RNA–Protein interactions for RNA: ENST00000575513.1

CIITA-210, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 2

Gene CIITA, Length 516 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-210ENST00000575513 CNNM2Q9H8M5 875 aa16.03■□□□□ 0.16
CIITA-210ENST00000575513 FEM1BQ9UK73 627 aa16.03■□□□□ 0.16
CIITA-210ENST00000575513 PPP1R9AQ9ULJ8 1098 aa16.03■□□□□ 0.16
CIITA-210ENST00000575513 GABRQQ9UN88 632 aa16.03■□□□□ 0.16
CIITA-210ENST00000575513 STX8Q9UNK0 236 aa16.03■□□□□ 0.16
CIITA-210ENST00000575513 U3KPZ7 1027 aaPredicted RBP16.03■□□□□ 0.16
CIITA-210ENST00000575513 RAD21O60216 631 aa16.02■□□□□ 0.16
CIITA-210ENST00000575513 PLA2G6O60733 806 aa16.02■□□□□ 0.16
CIITA-210ENST00000575513 ECM2O94769 699 aaPredicted RBP16.02■□□□□ 0.16
CIITA-210ENST00000575513 FDX1P10109 184 aa16.02■□□□□ 0.16
CIITA-210ENST00000575513 XRCC5P13010 732 aaKnown RBP16.02■□□□□ 0.16
CIITA-210ENST00000575513 SLFN13Q68D06 897 aa16.02■□□□□ 0.16
CIITA-210ENST00000575513 GPR142Q7Z601 462 aa16.02■□□□□ 0.16
CIITA-210ENST00000575513 PLEKHH3Q7Z736 793 aa16.02■□□□□ 0.16
CIITA-210ENST00000575513 NUDT12Q9BQG2 462 aa16.02■□□□□ 0.16
CIITA-210ENST00000575513 SLF1Q9BQI6 1058 aa16.02■□□□□ 0.16
CIITA-210ENST00000575513 KRT23Q9C075 422 aa16.02■□□□□ 0.16
CIITA-210ENST00000575513 SPATC1LQ9H0A9 340 aa16.02■□□□□ 0.16
CIITA-210ENST00000575513 PORCNQ9H237 461 aa16.02■□□□□ 0.16
CIITA-210ENST00000575513 VWA5AO00534 786 aa16.01■□□□□ 0.15
CIITA-210ENST00000575513 STRNO43815 780 aa16.01■□□□□ 0.15
CIITA-210ENST00000575513 ADCY3O60266 1144 aa16.01■□□□□ 0.15
CIITA-210ENST00000575513 NMT2O60551 498 aa16.01■□□□□ 0.15
CIITA-210ENST00000575513 PEX10O60683 326 aa16.01■□□□□ 0.15
CIITA-210ENST00000575513 TOP1P11387 765 aaKnown RBP16.01■□□□□ 0.15
CIITA-210ENST00000575513 BMP3P12645 472 aa16.01■□□□□ 0.15
CIITA-210ENST00000575513 PTH1RQ03431 593 aa16.01■□□□□ 0.15
CIITA-210ENST00000575513 MORN1Q5T089 497 aa16.01■□□□□ 0.15
CIITA-210ENST00000575513 RCSD1Q6JBY9 416 aa16.01■□□□□ 0.15
CIITA-210ENST00000575513 KIAA1211Q6ZU35 1233 aa16.01■□□□□ 0.15
CIITA-210ENST00000575513 IQCA1Q86XH1 822 aa16.01■□□□□ 0.15
CIITA-210ENST00000575513 DGKHQ86XP1 1220 aa16.01■□□□□ 0.15
CIITA-210ENST00000575513 TRMT44Q8IYL2 757 aaKnown RBP16.01■□□□□ 0.15
CIITA-210ENST00000575513 LRRC47Q8N1G4 583 aaKnown RBP16.01■□□□□ 0.15
CIITA-210ENST00000575513 USP6NLQ92738 828 aa16.01■□□□□ 0.15
CIITA-210ENST00000575513 ATG4CQ96DT6 458 aa16.01■□□□□ 0.15
CIITA-210ENST00000575513 MROH8Q9H579 483 aa16.01■□□□□ 0.15
CIITA-210ENST00000575513 FBXO28Q9NVF7 368 aa16.01■□□□□ 0.15
CIITA-210ENST00000575513 NEDD4P46934 1319 aa16■□□□□ 0.15
CIITA-210ENST00000575513 SLC15A5A6NIM6 579 aa16■□□□□ 0.15
CIITA-210ENST00000575513 ATP2A1O14983 1001 aa16■□□□□ 0.15
CIITA-210ENST00000575513 SLC25A27O95847 323 aa16■□□□□ 0.15
CIITA-210ENST00000575513 COPB2P35606 906 aa16■□□□□ 0.15
CIITA-210ENST00000575513 SLC1A4P43007 532 aa16■□□□□ 0.15
CIITA-210ENST00000575513 CASC1Q6TDU7 716 aa16■□□□□ 0.15
CIITA-210ENST00000575513 CHURC1Q8WUH1 139 aa16■□□□□ 0.15
CIITA-210ENST00000575513 ANKS1AQ92625 1134 aa16■□□□□ 0.15
CIITA-210ENST00000575513 NUP88Q99567 741 aaPredicted RBP16■□□□□ 0.15
CIITA-210ENST00000575513 ESYT1Q9BSJ8 1104 aa16■□□□□ 0.15
CIITA-210ENST00000575513 MOV10L1Q9BXT6 1211 aaKnown RBP16■□□□□ 0.15
CIITA-210ENST00000575513 KDM4AO75164 1064 aa15.99■□□□□ 0.15
CIITA-210ENST00000575513 CAPN2P17655 700 aa15.99■□□□□ 0.15
CIITA-210ENST00000575513 PTPREP23469 700 aa15.99■□□□□ 0.15
CIITA-210ENST00000575513 UBXN2AP68543 259 aa15.99■□□□□ 0.15
CIITA-210ENST00000575513 TMEM132BQ14DG7 1078 aa15.99■□□□□ 0.15
CIITA-210ENST00000575513 FAM160B2Q86V87 743 aa15.99■□□□□ 0.15
CIITA-210ENST00000575513 SKAP1Q86WV1 359 aa15.99■□□□□ 0.15
CIITA-210ENST00000575513 RIOX2Q8IUF8 465 aa15.99■□□□□ 0.15
CIITA-210ENST00000575513 ABRAQ8N0Z2 381 aa15.99■□□□□ 0.15
CIITA-210ENST00000575513 REPS2Q8NFH8 660 aa15.99■□□□□ 0.15
CIITA-210ENST00000575513 SH3TC2Q8TF17 1288 aa15.99■□□□□ 0.15
CIITA-210ENST00000575513 DCAF4Q8WV16 495 aa15.99■□□□□ 0.15
CIITA-210ENST00000575513 TMEM47Q9BQJ4 181 aa15.99■□□□□ 0.15
CIITA-210ENST00000575513 TMEM106CQ9BVX2 250 aa15.99■□□□□ 0.15
CIITA-210ENST00000575513 CWC22Q9HCG8 908 aaKnown RBP15.99■□□□□ 0.15
CIITA-210ENST00000575513 ZSWIM5Q9P217 1185 aa15.99■□□□□ 0.15
CIITA-210ENST00000575513 IVNS1ABPQ9Y6Y0 642 aa15.99■□□□□ 0.15
CIITA-210ENST00000575513 RLFQ13129 1914 aa15.98■□□□□ 0.15
CIITA-210ENST00000575513 MGAMO43451 1857 aa15.98■□□□□ 0.15
CIITA-210ENST00000575513 ZBED4O75132 1171 aa15.98■□□□□ 0.15
CIITA-210ENST00000575513 CYP21A2P08686 494 aa15.98■□□□□ 0.15
CIITA-210ENST00000575513 HOXC6P09630 235 aa15.98■□□□□ 0.15
CIITA-210ENST00000575513 ERCC3P19447 782 aa15.98■□□□□ 0.15
CIITA-210ENST00000575513 MCCP23508 829 aa15.98■□□□□ 0.15
CIITA-210ENST00000575513 STAT3P40763 770 aa15.98■□□□□ 0.15
CIITA-210ENST00000575513 RGS2P41220 211 aa15.98■□□□□ 0.15
CIITA-210ENST00000575513 STAT2P52630 851 aa15.98■□□□□ 0.15
CIITA-210ENST00000575513 OAZ1P54368 228 aa15.98■□□□□ 0.15
CIITA-210ENST00000575513 TRDNQ13061 729 aa15.98■□□□□ 0.15
CIITA-210ENST00000575513 GRB14Q14449 540 aa15.98■□□□□ 0.15
CIITA-210ENST00000575513 ZSCAN10Q96SZ4 725 aaPredicted RBP15.98■□□□□ 0.15
CIITA-210ENST00000575513 LSG1Q9H089 658 aaKnown RBP15.98■□□□□ 0.15
CIITA-210ENST00000575513 SLC38A10Q9HBR0 1119 aa15.98■□□□□ 0.15
CIITA-210ENST00000575513 ZNF214Q9UL59 606 aaPredicted RBP15.98■□□□□ 0.15
CIITA-210ENST00000575513 ZSWIM8A7E2V4 1837 aa15.98■□□□□ 0.15
CIITA-210ENST00000575513 CENPFP49454 3210 aa15.97■□□□□ 0.15
CIITA-210ENST00000575513 B4E1Z4 1266 aa15.97■□□□□ 0.15
CIITA-210ENST00000575513 TMEM232C9JQI7 657 aa15.97■□□□□ 0.15
CIITA-210ENST00000575513 CDC45O75419 566 aa15.97■□□□□ 0.15
CIITA-210ENST00000575513 MAP2K5Q13163 448 aa15.97■□□□□ 0.15
CIITA-210ENST00000575513 PLS1Q14651 629 aa15.97■□□□□ 0.15
CIITA-210ENST00000575513 TEX13BQ9BXU2 312 aa15.97■□□□□ 0.15
CIITA-210ENST00000575513 BIN2Q9UBW5 565 aaPredicted RBP15.97■□□□□ 0.15
CIITA-210ENST00000575513 HMGCRP04035 888 aa15.96■□□□□ 0.15
CIITA-210ENST00000575513 SNHG28P0DPA3 235 aa15.96■□□□□ 0.15
CIITA-210ENST00000575513 BTNL9Q6UXG8 535 aa15.96■□□□□ 0.15
CIITA-210ENST00000575513 NKX2-3Q8TAU0 364 aa15.96■□□□□ 0.15
CIITA-210ENST00000575513 KIFC2Q96AC6 838 aa15.96■□□□□ 0.15
CIITA-210ENST00000575513 APBA2Q99767 749 aa15.96■□□□□ 0.15
CIITA-210ENST00000575513 SLC5A4Q9NY91 659 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms