RNA–Protein interactions for RNA: ENST00000577802.1

CDK5RAP3-205, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 415 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-205ENST00000577802 TRAF1Q13077 416 aa15.39■□□□□ 0.05
CDK5RAP3-205ENST00000577802 NTRK3Q16288 839 aa15.39■□□□□ 0.05
CDK5RAP3-205ENST00000577802 IFFO2Q5TF58 517 aa15.39■□□□□ 0.05
CDK5RAP3-205ENST00000577802 LARP1BQ659C4 914 aaKnown RBP15.39■□□□□ 0.05
CDK5RAP3-205ENST00000577802 ZNF280CQ8ND82 737 aa15.39■□□□□ 0.05
CDK5RAP3-205ENST00000577802 RRP36Q96EU6 259 aaKnown RBP15.39■□□□□ 0.05
CDK5RAP3-205ENST00000577802 DDX11Q96FC9 970 aa15.39■□□□□ 0.05
CDK5RAP3-205ENST00000577802 FAM217BQ9NTX9 383 aaPredicted RBP15.39■□□□□ 0.05
CDK5RAP3-205ENST00000577802 TRPM7Q96QT4 1865 aa15.39■□□□□ 0.05
CDK5RAP3-205ENST00000577802 UTRNP46939 3433 aa15.38■□□□□ 0.05
CDK5RAP3-205ENST00000577802 PRPF3O43395 683 aaKnown RBP15.38■□□□□ 0.05
CDK5RAP3-205ENST00000577802 STX6O43752 255 aa15.38■□□□□ 0.05
CDK5RAP3-205ENST00000577802 PLEKHA8P1O95397 391 aa15.38■□□□□ 0.05
CDK5RAP3-205ENST00000577802 NDUFB10O96000 172 aa15.38■□□□□ 0.05
CDK5RAP3-205ENST00000577802 BMP3P12645 472 aa15.38■□□□□ 0.05
CDK5RAP3-205ENST00000577802 JAG1P78504 1218 aa15.38■□□□□ 0.05
CDK5RAP3-205ENST00000577802 PRKG1Q13976 671 aa15.38■□□□□ 0.05
CDK5RAP3-205ENST00000577802 VGLL4Q14135 290 aa15.38■□□□□ 0.05
CDK5RAP3-205ENST00000577802 SHROOM1Q2M3G4 852 aaPredicted RBP15.38■□□□□ 0.05
CDK5RAP3-205ENST00000577802 USP17L2Q6R6M4 530 aa15.38■□□□□ 0.05
CDK5RAP3-205ENST00000577802 FAM160B2Q86V87 743 aa15.38■□□□□ 0.05
CDK5RAP3-205ENST00000577802 C2orf69Q8N8R5 385 aa15.38■□□□□ 0.05
CDK5RAP3-205ENST00000577802 CCDC12Q8WUD4 166 aaPredicted RBP15.38■□□□□ 0.05
CDK5RAP3-205ENST00000577802 ZKSCAN4Q969J2 545 aaPredicted RBP15.38■□□□□ 0.05
CDK5RAP3-205ENST00000577802 ATP6V1DQ9Y5K8 247 aa15.38■□□□□ 0.05
CDK5RAP3-205ENST00000577802 SNCAIPQ9Y6H5 919 aa15.38■□□□□ 0.05
CDK5RAP3-205ENST00000577802 PHIPQ8WWQ0 1821 aa15.38■□□□□ 0.05
CDK5RAP3-205ENST00000577802 POTEIP0CG38 1075 aa15.37■□□□□ 0.05
CDK5RAP3-205ENST00000577802 POTEJP0CG39 1038 aa15.37■□□□□ 0.05
CDK5RAP3-205ENST00000577802 STAT2P52630 851 aa15.37■□□□□ 0.05
CDK5RAP3-205ENST00000577802 PPATQ06203 517 aa15.37■□□□□ 0.05
CDK5RAP3-205ENST00000577802 IKQ13123 557 aaPredicted RBP15.37■□□□□ 0.05
CDK5RAP3-205ENST00000577802 ERO1BQ86YB8 467 aa15.37■□□□□ 0.05
CDK5RAP3-205ENST00000577802 CCDC148Q8NFR7 591 aa15.37■□□□□ 0.05
CDK5RAP3-205ENST00000577802 PHKBQ93100 1093 aa15.37■□□□□ 0.05
CDK5RAP3-205ENST00000577802 C8orf76Q96K31 380 aa15.37■□□□□ 0.05
CDK5RAP3-205ENST00000577802 ALG1Q9BT22 464 aa15.37■□□□□ 0.05
CDK5RAP3-205ENST00000577802 ZNF408Q9H9D4 720 aa15.37■□□□□ 0.05
CDK5RAP3-205ENST00000577802 GBA2Q9HCG7 927 aaPredicted RBP15.37■□□□□ 0.05
CDK5RAP3-205ENST00000577802 TMOD4Q9NZQ9 345 aa15.37■□□□□ 0.05
CDK5RAP3-205ENST00000577802 FRMPD2Q68DX3 1309 aaPredicted RBP15.37■□□□□ 0.05
CDK5RAP3-205ENST00000577802 LOC285556D6RIA3 1793 aa15.36■□□□□ 0.05
CDK5RAP3-205ENST00000577802 A0A1W2PRG0 241 aa15.36■□□□□ 0.05
CDK5RAP3-205ENST00000577802 VPS37CA5D8V6 355 aaPredicted RBP15.36■□□□□ 0.05
CDK5RAP3-205ENST00000577802 SPDYE5A6NIY4 337 aa15.36■□□□□ 0.05
CDK5RAP3-205ENST00000577802 PLA2G6O60733 806 aa15.36■□□□□ 0.05
CDK5RAP3-205ENST00000577802 SYT1P21579 422 aa15.36■□□□□ 0.05
CDK5RAP3-205ENST00000577802 ECE1P42892 770 aa15.36■□□□□ 0.05
CDK5RAP3-205ENST00000577802 BACE1P56817 501 aa15.36■□□□□ 0.05
CDK5RAP3-205ENST00000577802 MTMR2Q13614 643 aa15.36■□□□□ 0.05
CDK5RAP3-205ENST00000577802 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.36■□□□□ 0.05
CDK5RAP3-205ENST00000577802 NBPF11Q86T75 865 aa15.36■□□□□ 0.05
CDK5RAP3-205ENST00000577802 SIAH1Q8IUQ4 282 aa15.36■□□□□ 0.05
CDK5RAP3-205ENST00000577802 SRBD1Q8N5C6 995 aaKnown RBP15.36■□□□□ 0.05
CDK5RAP3-205ENST00000577802 SMC1BQ8NDV3 1235 aa15.36■□□□□ 0.05
CDK5RAP3-205ENST00000577802 CHURC1Q8WUH1 139 aa15.36■□□□□ 0.05
CDK5RAP3-205ENST00000577802 C12orf42Q96LP6 360 aa15.36■□□□□ 0.05
CDK5RAP3-205ENST00000577802 BRMS1Q9HCU9 246 aa15.36■□□□□ 0.05
CDK5RAP3-205ENST00000577802 FEM1BQ9UK73 627 aa15.36■□□□□ 0.05
CDK5RAP3-205ENST00000577802 PNMA2Q9UL42 364 aa15.36■□□□□ 0.05
CDK5RAP3-205ENST00000577802 ZHX2Q9Y6X8 837 aa15.36■□□□□ 0.05
CDK5RAP3-205ENST00000577802 GOLGA8HP0CJ92 632 aa15.35■□□□□ 0.05
CDK5RAP3-205ENST00000577802 SCG2P13521 617 aa15.35■□□□□ 0.05
CDK5RAP3-205ENST00000577802 FUT2Q10981 343 aa15.35■□□□□ 0.05
CDK5RAP3-205ENST00000577802 PPIL2Q13356 520 aa15.35■□□□□ 0.05
CDK5RAP3-205ENST00000577802 SAFBQ15424 915 aaKnown RBP eCLIP15.35■□□□□ 0.05
CDK5RAP3-205ENST00000577802 ZYXQ15942 572 aaKnown RBP15.35■□□□□ 0.05
CDK5RAP3-205ENST00000577802 PFKFB3Q16875 520 aaPredicted RBP15.35■□□□□ 0.05
CDK5RAP3-205ENST00000577802 STAG2Q8N3U4 1231 aa15.35■□□□□ 0.05
CDK5RAP3-205ENST00000577802 ACER1Q8TDN7 264 aa15.35■□□□□ 0.05
CDK5RAP3-205ENST00000577802 GPCPD1Q9NPB8 672 aa15.35■□□□□ 0.05
CDK5RAP3-205ENST00000577802 SH3GLB2Q9NR46 395 aa15.35■□□□□ 0.05
CDK5RAP3-205ENST00000577802 TRIM75PA6NK02 468 aa15.34■□□□□ 0.05
CDK5RAP3-205ENST00000577802 TRAF5O00463 557 aa15.34■□□□□ 0.05
CDK5RAP3-205ENST00000577802 CELF2O95319 508 aaKnown RBP15.34■□□□□ 0.05
CDK5RAP3-205ENST00000577802 FDX1P10109 184 aa15.34■□□□□ 0.05
CDK5RAP3-205ENST00000577802 SPP2Q13103 211 aa15.34■□□□□ 0.05
CDK5RAP3-205ENST00000577802 LDLRAD1Q5T700 205 aa15.34■□□□□ 0.05
CDK5RAP3-205ENST00000577802 PPP1R18Q6NYC8 613 aa15.34■□□□□ 0.05
CDK5RAP3-205ENST00000577802 BTNL9Q6UXG8 535 aa15.34■□□□□ 0.05
CDK5RAP3-205ENST00000577802 KCTD1Q719H9 257 aa15.34■□□□□ 0.05
CDK5RAP3-205ENST00000577802 CCDC82Q8N4S0 544 aa15.34■□□□□ 0.05
CDK5RAP3-205ENST00000577802 RIOX1Q9H6W3 641 aa15.34■□□□□ 0.05
CDK5RAP3-205ENST00000577802 ELP3Q9H9T3 547 aa15.34■□□□□ 0.05
CDK5RAP3-205ENST00000577802 TMEM232C9JQI7 657 aa15.33■□□□□ 0.04
CDK5RAP3-205ENST00000577802 CXCL11O14625 94 aa15.33■□□□□ 0.04
CDK5RAP3-205ENST00000577802 BRD1O95696 1058 aa15.33■□□□□ 0.04
CDK5RAP3-205ENST00000577802 ZSCAN22P10073 491 aaPredicted RBP15.33■□□□□ 0.04
CDK5RAP3-205ENST00000577802 FDPSP14324 419 aaKnown RBP15.33■□□□□ 0.04
CDK5RAP3-205ENST00000577802 CALML3P27482 149 aa15.33■□□□□ 0.04
CDK5RAP3-205ENST00000577802 GNL2Q13823 731 aaKnown RBP15.33■□□□□ 0.04
CDK5RAP3-205ENST00000577802 SH3D19Q5HYK7 790 aa15.33■□□□□ 0.04
CDK5RAP3-205ENST00000577802 FAM83BQ5T0W9 1011 aa15.33■□□□□ 0.04
CDK5RAP3-205ENST00000577802 SYDE2Q5VT97 1194 aa15.33■□□□□ 0.04
CDK5RAP3-205ENST00000577802 GALNT17Q6IS24 598 aa15.33■□□□□ 0.04
CDK5RAP3-205ENST00000577802 SPICE1Q8N0Z3 855 aa15.33■□□□□ 0.04
CDK5RAP3-205ENST00000577802 CMTR1Q8N1G2 835 aaKnown RBP15.33■□□□□ 0.04
CDK5RAP3-205ENST00000577802 PROCA1Q8NCQ7 364 aaPredicted RBP15.33■□□□□ 0.04
CDK5RAP3-205ENST00000577802 TANGO6Q9C0B7 1094 aa15.33■□□□□ 0.04
CDK5RAP3-205ENST00000577802 ZSCAN16Q9H4T2 348 aaPredicted RBP15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms