RNA–Protein interactions for RNA: ENST00000575116.1

PRPF8-212, Transcript of pre-mRNA processing factor 8, human

TSL 3

Gene PRPF8, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRPF8-212	ENST00000575116	FOXD4L1	Q9NU39	408 aa		13.83	□□□□□ -0.2
PRPF8-212	ENST00000575116	RBM27	Q9P2N5	1060 aa	Known RBP	13.83	□□□□□ -0.2
PRPF8-212	ENST00000575116	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	13.83	□□□□□ -0.2
PRPF8-212	ENST00000575116	STK36	Q9NRP7	1315 aa		13.83	□□□□□ -0.2
PRPF8-212	ENST00000575116	TRPM7	Q96QT4	1865 aa		13.82	□□□□□ -0.2
PRPF8-212	ENST00000575116	SPDYE5	A6NIY4	337 aa		13.82	□□□□□ -0.2
PRPF8-212	ENST00000575116	UBE2Q2L	H0YL09	131 aa		13.82	□□□□□ -0.2
PRPF8-212	ENST00000575116	CXCL11	O14625	94 aa		13.82	□□□□□ -0.2
PRPF8-212	ENST00000575116	PLA2G6	O60733	806 aa		13.82	□□□□□ -0.2
PRPF8-212	ENST00000575116	NDUFB10	O96000	172 aa		13.82	□□□□□ -0.2
PRPF8-212	ENST00000575116	BMP3	P12645	472 aa		13.82	□□□□□ -0.2
PRPF8-212	ENST00000575116	PDC	P20941	246 aa		13.82	□□□□□ -0.2
PRPF8-212	ENST00000575116	YY1	P25490	414 aa		13.82	□□□□□ -0.2
PRPF8-212	ENST00000575116	DDIT3	P35638	169 aa		13.82	□□□□□ -0.2
PRPF8-212	ENST00000575116	FMR1	Q06787	632 aa	Known RBP eCLIP	13.82	□□□□□ -0.2	2e-8	■■□□□ 13.6
PRPF8-212	ENST00000575116	SPP2	Q13103	211 aa		13.82	□□□□□ -0.2
PRPF8-212	ENST00000575116	SH3D19	Q5HYK7	790 aa		13.82	□□□□□ -0.2
PRPF8-212	ENST00000575116	MOB2	Q70IA6	237 aa		13.82	□□□□□ -0.2
PRPF8-212	ENST00000575116	SRBD1	Q8N5C6	995 aa	Known RBP	13.82	□□□□□ -0.2
PRPF8-212	ENST00000575116	WASF1	Q92558	559 aa		13.82	□□□□□ -0.2
PRPF8-212	ENST00000575116	SLC10A4	Q96EP9	437 aa		13.82	□□□□□ -0.2
PRPF8-212	ENST00000575116	C12orf42	Q96LP6	360 aa		13.82	□□□□□ -0.2
PRPF8-212	ENST00000575116	ORC3	Q9UBD5	711 aa	Predicted RBP	13.82	□□□□□ -0.2
PRPF8-212	ENST00000575116	CIZ1	Q9ULV3	898 aa	Predicted RBP	13.82	□□□□□ -0.2
PRPF8-212	ENST00000575116	MTMR7	Q9Y216	660 aa		13.82	□□□□□ -0.2
PRPF8-212	ENST00000575116	PHIP	Q8WWQ0	1821 aa		13.82	□□□□□ -0.2
PRPF8-212	ENST00000575116	OTOF	Q9HC10	1997 aa		13.82	□□□□□ -0.2
PRPF8-212	ENST00000575116	JAK2	O60674	1132 aa		13.81	□□□□□ -0.2
PRPF8-212	ENST00000575116	PLEKHA8P1	O95397	391 aa		13.81	□□□□□ -0.2
PRPF8-212	ENST00000575116	DEXI	O95424	95 aa		13.81	□□□□□ -0.2
PRPF8-212	ENST00000575116	FDPS	P14324	419 aa	Known RBP	13.81	□□□□□ -0.2
PRPF8-212	ENST00000575116	AKAP17A	Q02040	695 aa	Known RBP	13.81	□□□□□ -0.2
PRPF8-212	ENST00000575116	CCDC96	Q2M329	555 aa		13.81	□□□□□ -0.2
PRPF8-212	ENST00000575116	CST9	Q5W186	159 aa		13.81	□□□□□ -0.2
PRPF8-212	ENST00000575116	BTNL9	Q6UXG8	535 aa		13.81	□□□□□ -0.2
PRPF8-212	ENST00000575116	CCDC84	Q86UT8	332 aa	Predicted RBP	13.81	□□□□□ -0.2
PRPF8-212	ENST00000575116	FAM184A	Q8NB25	1140 aa		13.81	□□□□□ -0.2
PRPF8-212	ENST00000575116	RIOX1	Q9H6W3	641 aa		13.81	□□□□□ -0.2
PRPF8-212	ENST00000575116	ELP3	Q9H9T3	547 aa		13.81	□□□□□ -0.2
PRPF8-212	ENST00000575116	PASK	Q96RG2	1323 aa		13.81	□□□□□ -0.2
PRPF8-212	ENST00000575116	WDR46	O15213	610 aa	Known RBP	13.8	□□□□□ -0.2
PRPF8-212	ENST00000575116	RAD21	O60216	631 aa		13.8	□□□□□ -0.2
PRPF8-212	ENST00000575116	GOLGA8H	P0CJ92	632 aa		13.8	□□□□□ -0.2
PRPF8-212	ENST00000575116	FSTL1	Q12841	308 aa		13.8	□□□□□ -0.2
PRPF8-212	ENST00000575116	PPIL2	Q13356	520 aa		13.8	□□□□□ -0.2
PRPF8-212	ENST00000575116	MTMR2	Q13614	643 aa		13.8	□□□□□ -0.2
PRPF8-212	ENST00000575116	KIAA1755	Q5JYT7	1200 aa		13.8	□□□□□ -0.2
PRPF8-212	ENST00000575116	FAM160B2	Q86V87	743 aa		13.8	□□□□□ -0.2
PRPF8-212	ENST00000575116	CHURC1	Q8WUH1	139 aa		13.8	□□□□□ -0.2
PRPF8-212	ENST00000575116	CLMN	Q96JQ2	1002 aa		13.8	□□□□□ -0.2
PRPF8-212	ENST00000575116	SLC26A6	Q9BXS9	759 aa		13.8	□□□□□ -0.2
PRPF8-212	ENST00000575116	GPCPD1	Q9NPB8	672 aa		13.8	□□□□□ -0.2
PRPF8-212	ENST00000575116	EMILIN3	Q9NT22	766 aa		13.8	□□□□□ -0.2
PRPF8-212	ENST00000575116	FEM1B	Q9UK73	627 aa		13.8	□□□□□ -0.2
PRPF8-212	ENST00000575116	KCNH4	Q9UQ05	1017 aa		13.8	□□□□□ -0.2
PRPF8-212	ENST00000575116		V9GY48	417 aa	Predicted RBP	13.8	□□□□□ -0.2
PRPF8-212	ENST00000575116	CNTNAP5	Q8WYK1	1306 aa		13.8	□□□□□ -0.2
PRPF8-212	ENST00000575116	TRIM75P	A6NK02	468 aa		13.79	□□□□□ -0.2
PRPF8-212	ENST00000575116	LARP1B	Q659C4	914 aa	Known RBP	13.79	□□□□□ -0.2
PRPF8-212	ENST00000575116	KCTD1	Q719H9	257 aa		13.79	□□□□□ -0.2
PRPF8-212	ENST00000575116	FAM177A1	Q8N128	213 aa	Predicted RBP	13.79	□□□□□ -0.2
PRPF8-212	ENST00000575116	CMTR1	Q8N1G2	835 aa	Known RBP	13.79	□□□□□ -0.2
PRPF8-212	ENST00000575116	CCDC82	Q8N4S0	544 aa		13.79	□□□□□ -0.2
PRPF8-212	ENST00000575116	PHKB	Q93100	1093 aa		13.79	□□□□□ -0.2
PRPF8-212	ENST00000575116	DDX11	Q96FC9	970 aa		13.79	□□□□□ -0.2
PRPF8-212	ENST00000575116	TMOD4	Q9NZQ9	345 aa		13.79	□□□□□ -0.2
PRPF8-212	ENST00000575116	CHMP5	Q9NZZ3	219 aa		13.79	□□□□□ -0.2
PRPF8-212	ENST00000575116	FRMPD2	Q68DX3	1309 aa	Predicted RBP	13.79	□□□□□ -0.2
PRPF8-212	ENST00000575116	TMEM232	C9JQI7	657 aa		13.78	□□□□□ -0.2
PRPF8-212	ENST00000575116	hCG_1984214	I3L0E3	225 aa		13.78	□□□□□ -0.2
PRPF8-212	ENST00000575116	CYTH3	O43739	400 aa		13.78	□□□□□ -0.2
PRPF8-212	ENST00000575116	STAT2	P52630	851 aa		13.78	□□□□□ -0.2
PRPF8-212	ENST00000575116	NUCB2	P80303	420 aa		13.78	□□□□□ -0.2
PRPF8-212	ENST00000575116	ZYX	Q15942	572 aa	Known RBP	13.78	□□□□□ -0.2
PRPF8-212	ENST00000575116	FAM83B	Q5T0W9	1011 aa		13.78	□□□□□ -0.2
PRPF8-212	ENST00000575116	TTBK2	Q6IQ55	1244 aa		13.78	□□□□□ -0.2
PRPF8-212	ENST00000575116	RASGRP2	Q7LDG7	609 aa		13.78	□□□□□ -0.2
PRPF8-212	ENST00000575116	ADGRF4	Q8IZF3	695 aa		13.78	□□□□□ -0.2
PRPF8-212	ENST00000575116	SPICE1	Q8N0Z3	855 aa		13.78	□□□□□ -0.2
PRPF8-212	ENST00000575116	ZNF713	Q8N859	430 aa	Predicted RBP	13.78	□□□□□ -0.2
PRPF8-212	ENST00000575116	ZNF784	Q8NCA9	323 aa	Predicted RBP	13.78	□□□□□ -0.2
PRPF8-212	ENST00000575116	PROCA1	Q8NCQ7	364 aa	Predicted RBP	13.78	□□□□□ -0.2
PRPF8-212	ENST00000575116	OPTN	Q96CV9	577 aa		13.78	□□□□□ -0.2
PRPF8-212	ENST00000575116	MTMR8	Q96EF0	704 aa		13.78	□□□□□ -0.2
PRPF8-212	ENST00000575116	RRP36	Q96EU6	259 aa	Known RBP	13.78	□□□□□ -0.2
PRPF8-212	ENST00000575116	OTUD5	Q96G74	571 aa		13.78	□□□□□ -0.2
PRPF8-212	ENST00000575116	UBA5	Q9GZZ9	404 aa		13.78	□□□□□ -0.2
PRPF8-212	ENST00000575116		A0A0G2JLL6	359 aa	Predicted RBP	13.77	□□□□□ -0.21
PRPF8-212	ENST00000575116	IRF6	O14896	467 aa		13.77	□□□□□ -0.21
PRPF8-212	ENST00000575116	FDX1	P10109	184 aa		13.77	□□□□□ -0.21
PRPF8-212	ENST00000575116	SCG2	P13521	617 aa		13.77	□□□□□ -0.21
PRPF8-212	ENST00000575116	XBP1	P17861	261 aa		13.77	□□□□□ -0.21
PRPF8-212	ENST00000575116	VCAM1	P19320	739 aa		13.77	□□□□□ -0.21
PRPF8-212	ENST00000575116	SYT1	P21579	422 aa		13.77	□□□□□ -0.21
PRPF8-212	ENST00000575116	HMGCS2	P54868	508 aa		13.77	□□□□□ -0.21
PRPF8-212	ENST00000575116	PKN1	Q16512	942 aa		13.77	□□□□□ -0.21
PRPF8-212	ENST00000575116	PFKFB3	Q16875	520 aa	Predicted RBP	13.77	□□□□□ -0.21
PRPF8-212	ENST00000575116	SLC35G1	Q2M3R5	365 aa		13.77	□□□□□ -0.21
PRPF8-212	ENST00000575116	SYDE2	Q5VT97	1194 aa		13.77	□□□□□ -0.21
PRPF8-212	ENST00000575116	FASTKD5	Q7L8L6	764 aa	Known RBP	13.77	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 106.4 ms