RNA–Protein interactions for RNA: ENST00000578733.5

CDK5RAP3-210, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 578 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-210ENST00000578733 PDE4DIPQ5VU43 2346 aa13.17□□□□□ -0.3
CDK5RAP3-210ENST00000578733 CCL15-CCL14A0A0B4J2E2 113 aa13.16□□□□□ -0.3
CDK5RAP3-210ENST00000578733 KLF18A0A0U1RQI7 1052 aa13.16□□□□□ -0.3
CDK5RAP3-210ENST00000578733 CCDC196A0A1B0GTZ2 297 aa13.16□□□□□ -0.3
CDK5RAP3-210ENST00000578733 A0A1W2PRG0 241 aa13.16□□□□□ -0.3
CDK5RAP3-210ENST00000578733 ZBTB43O43298 467 aa13.16□□□□□ -0.3
CDK5RAP3-210ENST00000578733 BMP3P12645 472 aa13.16□□□□□ -0.3
CDK5RAP3-210ENST00000578733 KIF5BP33176 963 aa13.16□□□□□ -0.3
CDK5RAP3-210ENST00000578733 SLC1A4P43007 532 aa13.16□□□□□ -0.3
CDK5RAP3-210ENST00000578733 PPP2R5BQ15173 497 aa13.16□□□□□ -0.3
CDK5RAP3-210ENST00000578733 CCL15Q16663 113 aa13.16□□□□□ -0.3
CDK5RAP3-210ENST00000578733 CCDC96Q2M329 555 aa13.16□□□□□ -0.3
CDK5RAP3-210ENST00000578733 ZNF654Q8IZM8 581 aa13.16□□□□□ -0.3
CDK5RAP3-210ENST00000578733 NKX2-3Q8TAU0 364 aa13.16□□□□□ -0.3
CDK5RAP3-210ENST00000578733 NUP133Q8WUM0 1156 aa13.16□□□□□ -0.3
CDK5RAP3-210ENST00000578733 GMCL1Q96IK5 515 aa13.16□□□□□ -0.3
CDK5RAP3-210ENST00000578733 MAP3K14Q99558 947 aa13.16□□□□□ -0.3
CDK5RAP3-210ENST00000578733 PNMA3Q9UL41 463 aa13.16□□□□□ -0.3
CDK5RAP3-210ENST00000578733 MTMR7Q9Y216 660 aa13.16□□□□□ -0.3
CDK5RAP3-210ENST00000578733 NDUFB10O96000 172 aa13.15□□□□□ -0.3
CDK5RAP3-210ENST00000578733 PARP1P09874 1014 aaKnown RBP13.15□□□□□ -0.3
CDK5RAP3-210ENST00000578733 OSBPP22059 807 aa13.15□□□□□ -0.3
CDK5RAP3-210ENST00000578733 GNAQP50148 359 aa13.15□□□□□ -0.3
CDK5RAP3-210ENST00000578733 AK2P54819 239 aa13.15□□□□□ -0.3
CDK5RAP3-210ENST00000578733 IKQ13123 557 aaPredicted RBP13.15□□□□□ -0.3
CDK5RAP3-210ENST00000578733 ASPRV1Q53RT3 343 aa13.15□□□□□ -0.3
CDK5RAP3-210ENST00000578733 GPATCH4Q5T3I0 446 aaKnown RBP13.15□□□□□ -0.3
CDK5RAP3-210ENST00000578733 SIAH1Q8IUQ4 282 aa13.15□□□□□ -0.3
CDK5RAP3-210ENST00000578733 ZNF274Q96GC6 653 aaPredicted RBP13.15□□□□□ -0.3
CDK5RAP3-210ENST00000578733 ZCCHC17Q9NP64 241 aaKnown RBP13.15□□□□□ -0.3
CDK5RAP3-210ENST00000578733 RBM28Q9NW13 759 aaKnown RBP13.15□□□□□ -0.3
CDK5RAP3-210ENST00000578733 RLFQ13129 1914 aa13.14□□□□□ -0.31
CDK5RAP3-210ENST00000578733 GOLGA8BA8MQT2 603 aa13.14□□□□□ -0.31
CDK5RAP3-210ENST00000578733 FAM155AB1AL88 458 aaPredicted RBP13.14□□□□□ -0.31
CDK5RAP3-210ENST00000578733 USP17L15C9J2P7 530 aa13.14□□□□□ -0.31
CDK5RAP3-210ENST00000578733 USP17L13C9JLJ4 530 aa13.14□□□□□ -0.31
CDK5RAP3-210ENST00000578733 USP17L11C9JVI0 530 aa13.14□□□□□ -0.31
CDK5RAP3-210ENST00000578733 USP17L18D6R9N7 530 aa13.14□□□□□ -0.31
CDK5RAP3-210ENST00000578733 USP17L22D6RA61 530 aa13.14□□□□□ -0.31
CDK5RAP3-210ENST00000578733 USP17L17D6RBQ6 530 aa13.14□□□□□ -0.31
CDK5RAP3-210ENST00000578733 USP17L19D6RCP7 530 aa13.14□□□□□ -0.31
CDK5RAP3-210ENST00000578733 USP17L20D6RJB6 530 aa13.14□□□□□ -0.31
CDK5RAP3-210ENST00000578733 ALDH1A1P00352 501 aa13.14□□□□□ -0.31
CDK5RAP3-210ENST00000578733 PDHBP11177 359 aa13.14□□□□□ -0.31
CDK5RAP3-210ENST00000578733 VCAM1P19320 739 aa13.14□□□□□ -0.31
CDK5RAP3-210ENST00000578733 GJA5P36382 358 aa13.14□□□□□ -0.31
CDK5RAP3-210ENST00000578733 METAP2P50579 478 aaKnown RBP eCLIP13.14□□□□□ -0.31
CDK5RAP3-210ENST00000578733 APOBRQ0VD83 1088 aa13.14□□□□□ -0.31
CDK5RAP3-210ENST00000578733 USP17L24Q0WX57 530 aa13.14□□□□□ -0.31
CDK5RAP3-210ENST00000578733 CPLX2Q6PUV4 134 aaKnown RBP13.14□□□□□ -0.31
CDK5RAP3-210ENST00000578733 APOA5Q6Q788 366 aa13.14□□□□□ -0.31
CDK5RAP3-210ENST00000578733 ANKRD23Q86SG2 305 aa13.14□□□□□ -0.31
CDK5RAP3-210ENST00000578733 FAM160B2Q86V87 743 aa13.14□□□□□ -0.31
CDK5RAP3-210ENST00000578733 MICU3Q86XE3 530 aa13.14□□□□□ -0.31
CDK5RAP3-210ENST00000578733 CHURC1Q8WUH1 139 aa13.14□□□□□ -0.31
CDK5RAP3-210ENST00000578733 ZSCAN31Q96LW9 406 aaPredicted RBP13.14□□□□□ -0.31
CDK5RAP3-210ENST00000578733 LZTS2Q9BRK4 669 aa13.14□□□□□ -0.31
CDK5RAP3-210ENST00000578733 TANGO6Q9C0B7 1094 aa13.14□□□□□ -0.31
CDK5RAP3-210ENST00000578733 EMILIN3Q9NT22 766 aa13.14□□□□□ -0.31
CDK5RAP3-210ENST00000578733 SAGE1Q9NXZ1 904 aa13.14□□□□□ -0.31
CDK5RAP3-210ENST00000578733 FEM1BQ9UK73 627 aa13.14□□□□□ -0.31
CDK5RAP3-210ENST00000578733 AGTPBP1Q9UPW5 1226 aa13.14□□□□□ -0.31
CDK5RAP3-210ENST00000578733 SLC45A1Q9Y2W3 748 aa13.14□□□□□ -0.31
CDK5RAP3-210ENST00000578733 BAZ2BQ9UIF8 2168 aaKnown RBP13.14□□□□□ -0.31
CDK5RAP3-210ENST00000578733 TESPA1A2RU30 521 aaPredicted RBP13.13□□□□□ -0.31
CDK5RAP3-210ENST00000578733 GOLGA8AA7E2F4 631 aa13.13□□□□□ -0.31
CDK5RAP3-210ENST00000578733 DHX16O60231 1041 aaKnown RBP13.13□□□□□ -0.31
CDK5RAP3-210ENST00000578733 SNHG28P0DPA3 235 aa13.13□□□□□ -0.31
CDK5RAP3-210ENST00000578733 EVCP57679 992 aa13.13□□□□□ -0.31
CDK5RAP3-210ENST00000578733 IRX3P78415 501 aaPredicted RBP13.13□□□□□ -0.31
CDK5RAP3-210ENST00000578733 KIF23Q02241 960 aaPredicted RBP13.13□□□□□ -0.31
CDK5RAP3-210ENST00000578733 TROAPQ12815 778 aa13.13□□□□□ -0.31
CDK5RAP3-210ENST00000578733 TOB2Q14106 344 aaPredicted RBP13.13□□□□□ -0.31
CDK5RAP3-210ENST00000578733 GRM4Q14833 912 aa13.13□□□□□ -0.31
CDK5RAP3-210ENST00000578733 RTN1Q16799 776 aa13.13□□□□□ -0.31
CDK5RAP3-210ENST00000578733 FAM83BQ5T0W9 1011 aa13.13□□□□□ -0.31
CDK5RAP3-210ENST00000578733 SPICE1Q8N0Z3 855 aa13.13□□□□□ -0.31
CDK5RAP3-210ENST00000578733 GTF3C2Q8WUA4 911 aaPredicted RBP13.13□□□□□ -0.31
CDK5RAP3-210ENST00000578733 MS4A4AQ96JQ5 239 aa13.13□□□□□ -0.31
CDK5RAP3-210ENST00000578733 SLKQ9H2G2 1235 aaPredicted RBP13.13□□□□□ -0.31
CDK5RAP3-210ENST00000578733 RPAP3Q9H6T3 665 aaPredicted RBP13.13□□□□□ -0.31
CDK5RAP3-210ENST00000578733 GPHNQ9NQX3 736 aaPredicted RBP13.13□□□□□ -0.31
CDK5RAP3-210ENST00000578733 SH2B1Q9NRF2 756 aaPredicted RBP13.13□□□□□ -0.31
CDK5RAP3-210ENST00000578733 LIMCH1Q9UPQ0 1083 aa13.13□□□□□ -0.31
CDK5RAP3-210ENST00000578733 CTDP1Q9Y5B0 961 aaPredicted RBP13.13□□□□□ -0.31
CDK5RAP3-210ENST00000578733 MYPNQ86TC9 1320 aa13.13□□□□□ -0.31
CDK5RAP3-210ENST00000578733 RBBP6Q7Z6E9 1792 aaKnown RBP13.12□□□□□ -0.31
CDK5RAP3-210ENST00000578733 NID2Q14112 1375 aa13.12□□□□□ -0.31
CDK5RAP3-210ENST00000578733 PLA2G6O60733 806 aa13.12□□□□□ -0.31
CDK5RAP3-210ENST00000578733 FLOT1O75955 427 aa13.12□□□□□ -0.31
CDK5RAP3-210ENST00000578733 FDX1P10109 184 aa13.12□□□□□ -0.31
CDK5RAP3-210ENST00000578733 HOXA7P31268 230 aaPredicted RBP13.12□□□□□ -0.31
CDK5RAP3-210ENST00000578733 STAT2P52630 851 aa13.12□□□□□ -0.31
CDK5RAP3-210ENST00000578733 ZNF543Q08ER8 600 aa13.12□□□□□ -0.31
CDK5RAP3-210ENST00000578733 PRPF38BQ5VTL8 546 aaKnown RBP13.12□□□□□ -0.31
CDK5RAP3-210ENST00000578733 NOL8Q76FK4 1167 aaKnown RBP13.12□□□□□ -0.31
CDK5RAP3-210ENST00000578733 BRI3BPQ8WY22 251 aa13.12□□□□□ -0.31
CDK5RAP3-210ENST00000578733 PARK7Q99497 189 aaKnown RBP13.12□□□□□ -0.31
CDK5RAP3-210ENST00000578733 HOXC10Q9NYD6 342 aa13.12□□□□□ -0.31
CDK5RAP3-210ENST00000578733 A0A0G2JMZ2 1700 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms