RNA–Protein interactions for RNA: ENST00000578240.1

CTC1-203, Transcript of CST telomere replication complex component 1, humanhuman

TSL 2

Gene CTC1, Length 1,653 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-203ENST00000578240 ECE1P42892 770 aa15.2■□□□□ 0.02
CTC1-203ENST00000578240 ATP2B2Q01814 1243 aa15.2■□□□□ 0.02
CTC1-203ENST00000578240 KIAA1755Q5JYT7 1200 aa15.2■□□□□ 0.02
CTC1-203ENST00000578240 MCTP1Q6DN14 999 aa15.2■□□□□ 0.02
CTC1-203ENST00000578240 ACER1Q8TDN7 264 aa15.2■□□□□ 0.02
CTC1-203ENST00000578240 GLIS2Q9BZE0 524 aaPredicted RBP15.2■□□□□ 0.02
CTC1-203ENST00000578240 V9GY48 417 aaPredicted RBP15.2■□□□□ 0.02
CTC1-203ENST00000578240 TRPM7Q96QT4 1865 aa15.2■□□□□ 0.02
CTC1-203ENST00000578240 PFKFB3Q16875 520 aaPredicted RBP15.19■□□□□ 0.02
CTC1-203ENST00000578240 TYW1BQ6NUM6 668 aa15.19■□□□□ 0.02
CTC1-203ENST00000578240 GDPD2Q9HCC8 539 aa15.19■□□□□ 0.02
CTC1-203ENST00000578240 PPP2R3BQ9Y5P8 575 aa15.19■□□□□ 0.02
CTC1-203ENST00000578240 ADM5C9JUS6 153 aa15.19■□□□□ 0.02
CTC1-203ENST00000578240 ADAMTS3O15072 1205 aa15.19■□□□□ 0.02
CTC1-203ENST00000578240 MMP1P03956 469 aa15.19■□□□□ 0.02
CTC1-203ENST00000578240 INPP5BP32019 993 aa15.19■□□□□ 0.02
CTC1-203ENST00000578240 ASPRV1Q53RT3 343 aa15.19■□□□□ 0.02
CTC1-203ENST00000578240 GMCL1P1Q8NEA9 526 aa15.19■□□□□ 0.02
CTC1-203ENST00000578240 RIOX1Q9H6W3 641 aa15.19■□□□□ 0.02
CTC1-203ENST00000578240 LMBRD1Q9NUN5 540 aa15.19■□□□□ 0.02
CTC1-203ENST00000578240 VPS54Q9P1Q0 977 aa15.19■□□□□ 0.02
CTC1-203ENST00000578240 ZNF112Q9UJU3 913 aa15.19■□□□□ 0.02
CTC1-203ENST00000578240 KCNJ14Q9UNX9 436 aa15.19■□□□□ 0.02
CTC1-203ENST00000578240 DDX11L8A8MPP1 907 aa15.18■□□□□ 0.02
CTC1-203ENST00000578240 NDUFB10O96000 172 aa15.18■□□□□ 0.02
CTC1-203ENST00000578240 SCG2P13521 617 aa15.18■□□□□ 0.02
CTC1-203ENST00000578240 EPHX2P34913 555 aa15.18■□□□□ 0.02
CTC1-203ENST00000578240 GNAQP50148 359 aa15.18■□□□□ 0.02
CTC1-203ENST00000578240 PPP4R3BQ5MIZ7 849 aa15.18■□□□□ 0.02
CTC1-203ENST00000578240 TTBK2Q6IQ55 1244 aa15.18■□□□□ 0.02
CTC1-203ENST00000578240 TMEM87AQ8NBN3 555 aa15.18■□□□□ 0.02
CTC1-203ENST00000578240 PIBF1Q8WXW3 757 aa15.18■□□□□ 0.02
CTC1-203ENST00000578240 WASF1Q92558 559 aa15.18■□□□□ 0.02
CTC1-203ENST00000578240 GPKOWQ92917 476 aaPredicted RBP eCLIP15.18■□□□□ 0.02
CTC1-203ENST00000578240 PHF20Q9BVI0 1012 aa15.18■□□□□ 0.02
CTC1-203ENST00000578240 FTOQ9C0B1 505 aaKnown RBP eCLIP15.18■□□□□ 0.02
CTC1-203ENST00000578240 CABP5Q9NP86 173 aa15.18■□□□□ 0.02
CTC1-203ENST00000578240 A0A0G2JMZ2 1700 aa15.17■□□□□ 0.02
CTC1-203ENST00000578240 WWC2Q6AWC2 1192 aa15.17■□□□□ 0.02
CTC1-203ENST00000578240 KCTD1Q719H9 257 aa15.17■□□□□ 0.02
CTC1-203ENST00000578240 OXER1Q8TDS5 423 aa15.17■□□□□ 0.02
CTC1-203ENST00000578240 NUP88Q99567 741 aaPredicted RBP15.17■□□□□ 0.02
CTC1-203ENST00000578240 UBA5Q9GZZ9 404 aa15.17■□□□□ 0.02
CTC1-203ENST00000578240 ZSCAN16Q9H4T2 348 aaPredicted RBP15.17■□□□□ 0.02
CTC1-203ENST00000578240 TAF1DQ9H5J8 278 aaPredicted RBP15.17■□□□□ 0.02
CTC1-203ENST00000578240 SYNPO2Q9UMS6 1093 aa15.17■□□□□ 0.02
CTC1-203ENST00000578240 TMX2Q9Y320 296 aa15.17■□□□□ 0.02
CTC1-203ENST00000578240 CEP350Q5VT06 3117 aa15.17■□□□□ 0.02
CTC1-203ENST00000578240 F5H6K3 240 aa15.16■□□□□ 0.02
CTC1-203ENST00000578240 ASNSP08243 561 aa15.16■□□□□ 0.02
CTC1-203ENST00000578240 U2AF2P26368 475 aaKnown RBP eCLIP15.16■□□□□ 0.022e-8■■■■■ 31.7
CTC1-203ENST00000578240 SMARCA1P28370 1054 aa15.16■□□□□ 0.02
CTC1-203ENST00000578240 KLRC3Q07444 240 aa15.16■□□□□ 0.02
CTC1-203ENST00000578240 USP50Q70EL3 339 aaPredicted RBP15.16■□□□□ 0.02
CTC1-203ENST00000578240 DCAF4Q8WV16 495 aa15.16■□□□□ 0.02
CTC1-203ENST00000578240 GMCL1Q96IK5 515 aa15.16■□□□□ 0.02
CTC1-203ENST00000578240 LZTS2Q9BRK4 669 aa15.16■□□□□ 0.02
CTC1-203ENST00000578240 GPCPD1Q9NPB8 672 aa15.16■□□□□ 0.02
CTC1-203ENST00000578240 FIBPO43427 364 aa15.16■□□□□ 0.02
CTC1-203ENST00000578240 SLFN13Q68D06 897 aa15.16■□□□□ 0.02
CTC1-203ENST00000578240 TNFRSF25Q93038 417 aa15.16■□□□□ 0.02
CTC1-203ENST00000578240 MTMR8Q96EF0 704 aa15.16■□□□□ 0.02
CTC1-203ENST00000578240 PIGSQ96S52 555 aa15.16■□□□□ 0.02
CTC1-203ENST00000578240 ZNF341Q9BYN7 854 aa15.16■□□□□ 0.02
CTC1-203ENST00000578240 ATP6V1DQ9Y5K8 247 aa15.16■□□□□ 0.02
CTC1-203ENST00000578240 BTBD18B2RXH4 712 aa15.15■□□□□ 0.02
CTC1-203ENST00000578240 STXBP3O00186 592 aa15.15■□□□□ 0.02
CTC1-203ENST00000578240 CTNND1O60716 968 aaKnown RBP15.15■□□□□ 0.02
CTC1-203ENST00000578240 PPP1R11O60927 126 aaPredicted RBP15.15■□□□□ 0.02
CTC1-203ENST00000578240 POTEIP0CG38 1075 aa15.15■□□□□ 0.02
CTC1-203ENST00000578240 POTEJP0CG39 1038 aa15.15■□□□□ 0.02
CTC1-203ENST00000578240 SLC16A2P36021 539 aa15.15■□□□□ 0.02
CTC1-203ENST00000578240 NR5A1Q13285 461 aa15.15■□□□□ 0.02
CTC1-203ENST00000578240 CCDC96Q2M329 555 aa15.15■□□□□ 0.02
CTC1-203ENST00000578240 GPATCH4Q5T3I0 446 aaKnown RBP15.15■□□□□ 0.02
CTC1-203ENST00000578240 DCAF15Q66K64 600 aa15.15■□□□□ 0.02
CTC1-203ENST00000578240 CHADLQ6NUI6 762 aa15.15■□□□□ 0.02
CTC1-203ENST00000578240 DIS3L2Q8IYB7 885 aaKnown RBP15.15■□□□□ 0.02
CTC1-203ENST00000578240 KLRG1Q96E93 195 aa15.15■□□□□ 0.02
CTC1-203ENST00000578240 USP28Q96RU2 1077 aa15.15■□□□□ 0.02
CTC1-203ENST00000578240 WRNIP1Q96S55 665 aa15.15■□□□□ 0.02
CTC1-203ENST00000578240 JMJD4Q9H9V9 463 aa15.15■□□□□ 0.02
CTC1-203ENST00000578240 RBM27Q9P2N5 1060 aaKnown RBP15.15■□□□□ 0.02
CTC1-203ENST00000578240 FAM205CA6NFA0 338 aa15.14■□□□□ 0.01
CTC1-203ENST00000578240 LCTP09848 1927 aa15.14■□□□□ 0.01
CTC1-203ENST00000578240 SLC1A4P43007 532 aa15.14■□□□□ 0.01
CTC1-203ENST00000578240 AKAP17AQ02040 695 aaKnown RBP15.14■□□□□ 0.01
CTC1-203ENST00000578240 EAPPQ56P03 285 aaPredicted RBP15.14■□□□□ 0.01
CTC1-203ENST00000578240 NOM1Q5C9Z4 860 aaKnown RBP15.14■□□□□ 0.01
CTC1-203ENST00000578240 EARS2Q5JPH6 523 aaKnown RBP15.14■□□□□ 0.01
CTC1-203ENST00000578240 MYSM1Q5VVJ2 828 aa15.14■□□□□ 0.01
CTC1-203ENST00000578240 BRAPQ7Z569 592 aa15.14■□□□□ 0.01
CTC1-203ENST00000578240 LDHDQ86WU2 507 aa15.14■□□□□ 0.01
CTC1-203ENST00000578240 ADGRF4Q8IZF3 695 aa15.14■□□□□ 0.01
CTC1-203ENST00000578240 SPICE1Q8N0Z3 855 aa15.14■□□□□ 0.01
CTC1-203ENST00000578240 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.14■□□□□ 0.01
CTC1-203ENST00000578240 ZKSCAN4Q969J2 545 aaPredicted RBP15.14■□□□□ 0.01
CTC1-203ENST00000578240 ARHGEF10LQ9HCE6 1279 aa15.14■□□□□ 0.01
CTC1-203ENST00000578240 GADD45BO75293 160 aaPredicted RBP15.13■□□□□ 0.01
CTC1-203ENST00000578240 DGKZQ13574 1117 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms