RNA–Protein interactions for RNA: ENST00000575338.1

SMG6-217, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-217ENST00000575338 TOB1P50616 345 aaPredicted RBP7.75□□□□□ -1.17
SMG6-217ENST00000575338 PLCD1P51178 756 aa7.75□□□□□ -1.17
SMG6-217ENST00000575338 ZNF75DP51815 510 aa7.75□□□□□ -1.17
SMG6-217ENST00000575338 NAPAP54920 295 aa7.75□□□□□ -1.17
SMG6-217ENST00000575338 ATP2C1P98194 919 aaPredicted RBP7.75□□□□□ -1.17
SMG6-217ENST00000575338 NR5A1Q13285 461 aa7.75□□□□□ -1.17
SMG6-217ENST00000575338 POSTNQ15063 836 aa7.75□□□□□ -1.17
SMG6-217ENST00000575338 CCDC93Q567U6 631 aa7.75□□□□□ -1.17
SMG6-217ENST00000575338 FOXP4Q8IVH2 680 aaPredicted RBP7.75□□□□□ -1.17
SMG6-217ENST00000575338 CMTR1Q8N1G2 835 aaKnown RBP7.75□□□□□ -1.17
SMG6-217ENST00000575338 IQUBQ8NA54 791 aa7.75□□□□□ -1.17
SMG6-217ENST00000575338 MLKLQ8NB16 471 aa7.75□□□□□ -1.17
SMG6-217ENST00000575338 UPF1Q92900 1129 aaKnown RBP eCLIP7.75□□□□□ -1.177e-6■■■■□ 22.8
SMG6-217ENST00000575338 SMARCE1Q969G3 411 aa7.75□□□□□ -1.17
SMG6-217ENST00000575338 CCDC47Q96A33 483 aaKnown RBP7.75□□□□□ -1.17
SMG6-217ENST00000575338 AK8Q96MA6 479 aa7.75□□□□□ -1.17
SMG6-217ENST00000575338 IDI2Q9BXS1 227 aa7.75□□□□□ -1.17
SMG6-217ENST00000575338 RAB34Q9BZG1 259 aa7.75□□□□□ -1.17
SMG6-217ENST00000575338 ZMYND12Q9H0C1 365 aa7.75□□□□□ -1.17
SMG6-217ENST00000575338 MAGEF1Q9HAY2 307 aa7.75□□□□□ -1.17
SMG6-217ENST00000575338 RTN4Q9NQC3 1192 aaKnown RBP7.75□□□□□ -1.17
SMG6-217ENST00000575338 RMND1Q9NWS8 449 aa7.75□□□□□ -1.17
SMG6-217ENST00000575338 PI4KBQ9UBF8 816 aa7.75□□□□□ -1.17
SMG6-217ENST00000575338 SYNPO2Q9UMS6 1093 aa7.75□□□□□ -1.17
SMG6-217ENST00000575338 PCDHB6Q9Y5E3 794 aa7.75□□□□□ -1.17
SMG6-217ENST00000575338 BAZ2BQ9UIF8 2168 aaKnown RBP7.74□□□□□ -1.17
SMG6-217ENST00000575338 SCN9AQ15858 1988 aa7.74□□□□□ -1.17
SMG6-217ENST00000575338 F8W031 263 aaPredicted RBP7.74□□□□□ -1.17
SMG6-217ENST00000575338 POLR2DO15514 142 aaKnown RBP7.74□□□□□ -1.17
SMG6-217ENST00000575338 ECE2O60344 883 aa7.74□□□□□ -1.17
SMG6-217ENST00000575338 NMT2O60551 498 aa7.74□□□□□ -1.17
SMG6-217ENST00000575338 ENTPD3O75355 529 aa7.74□□□□□ -1.17
SMG6-217ENST00000575338 SLFN14P0C7P3 912 aa7.74□□□□□ -1.17
SMG6-217ENST00000575338 PPP1R2P41236 205 aa7.74□□□□□ -1.17
SMG6-217ENST00000575338 MYL5Q02045 173 aa7.74□□□□□ -1.17
SMG6-217ENST00000575338 GABPAQ06546 454 aa7.74□□□□□ -1.17
SMG6-217ENST00000575338 PICALMQ13492 652 aa7.74□□□□□ -1.17
SMG6-217ENST00000575338 NONOQ15233 471 aaKnown RBP eCLIP7.74□□□□□ -1.17
SMG6-217ENST00000575338 GRIK5Q16478 980 aa7.74□□□□□ -1.17
SMG6-217ENST00000575338 DOK7Q18PE1 504 aa7.74□□□□□ -1.17
SMG6-217ENST00000575338 NT5DC1Q5TFE4 455 aa7.74□□□□□ -1.17
SMG6-217ENST00000575338 DTHD1Q6ZMT9 781 aa7.74□□□□□ -1.17
SMG6-217ENST00000575338 PIK3AP1Q6ZUJ8 805 aa7.74□□□□□ -1.17
SMG6-217ENST00000575338 HEATR3Q7Z4Q2 680 aa7.74□□□□□ -1.17
SMG6-217ENST00000575338 AOPEPQ8N6M6 819 aa7.74□□□□□ -1.17
SMG6-217ENST00000575338 PIBF1Q8WXW3 757 aa7.74□□□□□ -1.17
SMG6-217ENST00000575338 TNFRSF25Q93038 417 aa7.74□□□□□ -1.17
SMG6-217ENST00000575338 CEP95Q96GE4 821 aa7.74□□□□□ -1.17
SMG6-217ENST00000575338 GSDMAQ96QA5 445 aa7.74□□□□□ -1.17
SMG6-217ENST00000575338 CUEDC2Q9H467 287 aa7.74□□□□□ -1.17
SMG6-217ENST00000575338 MTMR4Q9NYA4 1195 aa7.74□□□□□ -1.17
SMG6-217ENST00000575338 CLIP2Q9UDT6 1046 aa7.74□□□□□ -1.17
SMG6-217ENST00000575338 STXBP3O00186 592 aa7.73□□□□□ -1.17
SMG6-217ENST00000575338 CCP110O43303 1012 aa7.73□□□□□ -1.17
SMG6-217ENST00000575338 OFD1O75665 1012 aa7.73□□□□□ -1.17
SMG6-217ENST00000575338 SNHG28P0DPA3 235 aa7.73□□□□□ -1.17
SMG6-217ENST00000575338 ATP2B1P20020 1258 aa7.73□□□□□ -1.17
SMG6-217ENST00000575338 RBM5P52756 815 aaKnown RBP eCLIP7.73□□□□□ -1.17
SMG6-217ENST00000575338 PTGDRQ13258 359 aa7.73□□□□□ -1.17
SMG6-217ENST00000575338 DNTTIP2Q5QJE6 756 aaKnown RBP7.73□□□□□ -1.17
SMG6-217ENST00000575338 DACT2Q5SW24 774 aa7.73□□□□□ -1.17
SMG6-217ENST00000575338 CDC42EP5Q6NZY7 148 aa7.73□□□□□ -1.17
SMG6-217ENST00000575338 C11orf57Q6ZUT1 292 aaPredicted RBP7.73□□□□□ -1.17
SMG6-217ENST00000575338 TMEM179Q6ZVK1 233 aa7.73□□□□□ -1.17
SMG6-217ENST00000575338 DHX40Q8IX18 779 aaKnown RBP7.73□□□□□ -1.17
SMG6-217ENST00000575338 REXO1Q8N1G1 1221 aaKnown RBP7.73□□□□□ -1.17
SMG6-217ENST00000575338 OGFOD1Q8N543 542 aa7.73□□□□□ -1.17
SMG6-217ENST00000575338 TTLL6Q8N841 843 aa7.73□□□□□ -1.17
SMG6-217ENST00000575338 CCDC150Q8NCX0 1101 aa7.73□□□□□ -1.17
SMG6-217ENST00000575338 OXER1Q8TDS5 423 aa7.73□□□□□ -1.17
SMG6-217ENST00000575338 DCAF4Q8WV16 495 aa7.73□□□□□ -1.17
SMG6-217ENST00000575338 CLIC6Q96NY7 704 aa7.73□□□□□ -1.17
SMG6-217ENST00000575338 CAMKK2Q96RR4 588 aa7.73□□□□□ -1.17
SMG6-217ENST00000575338 PSMD1Q99460 953 aa7.73□□□□□ -1.17
SMG6-217ENST00000575338 CSRNP2Q9H175 543 aa7.73□□□□□ -1.17
SMG6-217ENST00000575338 RIOX1Q9H6W3 641 aa7.73□□□□□ -1.17
SMG6-217ENST00000575338 KANSL2Q9H9L4 492 aa7.73□□□□□ -1.17
SMG6-217ENST00000575338 ANO8Q9HCE9 1232 aaPredicted RBP7.73□□□□□ -1.17
SMG6-217ENST00000575338 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.73□□□□□ -1.17
SMG6-217ENST00000575338 ADAMTSL1Q8N6G6 1762 aa7.73□□□□□ -1.17
SMG6-217ENST00000575338 SIPA1L1O43166 1804 aa7.73□□□□□ -1.17
SMG6-217ENST00000575338 ATRNL1Q5VV63 1379 aa7.72□□□□□ -1.17
SMG6-217ENST00000575338 IGKV6D-41A0A0C4DH26 115 aa7.72□□□□□ -1.17
SMG6-217ENST00000575338 VWA3AA6NCI4 1184 aa7.72□□□□□ -1.17
SMG6-217ENST00000575338 SMCO2A6NFE2 343 aa7.72□□□□□ -1.17
SMG6-217ENST00000575338 SMIM22K7EJ46 135 aa7.72□□□□□ -1.17
SMG6-217ENST00000575338 MPHOSPH10O00566 681 aaKnown RBP7.72□□□□□ -1.17
SMG6-217ENST00000575338 PPIP5K2O43314 1243 aa7.72□□□□□ -1.17
SMG6-217ENST00000575338 SLC26A4O43511 780 aa7.72□□□□□ -1.17
SMG6-217ENST00000575338 PDHBP11177 359 aa7.72□□□□□ -1.17
SMG6-217ENST00000575338 ERCC5P28715 1186 aaPredicted RBP7.72□□□□□ -1.17
SMG6-217ENST00000575338 UBA7P41226 1012 aa7.72□□□□□ -1.17
SMG6-217ENST00000575338 MRPL12P52815 198 aaKnown RBP7.72□□□□□ -1.17
SMG6-217ENST00000575338 TMEM266Q2M3C6 531 aa7.72□□□□□ -1.17
SMG6-217ENST00000575338 SLC4A8Q2Y0W8 1093 aa7.72□□□□□ -1.17
SMG6-217ENST00000575338 DPCR1Q3MIW9 517 aa7.72□□□□□ -1.17
SMG6-217ENST00000575338 LONRF3Q496Y0 759 aa7.72□□□□□ -1.17
SMG6-217ENST00000575338 MSL1Q68DK7 614 aa7.72□□□□□ -1.17
SMG6-217ENST00000575338 WWC2Q6AWC2 1192 aa7.72□□□□□ -1.17
SMG6-217ENST00000575338 APOBEC3HQ6NTF7 200 aaKnown RBP7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms