 aa16.16■□□□□ 0.18
CSNK1D-209ENST00000578904 NSUN7Q8NE18 718 aaKnown RBP16.16■□□□□ 0.18
CSNK1D-209ENST00000578904 SMARCC2Q8TAQ2 1214 aa16.16■□□□□ 0.18
CSNK1D-209ENST00000578904 BRI3BPQ8WY22 251 aa16.16■□□□□ 0.18
CSNK1D-209ENST00000578904 C12orf42Q96LP6 360 aa16.16■□□□□ 0.18
CSNK1D-209ENST00000578904 MYL10Q9BUA6 226 aa16.16■□□□□ 0.18
CSNK1D-209ENST00000578904 NCOA5Q9HCD5 579 aaKnown RBP16.16■□□□□ 0.18
CSNK1D-209ENST00000578904 PTPDC1A2A3K4 754 aa16.15■□□□□ 0.18
CSNK1D-209ENST00000578904 XBP1P17861 261 aa16.15■□□□□ 0.18
CSNK1D-209ENST00000578904 GRM4Q14833 912 aa16.15■□□□□ 0.18
CSNK1D-209ENST00000578904 ASPRV1Q53RT3 343 aa16.15■□□□□ 0.18
CSNK1D-209ENST00000578904 LARP1BQ659C4 914 aaKnown RBP16.15■□□□□ 0.18
CSNK1D-209ENST00000578904 CCDC144CPQ8IYA2 1237 aa16.15■□□□□ 0.18
CSNK1D-209ENST00000578904 SPICE1Q8N0Z3 855 aa16.15■□□□□ 0.18
CSNK1D-209ENST00000578904 GMCL1P1Q8NEA9 526 aa16.15■□□□□ 0.18
CSNK1D-209ENST00000578904 LPAR1Q92633 364 aa16.15■□□□□ 0.18
CSNK1D-209ENST00000578904 ZIC5Q96T25 663 aa16.15■□□□□ 0.18
CSNK1D-209ENST00000578904 EMILIN3Q9NT22 766 aa16.15■□□□□ 0.18
CSNK1D-209ENST00000578904 ORC3Q9UBD5 711 aaPredicted RBP16.15■□□□□ 0.18
CSNK1D-209ENST00000578904 MTMR7Q9Y216 660 aa16.15■□□□□ 0.18
CSNK1D-209ENST00000578904 STK36Q9NRP7 1315 aa16.15■□□□□ 0.18
CSNK1D-209ENST00000578904 F5H6K3 240 aa16.14■□□□□ 0.17
CSNK1D-209ENST00000578904 H3BQV1 296 aa16.14■□□□□ 0.17
CSNK1D-209ENST00000578904 NDUFB10O96000 172 aa16.14■□□□□ 0.17
CSNK1D-209ENST00000578904 VCAM1P19320 739 aa16.14■□□□□ 0.17
CSNK1D-209ENST00000578904 RXRAP19793 462 aa16.14■□□□□ 0.17
CSNK1D-209ENST00000578904 SMARCA1P28370 1054 aa16.14■□□□□ 0.17
CSNK1D-209ENST00000578904 ADD1P35611 737 aaKnown RBP16.14■□□□□ 0.17
CSNK1D-209ENST00000578904 MAP2K2P36507 400 aa16.14■□□□□ 0.17
CSNK1D-209ENST00000578904 KLRC3Q07444 240 aa16.14■□□□□ 0.17
CSNK1D-209ENST00000578904 TRIM29Q14134 588 aa16.14■□□□□ 0.17
CSNK1D-209ENST00000578904 GPATCH4Q5T3I0 446 aaKnown RBP16.14■□□□□ 0.17
CSNK1D-209ENST00000578904 SLFN13Q68D06 897 aa16.14■□□□□ 0.17
CSNK1D-209ENST00000578904 RAB11FIP4Q86YS3 637 aa16.14■□□□□ 0.17
CSNK1D-209ENST00000578904 REM2Q8IYK8 340 aaPredicted RBP16.14■□□□□ 0.17
CSNK1D-209ENST00000578904 RNF26Q9BY78 433 aaPredicted RBP16.14■□□□□ 0.17
CSNK1D-209ENST00000578904 ISY1Q9ULR0 285 aaKnown RBP16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms