RNA–Protein interactions for RNA: ENST00000577664.5

CDK5RAP3-204, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 568 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-204ENST00000577664 RCSD1Q6JBY9 416 aa13.08□□□□□ -0.32
CDK5RAP3-204ENST00000577664 SIAH1Q8IUQ4 282 aa13.08□□□□□ -0.32
CDK5RAP3-204ENST00000577664 FAM43AQ8N2R8 423 aa13.08□□□□□ -0.32
CDK5RAP3-204ENST00000577664 MAFAQ8NHW3 353 aaPredicted RBP13.08□□□□□ -0.32
CDK5RAP3-204ENST00000577664 SNX21Q969T3 373 aa13.08□□□□□ -0.32
CDK5RAP3-204ENST00000577664 TRIM47Q96LD4 638 aa13.08□□□□□ -0.32
CDK5RAP3-204ENST00000577664 ZSCAN10Q96SZ4 725 aaPredicted RBP13.08□□□□□ -0.32
CDK5RAP3-204ENST00000577664 CABP5Q9NP86 173 aa13.08□□□□□ -0.32
CDK5RAP3-204ENST00000577664 SH2B2O14492 632 aaPredicted RBP13.07□□□□□ -0.32
CDK5RAP3-204ENST00000577664 CTGFP29279 349 aa13.07□□□□□ -0.32
CDK5RAP3-204ENST00000577664 MCM2P49736 904 aa13.07□□□□□ -0.32
CDK5RAP3-204ENST00000577664 RCAN1P53805 252 aa13.07□□□□□ -0.32
CDK5RAP3-204ENST00000577664 TOB2Q14106 344 aaPredicted RBP13.07□□□□□ -0.32
CDK5RAP3-204ENST00000577664 SART3Q15020 963 aaKnown RBP13.07□□□□□ -0.32
CDK5RAP3-204ENST00000577664 ANKRD1Q15327 319 aa13.07□□□□□ -0.32
CDK5RAP3-204ENST00000577664 FAM47AQ5JRC9 791 aa13.07□□□□□ -0.32
CDK5RAP3-204ENST00000577664 RRP12Q5JTH9 1297 aaKnown RBP13.07□□□□□ -0.32
CDK5RAP3-204ENST00000577664 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.07□□□□□ -0.32
CDK5RAP3-204ENST00000577664 SCYL3Q8IZE3 742 aa13.07□□□□□ -0.32
CDK5RAP3-204ENST00000577664 ENAHQ8N8S7 591 aaPredicted RBP13.07□□□□□ -0.32
CDK5RAP3-204ENST00000577664 SNX27Q96L92 541 aa13.07□□□□□ -0.32
CDK5RAP3-204ENST00000577664 MAP3K14Q99558 947 aa13.07□□□□□ -0.32
CDK5RAP3-204ENST00000577664 WDR18Q9BV38 432 aa13.07□□□□□ -0.32
CDK5RAP3-204ENST00000577664 PDRG1Q9NUG6 133 aa13.07□□□□□ -0.32
CDK5RAP3-204ENST00000577664 OTOFQ9HC10 1997 aa13.07□□□□□ -0.32
CDK5RAP3-204ENST00000577664 CCL15-CCL14A0A0B4J2E2 113 aa13.06□□□□□ -0.32
CDK5RAP3-204ENST00000577664 TTLL1O95922 423 aa13.06□□□□□ -0.32
CDK5RAP3-204ENST00000577664 GH2P01242 217 aa13.06□□□□□ -0.32
CDK5RAP3-204ENST00000577664 CPA1P15085 419 aa13.06□□□□□ -0.32
CDK5RAP3-204ENST00000577664 HOXD10P28358 340 aa13.06□□□□□ -0.32
CDK5RAP3-204ENST00000577664 INPP5BP32019 993 aa13.06□□□□□ -0.32
CDK5RAP3-204ENST00000577664 GTF2A2P52657 109 aa13.06□□□□□ -0.32
CDK5RAP3-204ENST00000577664 CCL15Q16663 113 aa13.06□□□□□ -0.32
CDK5RAP3-204ENST00000577664 STK11IPQ8N1F8 1099 aa13.06□□□□□ -0.32
CDK5RAP3-204ENST00000577664 OPTNQ96CV9 577 aa13.06□□□□□ -0.32
CDK5RAP3-204ENST00000577664 ZNF274Q96GC6 653 aaPredicted RBP13.06□□□□□ -0.32
CDK5RAP3-204ENST00000577664 CEP95Q96GE4 821 aa13.06□□□□□ -0.32
CDK5RAP3-204ENST00000577664 WRNIP1Q96S55 665 aa13.06□□□□□ -0.32
CDK5RAP3-204ENST00000577664 UPF3BQ9BZI7 483 aaKnown RBP13.06□□□□□ -0.32
CDK5RAP3-204ENST00000577664 CRISPLD2Q9H0B8 497 aa13.06□□□□□ -0.32
CDK5RAP3-204ENST00000577664 LY9Q9HBG7 655 aa13.06□□□□□ -0.32
CDK5RAP3-204ENST00000577664 TSHZ2Q9NRE2 1034 aa13.06□□□□□ -0.32
CDK5RAP3-204ENST00000577664 TOMM22Q9NS69 142 aa13.06□□□□□ -0.32
CDK5RAP3-204ENST00000577664 ZBTB21Q9ULJ3 1066 aa13.06□□□□□ -0.32
CDK5RAP3-204ENST00000577664 MYH8P13535 1937 aa13.05□□□□□ -0.32
CDK5RAP3-204ENST00000577664 ERICH2A1L162 156 aa13.05□□□□□ -0.32
CDK5RAP3-204ENST00000577664 USP17L5A8MUK1 530 aa13.05□□□□□ -0.32
CDK5RAP3-204ENST00000577664 IFIT3O14879 490 aaKnown RBP13.05□□□□□ -0.32
CDK5RAP3-204ENST00000577664 ST18O60284 1047 aa13.05□□□□□ -0.32
CDK5RAP3-204ENST00000577664 PTPRAP18433 802 aa13.05□□□□□ -0.32
CDK5RAP3-204ENST00000577664 OSBPP22059 807 aa13.05□□□□□ -0.32
CDK5RAP3-204ENST00000577664 SEPT2Q15019 361 aa13.05□□□□□ -0.32
CDK5RAP3-204ENST00000577664 PPP2R5BQ15173 497 aa13.05□□□□□ -0.32
CDK5RAP3-204ENST00000577664 TJAP1Q5JTD0 557 aa13.05□□□□□ -0.32
CDK5RAP3-204ENST00000577664 C17orf99Q6UX52 265 aa13.05□□□□□ -0.32
CDK5RAP3-204ENST00000577664 Q6ZUG5 572 aa13.05□□□□□ -0.32
CDK5RAP3-204ENST00000577664 CHST3Q7LGC8 479 aa13.05□□□□□ -0.32
CDK5RAP3-204ENST00000577664 RAET1EQ8TD07 263 aa13.05□□□□□ -0.32
CDK5RAP3-204ENST00000577664 UBAC1Q9BSL1 405 aa13.05□□□□□ -0.32
CDK5RAP3-204ENST00000577664 UBE2OQ9C0C9 1292 aaKnown RBP13.05□□□□□ -0.32
CDK5RAP3-204ENST00000577664 UNC93B1Q9H1C4 597 aa13.05□□□□□ -0.32
CDK5RAP3-204ENST00000577664 ZMYND8Q9ULU4 1186 aaPredicted RBP13.05□□□□□ -0.32
CDK5RAP3-204ENST00000577664 TNKSO95271 1327 aa13.05□□□□□ -0.32
CDK5RAP3-204ENST00000577664 TMEM265A0A087WTH1 108 aa13.04□□□□□ -0.32
CDK5RAP3-204ENST00000577664 NMT2O60551 498 aa13.04□□□□□ -0.32
CDK5RAP3-204ENST00000577664 TOP1P11387 765 aaKnown RBP13.04□□□□□ -0.32
CDK5RAP3-204ENST00000577664 AK2P54819 239 aa13.04□□□□□ -0.32
CDK5RAP3-204ENST00000577664 PPATQ06203 517 aa13.04□□□□□ -0.32
CDK5RAP3-204ENST00000577664 WTAPQ15007 396 aa13.04□□□□□ -0.32
CDK5RAP3-204ENST00000577664 TMEM67Q5HYA8 995 aa13.04□□□□□ -0.32
CDK5RAP3-204ENST00000577664 ZKSCAN4Q969J2 545 aaPredicted RBP13.04□□□□□ -0.32
CDK5RAP3-204ENST00000577664 PAWRQ96IZ0 340 aaKnown RBP13.04□□□□□ -0.32
CDK5RAP3-204ENST00000577664 CDX2Q99626 313 aaPredicted RBP13.04□□□□□ -0.32
CDK5RAP3-204ENST00000577664 TMEM47Q9BQJ4 181 aa13.04□□□□□ -0.32
CDK5RAP3-204ENST00000577664 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.04□□□□□ -0.32
CDK5RAP3-204ENST00000577664 TMX2Q9Y320 296 aa13.04□□□□□ -0.32
CDK5RAP3-204ENST00000577664 AFG3L2Q9Y4W6 797 aa13.04□□□□□ -0.32
CDK5RAP3-204ENST00000577664 SNCAIPQ9Y6H5 919 aa13.04□□□□□ -0.32
CDK5RAP3-204ENST00000577664 NCOR1O75376 2440 aa13.04□□□□□ -0.32
CDK5RAP3-204ENST00000577664 GDF11O95390 407 aa13.03□□□□□ -0.32
CDK5RAP3-204ENST00000577664 SNHG28P0DPA3 235 aa13.03□□□□□ -0.32
CDK5RAP3-204ENST00000577664 EEF2P13639 858 aaKnown RBP13.03□□□□□ -0.32
CDK5RAP3-204ENST00000577664 PSMC4P43686 418 aa13.03□□□□□ -0.32
CDK5RAP3-204ENST00000577664 TROAPQ12815 778 aa13.03□□□□□ -0.32
CDK5RAP3-204ENST00000577664 VGLL4Q14135 290 aa13.03□□□□□ -0.32
CDK5RAP3-204ENST00000577664 SHROOM1Q2M3G4 852 aaPredicted RBP13.03□□□□□ -0.32
CDK5RAP3-204ENST00000577664 IFIT1BQ5T764 474 aaKnown RBP13.03□□□□□ -0.32
CDK5RAP3-204ENST00000577664 NECAB2Q7Z6G3 386 aa13.03□□□□□ -0.32
CDK5RAP3-204ENST00000577664 ERO1BQ86YB8 467 aa13.03□□□□□ -0.32
CDK5RAP3-204ENST00000577664 C7orf61Q8IZ16 206 aa13.03□□□□□ -0.32
CDK5RAP3-204ENST00000577664 SLAIN1Q8ND83 568 aa13.03□□□□□ -0.32
CDK5RAP3-204ENST00000577664 GMCL1P1Q8NEA9 526 aa13.03□□□□□ -0.32
CDK5RAP3-204ENST00000577664 ZSCAN31Q96LW9 406 aaPredicted RBP13.03□□□□□ -0.32
CDK5RAP3-204ENST00000577664 ZKSCAN3Q9BRR0 538 aa13.03□□□□□ -0.32
CDK5RAP3-204ENST00000577664 KIAA1683Q9H0B3 1180 aa13.03□□□□□ -0.32
CDK5RAP3-204ENST00000577664 PAK6Q9NQU5 681 aaPredicted RBP13.03□□□□□ -0.32
CDK5RAP3-204ENST00000577664 LIMCH1Q9UPQ0 1083 aa13.03□□□□□ -0.32
CDK5RAP3-204ENST00000577664 CSADQ9Y600 493 aa13.03□□□□□ -0.32
CDK5RAP3-204ENST00000577664 ADGRA2Q96PE1 1338 aa13.03□□□□□ -0.32
CDK5RAP3-204ENST00000577664 NID2Q14112 1375 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms