RNA–Protein interactions for RNA: ENST00000577681.1

CCL13-202, Transcript of C-C motif chemokine ligand 13, humanhuman

TSL 1 (best)

Gene CCL13, Length 669 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13-202ENST00000577681 ARHGEF10LQ9HCE6 1279 aa9.41□□□□□ -0.9
CCL13-202ENST00000577681 SAGE1Q9NXZ1 904 aa9.41□□□□□ -0.9
CCL13-202ENST00000577681 SLC45A1Q9Y2W3 748 aa9.41□□□□□ -0.9
CCL13-202ENST00000577681 ZHX2Q9Y6X8 837 aa9.41□□□□□ -0.9
CCL13-202ENST00000577681 SNHG28P0DPA3 235 aa9.4□□□□□ -0.9
CCL13-202ENST00000577681 TOP1P11387 765 aaKnown RBP9.4□□□□□ -0.9
CCL13-202ENST00000577681 CETPP11597 493 aa9.4□□□□□ -0.9
CCL13-202ENST00000577681 EEF2P13639 858 aaKnown RBP9.4□□□□□ -0.9
CCL13-202ENST00000577681 HOXA7P31268 230 aaPredicted RBP9.4□□□□□ -0.9
CCL13-202ENST00000577681 GTF2A2P52657 109 aa9.4□□□□□ -0.9
CCL13-202ENST00000577681 RCAN1P53805 252 aa9.4□□□□□ -0.9
CCL13-202ENST00000577681 USP14P54578 494 aa9.4□□□□□ -0.9
CCL13-202ENST00000577681 ICA1Q05084 483 aa9.4□□□□□ -0.9
CCL13-202ENST00000577681 MKRN3Q13064 507 aaKnown RBP9.4□□□□□ -0.9
CCL13-202ENST00000577681 SPP2Q13103 211 aa9.4□□□□□ -0.9
CCL13-202ENST00000577681 SNAPC2Q13487 334 aa9.4□□□□□ -0.9
CCL13-202ENST00000577681 SHROOM1Q2M3G4 852 aaPredicted RBP9.4□□□□□ -0.9
CCL13-202ENST00000577681 FAM47AQ5JRC9 791 aa9.4□□□□□ -0.9
CCL13-202ENST00000577681 USP17L2Q6R6M4 530 aa9.4□□□□□ -0.9
CCL13-202ENST00000577681 FASTKD5Q7L8L6 764 aaKnown RBP9.4□□□□□ -0.9
CCL13-202ENST00000577681 CTU1Q7Z7A3 348 aaKnown RBP9.4□□□□□ -0.9
CCL13-202ENST00000577681 SGMS1Q86VZ5 419 aa9.4□□□□□ -0.9
CCL13-202ENST00000577681 ENAHQ8N8S7 591 aaPredicted RBP9.4□□□□□ -0.9
CCL13-202ENST00000577681 KIF2CQ99661 725 aa9.4□□□□□ -0.9
CCL13-202ENST00000577681 CFHR5Q9BXR6 569 aa9.4□□□□□ -0.9
CCL13-202ENST00000577681 VCPKMTQ9H867 229 aa9.4□□□□□ -0.9
CCL13-202ENST00000577681 UPF2Q9HAU5 1272 aaKnown RBP9.4□□□□□ -0.9
CCL13-202ENST00000577681 RNF186Q9NXI6 227 aa9.4□□□□□ -0.9
CCL13-202ENST00000577681 CASP8AP2Q9UKL3 1982 aa9.4□□□□□ -0.9
CCL13-202ENST00000577681 TNKSO95271 1327 aa9.39□□□□□ -0.91
CCL13-202ENST00000577681 MPHOSPH10O00566 681 aaKnown RBP9.39□□□□□ -0.91
CCL13-202ENST00000577681 PRC1O43663 620 aa9.39□□□□□ -0.91
CCL13-202ENST00000577681 PLA2G6O60733 806 aa9.39□□□□□ -0.91
CCL13-202ENST00000577681 RPS6KB1P23443 525 aa9.39□□□□□ -0.91
CCL13-202ENST00000577681 SART3Q15020 963 aaKnown RBP9.39□□□□□ -0.91
CCL13-202ENST00000577681 RAB3GAP1Q15042 981 aa9.39□□□□□ -0.91
CCL13-202ENST00000577681 RRP12Q5JTH9 1297 aaKnown RBP9.39□□□□□ -0.91
CCL13-202ENST00000577681 BLOC1S2Q6QNY1 142 aa9.39□□□□□ -0.91
CCL13-202ENST00000577681 RUFY3Q7L099 469 aa9.39□□□□□ -0.91
CCL13-202ENST00000577681 ACER1Q8TDN7 264 aa9.39□□□□□ -0.91
CCL13-202ENST00000577681 OTUD5Q96G74 571 aa9.39□□□□□ -0.91
CCL13-202ENST00000577681 GMCL1Q96IK5 515 aa9.39□□□□□ -0.91
CCL13-202ENST00000577681 TMEM47Q9BQJ4 181 aa9.39□□□□□ -0.91
CCL13-202ENST00000577681 EMILIN3Q9NT22 766 aa9.39□□□□□ -0.91
CCL13-202ENST00000577681 MYPNQ86TC9 1320 aa9.38□□□□□ -0.91
CCL13-202ENST00000577681 F5H6K3 240 aa9.38□□□□□ -0.91
CCL13-202ENST00000577681 SH2B2O14492 632 aaPredicted RBP9.38□□□□□ -0.91
CCL13-202ENST00000577681 KLRC3Q07444 240 aa9.38□□□□□ -0.91
CCL13-202ENST00000577681 SREBF2Q12772 1141 aa9.38□□□□□ -0.91
CCL13-202ENST00000577681 COL9A3Q14050 684 aaPredicted RBP9.38□□□□□ -0.91
CCL13-202ENST00000577681 PPP2R5BQ15173 497 aa9.38□□□□□ -0.91
CCL13-202ENST00000577681 GPAT2Q6NUI2 795 aa9.38□□□□□ -0.91
CCL13-202ENST00000577681 ANKRD23Q86SG2 305 aa9.38□□□□□ -0.91
CCL13-202ENST00000577681 STK11IPQ8N1F8 1099 aa9.38□□□□□ -0.91
CCL13-202ENST00000577681 JAKMIP1Q96N16 626 aaKnown RBP9.38□□□□□ -0.91
CCL13-202ENST00000577681 UBAC1Q9BSL1 405 aa9.38□□□□□ -0.91
CCL13-202ENST00000577681 LY9Q9HBG7 655 aa9.38□□□□□ -0.91
CCL13-202ENST00000577681 GOPCQ9HD26 462 aa9.38□□□□□ -0.91
CCL13-202ENST00000577681 TOMM22Q9NS69 142 aa9.38□□□□□ -0.91
CCL13-202ENST00000577681 CLIP2Q9UDT6 1046 aa9.38□□□□□ -0.91
CCL13-202ENST00000577681 AGTPBP1Q9UPW5 1226 aa9.38□□□□□ -0.91
CCL13-202ENST00000577681 CYP46A1Q9Y6A2 500 aa9.38□□□□□ -0.91
CCL13-202ENST00000577681 NID2Q14112 1375 aa9.37□□□□□ -0.91
CCL13-202ENST00000577681 ERICH2A1L162 156 aa9.37□□□□□ -0.91
CCL13-202ENST00000577681 IFIT3O14879 490 aaKnown RBP9.37□□□□□ -0.91
CCL13-202ENST00000577681 WDR46O15213 610 aaKnown RBP9.37□□□□□ -0.91
CCL13-202ENST00000577681 NMT2O60551 498 aa9.37□□□□□ -0.91
CCL13-202ENST00000577681 ALDH1A1P00352 501 aa9.37□□□□□ -0.91
CCL13-202ENST00000577681 CASTP20810 708 aaKnown RBP9.37□□□□□ -0.91
CCL13-202ENST00000577681 SMARCA1P28370 1054 aa9.37□□□□□ -0.91
CCL13-202ENST00000577681 TROAPQ12815 778 aa9.37□□□□□ -0.91
CCL13-202ENST00000577681 MTMR2Q13614 643 aa9.37□□□□□ -0.91
CCL13-202ENST00000577681 WTAPQ15007 396 aa9.37□□□□□ -0.91
CCL13-202ENST00000577681 TMEM67Q5HYA8 995 aa9.37□□□□□ -0.91
CCL13-202ENST00000577681 BTNL9Q6UXG8 535 aa9.37□□□□□ -0.91
CCL13-202ENST00000577681 LBX2Q6XYB7 198 aa9.37□□□□□ -0.91
CCL13-202ENST00000577681 DCAF4Q8WV16 495 aa9.37□□□□□ -0.91
CCL13-202ENST00000577681 BRI3BPQ8WY22 251 aa9.37□□□□□ -0.91
CCL13-202ENST00000577681 PTPN18Q99952 460 aa9.37□□□□□ -0.91
CCL13-202ENST00000577681 MFRPQ9BY79 579 aa9.37□□□□□ -0.91
CCL13-202ENST00000577681 OCEL1Q9H607 264 aa9.37□□□□□ -0.91
CCL13-202ENST00000577681 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.37□□□□□ -0.91
CCL13-202ENST00000577681 ADAMTS5Q9UNA0 930 aa9.37□□□□□ -0.91
CCL13-202ENST00000577681 STX8Q9UNK0 236 aa9.37□□□□□ -0.91
CCL13-202ENST00000577681 HPS5Q9UPZ3 1129 aa9.37□□□□□ -0.91
CCL13-202ENST00000577681 TRIM75PA6NK02 468 aa9.36□□□□□ -0.91
CCL13-202ENST00000577681 DDAH1O94760 285 aa9.36□□□□□ -0.91
CCL13-202ENST00000577681 NDUFB10O96000 172 aa9.36□□□□□ -0.91
CCL13-202ENST00000577681 CALM1P0DP23 149 aa9.36□□□□□ -0.91
CCL13-202ENST00000577681 CALM2P0DP24 149 aa9.36□□□□□ -0.91
CCL13-202ENST00000577681 CALM3P0DP25 149 aa9.36□□□□□ -0.91
CCL13-202ENST00000577681 FDX1P10109 184 aa9.36□□□□□ -0.91
CCL13-202ENST00000577681 PDHBP11177 359 aa9.36□□□□□ -0.91
CCL13-202ENST00000577681 VCAM1P19320 739 aa9.36□□□□□ -0.91
CCL13-202ENST00000577681 HMGCS2P54868 508 aa9.36□□□□□ -0.91
CCL13-202ENST00000577681 PABPC4Q13310 644 aaKnown RBP eCLIP9.36□□□□□ -0.91
CCL13-202ENST00000577681 RABEP1Q15276 862 aa9.36□□□□□ -0.91
CCL13-202ENST00000577681 ANKRD1Q15327 319 aa9.36□□□□□ -0.91
CCL13-202ENST00000577681 NOM1Q5C9Z4 860 aaKnown RBP9.36□□□□□ -0.91
CCL13-202ENST00000577681 KIAA1755Q5JYT7 1200 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms